BLASTX nr result
ID: Ophiopogon23_contig00005113
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00005113
(422 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020248702.1| pre-mRNA-processing factor 39 isoform X2 [As... 89 1e-17
ref|XP_020248699.1| pre-mRNA-processing factor 39 isoform X1 [As... 89 1e-17
ref|XP_021633230.1| pre-mRNA-processing factor 39 isoform X2 [Ma... 63 9e-09
ref|XP_021633228.1| pre-mRNA-processing factor 39 isoform X1 [Ma... 60 1e-07
gb|PKA53850.1| hypothetical protein AXF42_Ash011330 [Apostasia s... 59 3e-07
gb|EOX94328.1| Tetratricopeptide repeat (TPR)-like superfamily p... 58 6e-07
ref|XP_021279924.1| pre-mRNA-processing factor 39 isoform X2 [He... 58 6e-07
ref|XP_007050169.2| PREDICTED: pre-mRNA-processing factor 39 [Th... 58 6e-07
gb|EOX94326.1| Tetratricopeptide repeat (TPR)-like superfamily p... 58 6e-07
ref|XP_021279921.1| pre-mRNA-processing factor 39 isoform X1 [He... 58 6e-07
ref|XP_020539082.1| pre-mRNA-processing factor 39 isoform X3 [Ja... 57 8e-07
ref|XP_020539081.1| pre-mRNA-processing factor 39 isoform X2 [Ja... 57 9e-07
ref|XP_012085230.1| pre-mRNA-processing factor 39 isoform X1 [Ja... 57 9e-07
gb|PIA36235.1| hypothetical protein AQUCO_03400267v1 [Aquilegia ... 57 2e-06
gb|PIA36236.1| hypothetical protein AQUCO_03400267v1 [Aquilegia ... 57 2e-06
ref|XP_022728463.1| pre-mRNA-processing factor 39-like isoform X... 56 2e-06
ref|XP_022728462.1| pre-mRNA-processing factor 39-like isoform X... 56 2e-06
ref|XP_022758531.1| pre-mRNA-processing factor 39-like isoform X... 56 2e-06
ref|XP_022758530.1| pre-mRNA-processing factor 39-like isoform X... 56 2e-06
ref|XP_022758529.1| pre-mRNA-processing factor 39-like isoform X... 56 2e-06
>ref|XP_020248702.1| pre-mRNA-processing factor 39 isoform X2 [Asparagus officinalis]
Length = 566
Score = 88.6 bits (218), Expect = 1e-17
Identities = 55/134 (41%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGYA----XXXXXXXXXXXXXX 169
AEDFLAAD KVSRT+TDAASS SVVGAYPNA++QWT+ Y+
Sbjct: 433 AEDFLAADSAKVSRTTTDAASSGQSVVGAYPNAQSQWTASYSQRAPWPQNPQAQGQQWNP 492
Query: 170 XXXXXXXXXXXXXXXPQIPMPTSAPQXXXXXXXXXXXXXXXXXXXXXXXXXSPAVATYP- 346
PQ PMP+SAPQ + A TYP
Sbjct: 493 GYAPQAAYTAYGYAPPQAPMPSSAPQTAAAYGSYPPSYAAQAYPQQNYAQPAAAATTYPQ 552
Query: 347 QQGSAPPQYYGSYY 388
QQG+A YYGSYY
Sbjct: 553 QQGTAAAAYYGSYY 566
>ref|XP_020248699.1| pre-mRNA-processing factor 39 isoform X1 [Asparagus officinalis]
ref|XP_020248700.1| pre-mRNA-processing factor 39 isoform X1 [Asparagus officinalis]
ref|XP_020248701.1| pre-mRNA-processing factor 39 isoform X1 [Asparagus officinalis]
gb|ONK57321.1| uncharacterized protein A4U43_C10F18870 [Asparagus officinalis]
Length = 817
Score = 88.6 bits (218), Expect = 1e-17
Identities = 55/134 (41%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGYA----XXXXXXXXXXXXXX 169
AEDFLAAD KVSRT+TDAASS SVVGAYPNA++QWT+ Y+
Sbjct: 684 AEDFLAADSAKVSRTTTDAASSGQSVVGAYPNAQSQWTASYSQRAPWPQNPQAQGQQWNP 743
Query: 170 XXXXXXXXXXXXXXXPQIPMPTSAPQXXXXXXXXXXXXXXXXXXXXXXXXXSPAVATYP- 346
PQ PMP+SAPQ + A TYP
Sbjct: 744 GYAPQAAYTAYGYAPPQAPMPSSAPQTAAAYGSYPPSYAAQAYPQQNYAQPAAAATTYPQ 803
Query: 347 QQGSAPPQYYGSYY 388
QQG+A YYGSYY
Sbjct: 804 QQGTAAAAYYGSYY 817
>ref|XP_021633230.1| pre-mRNA-processing factor 39 isoform X2 [Manihot esculenta]
Length = 833
Score = 63.2 bits (152), Expect = 9e-09
Identities = 44/138 (31%), Positives = 55/138 (39%), Gaps = 9/138 (6%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGYA------XXXXXXXXXXXX 163
