BLASTX nr result
ID: Ophiopogon23_contig00004935
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00004935
(531 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK55218.1| uncharacterized protein A4U43_UnF6300 [Asparagus ... 193 8e-60
ref|XP_020250262.1| 30S ribosomal protein S1, chloroplastic-like... 193 3e-59
ref|XP_020700668.1| 30S ribosomal protein S1, chloroplastic [Den... 197 2e-58
gb|ABR25587.1| 30S ribosomal protein S1, partial [Oryza sativa I... 191 2e-58
ref|XP_020583131.1| 30S ribosomal protein S1, chloroplastic-like... 192 1e-57
gb|AFY06648.1| ribosomal protein S, partial [Carica papaya] 192 2e-57
gb|KMZ56493.1| 30S ribosomal protein S1, chloroplastic [Zostera ... 194 3e-57
gb|KZM85609.1| hypothetical protein DCAR_026969 [Daucus carota s... 191 4e-57
gb|PNT23815.1| hypothetical protein POPTR_008G101100v3 [Populus ... 192 5e-57
gb|PIA60909.1| hypothetical protein AQUCO_00300434v1 [Aquilegia ... 191 5e-57
pdb|5X8R|8 Chain 8, Structure Of The 30s Small Subunit Of Chloro... 192 6e-57
gb|POF12412.1| 30s ribosomal protein s1, chloroplastic [Quercus ... 192 7e-57
ref|XP_015867277.1| PREDICTED: 30S ribosomal protein S1, chlorop... 190 8e-57
gb|ESR32541.1| hypothetical protein CICLE_v10005364mg [Citrus cl... 191 8e-57
ref|XP_006649986.1| PREDICTED: 30S ribosomal protein S1, chlorop... 191 1e-56
ref|XP_022547363.1| 30S ribosomal protein S1, chloroplastic-like... 191 1e-56
ref|XP_006841606.1| 30S ribosomal protein S1, chloroplastic [Amb... 192 2e-56
gb|OVA16711.1| Ribosomal protein S1 [Macleaya cordata] 192 2e-56
ref|XP_022870381.1| 30S ribosomal protein S1, chloroplastic [Ole... 192 2e-56
ref|XP_021686