AED+LA+DKTK++++ DA SS+ S++GAYPN +NQW +GY
Sbjct: 698 AEDYLASDKTKLAKSYADAPSSAQSLMGAYPNVQNQWATGYGLQPQAWPPVTQAQTPGYG 757
Query: 164 XXXXXXXXXXXXXXXXXPQIPMPTSAPQXXXXXXXXXXXXXXXXXXXXXXXXXSPAVATY 343
PQ PTS PQ PA AT
Sbjct: 758 QQTAYGTYGGYGSNYTNPQ--APTSVPQTAAYGAYPPTYPVQAYPQQGYPQAQPPAAATL 815
Query: 344 ---PQQGSAPPQYYGSYY 388
Q S P YYGSYY
Sbjct: 816 APAQQPASVPQPYYGSYY 833
>ref|XP_021633228.1| pre-mRNA-processing factor 39 isoform X1 [Manihot esculenta]
ref|XP_021633229.1| pre-mRNA-processing factor 39 isoform X1 [Manihot esculenta]
gb|OAY32712.1| hypothetical protein MANES_13G040100 [Manihot esculenta]
Length = 834
Score = 59.7 bits (143), Expect = 1e-07
Identities = 24/41 (58%), Positives = 35/41 (85%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGY 124
AED+LA+DKTK++++ DA SS+ S++GAYPN +NQW +GY
Sbjct: 698 AEDYLASDKTKLAKSYADAPSSAQSLMGAYPNVQNQWATGY 738
>gb|PKA53850.1| hypothetical protein AXF42_Ash011330 [Apostasia shenzhenica]
Length = 830
Score = 58.5 bits (140), Expect = 3e-07
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGY 124
AED ++++KTK++RT T A S + SV+GAYPNA+NQWTS Y
Sbjct: 690 AEDLVSSEKTKMARTYTSAPSPTQSVMGAYPNAQNQWTSSY 730
>gb|EOX94328.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 3
[Theobroma cacao]
Length = 538
Score = 57.8 bits (138), Expect = 6e-07
Identities = 24/42 (57%), Positives = 35/42 (83%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGYA 127
AEDFL++DKTK++++ + A S S++GAYPNA+NQW +GYA
Sbjct: 398 AEDFLSSDKTKLAKSYSGAPSPGQSLMGAYPNAQNQWPAGYA 439
>ref|XP_021279924.1| pre-mRNA-processing factor 39 isoform X2 [Herrania umbratica]
Length = 540
Score = 57.8 bits (138), Expect = 6e-07
Identities = 24/42 (57%), Positives = 35/42 (83%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGYA 127
AEDFL++DKTK++++ + A S S++GAYPNA+NQW +GYA
Sbjct: 398 AEDFLSSDKTKLAKSYSGAPSPGQSLMGAYPNAQNQWPAGYA 439
>ref|XP_007050169.2| PREDICTED: pre-mRNA-processing factor 39 [Theobroma cacao]
ref|XP_007050170.2| PREDICTED: pre-mRNA-processing factor 39 [Theobroma cacao]
Length = 815
Score = 57.8 bits (138), Expect = 6e-07
Identities = 24/42 (57%), Positives = 35/42 (83%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGYA 127
AEDFL++DKTK++++ + A S S++GAYPNA+NQW +GYA
Sbjct: 675 AEDFLSSDKTKLAKSYSGAPSPGQSLMGAYPNAQNQWPAGYA 716
>gb|EOX94326.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 1 [Theobroma cacao]
gb|EOX94327.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 1 [Theobroma cacao]
Length = 815
Score = 57.8 bits (138), Expect = 6e-07
Identities = 24/42 (57%), Positives = 35/42 (83%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGYA 127
AEDFL++DKTK++++ + A S S++GAYPNA+NQW +GYA
Sbjct: 675 AEDFLSSDKTKLAKSYSGAPSPGQSLMGAYPNAQNQWPAGYA 716
>ref|XP_021279921.1| pre-mRNA-processing factor 39 isoform X1 [Herrania umbratica]
ref|XP_021279922.1| pre-mRNA-processing factor 39 isoform X1 [Herrania umbratica]
ref|XP_021279923.1| pre-mRNA-processing factor 39 isoform X1 [Herrania umbratica]
Length = 817
Score = 57.8 bits (138), Expect = 6e-07
Identities = 24/42 (57%), Positives = 35/42 (83%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGYA 127
AEDFL++DKTK++++ + A S S++GAYPNA+NQW +GYA
Sbjct: 675 AEDFLSSDKTKLAKSYSGAPSPGQSLMGAYPNAQNQWPAGYA 716
>ref|XP_020539082.1| pre-mRNA-processing factor 39 isoform X3 [Jatropha curcas]
Length = 542
Score = 57.4 bits (137), Expect = 8e-07
Identities = 23/41 (56%), Positives = 35/41 (85%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGY 124
AED+LA+DKTK++++ DA+S + S++GAYP A+NQWT+ Y
Sbjct: 401 AEDYLASDKTKLAKSYADASSPAQSLMGAYPTAQNQWTASY 441
>ref|XP_020539081.1| pre-mRNA-processing factor 39 isoform X2 [Jatropha curcas]
gb|KDP26468.1| hypothetical protein JCGZ_17626 [Jatropha curcas]
Length = 838
Score = 57.4 bits (137), Expect = 9e-07
Identities = 23/41 (56%), Positives = 35/41 (85%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGY 124
AED+LA+DKTK++++ DA+S + S++GAYP A+NQWT+ Y
Sbjct: 698 AEDYLASDKTKLAKSYADASSPAQSLMGAYPTAQNQWTASY 738
>ref|XP_012085230.1| pre-mRNA-processing factor 39 isoform X1 [Jatropha curcas]
ref|XP_020539080.1| pre-mRNA-processing factor 39 isoform X1 [Jatropha curcas]
Length = 839
Score = 57.4 bits (137), Expect = 9e-07
Identities = 23/41 (56%), Positives = 35/41 (85%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGY 124
AED+LA+DKTK++++ DA+S + S++GAYP A+NQWT+ Y
Sbjct: 698 AEDYLASDKTKLAKSYADASSPAQSLMGAYPTAQNQWTASY 738
>gb|PIA36235.1| hypothetical protein AQUCO_03400267v1 [Aquilegia coerulea]
Length = 813
Score = 56.6 bits (135), Expect = 2e-06
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGY 124
AEDFLA+DKTK++++ T S + SV+G YPN +NQW +GY
Sbjct: 670 AEDFLASDKTKLAKSYTSVPSPAQSVMGTYPNTQNQWAAGY 710
>gb|PIA36236.1| hypothetical protein AQUCO_03400267v1 [Aquilegia coerulea]
Length = 814
Score = 56.6 bits (135), Expect = 2e-06
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGY 124
AEDFLA+DKTK++++ T S + SV+G YPN +NQW +GY
Sbjct: 670 AEDFLASDKTKLAKSYTSVPSPAQSVMGTYPNTQNQWAAGY 710
>ref|XP_022728463.1| pre-mRNA-processing factor 39-like isoform X3 [Durio zibethinus]
Length = 534
Score = 56.2 bits (134), Expect = 2e-06
Identities = 23/42 (54%), Positives = 35/42 (83%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGYA 127
AEDFLA++KTK++++ + A S S++GAYPNA+NQW +GY+
Sbjct: 398 AEDFLASEKTKLAKSYSGAPSPGQSLMGAYPNAQNQWPAGYS 439
>ref|XP_022728462.1| pre-mRNA-processing factor 39-like isoform X2 [Durio zibethinus]
Length = 641
Score = 56.2 bits (134), Expect = 2e-06
Identities = 23/42 (54%), Positives = 35/42 (83%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGYA 127
AEDFLA++KTK++++ + A S S++GAYPNA+NQW +GY+
Sbjct: 505 AEDFLASEKTKLAKSYSGAPSPGQSLMGAYPNAQNQWPAGYS 546
>ref|XP_022758531.1| pre-mRNA-processing factor 39-like isoform X7 [Durio zibethinus]
Length = 653
Score = 56.2 bits (134), Expect = 2e-06
Identities = 23/41 (56%), Positives = 34/41 (82%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGY 124
AEDFL++DKTK++++ + A S S++GAYPNA+NQW +GY
Sbjct: 505 AEDFLSSDKTKLAKSYSGAPSPGQSLMGAYPNAQNQWPAGY 545
>ref|XP_022758530.1| pre-mRNA-processing factor 39-like isoform X6 [Durio zibethinus]
Length = 754
Score = 56.2 bits (134), Expect = 2e-06
Identities = 23/41 (56%), Positives = 34/41 (82%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGY 124
AEDFL++DKTK++++ + A S S++GAYPNA+NQW +GY
Sbjct: 606 AEDFLSSDKTKLAKSYSGAPSPGQSLMGAYPNAQNQWPAGY 646
>ref|XP_022758529.1| pre-mRNA-processing factor 39-like isoform X5 [Durio zibethinus]
Length = 774
Score = 56.2 bits (134), Expect = 2e-06
Identities = 23/41 (56%), Positives = 34/41 (82%)
Frame = +2
Query: 2 AEDFLAADKTKVSRTSTDAASSSHSVVGAYPNAENQWTSGY 124
AEDFL++DKTK++++ + A S S++GAYPNA+NQW +GY
Sbjct: 626 AEDFLSSDKTKLAKSYSGAPSPGQSLMGAYPNAQNQWPAGY 666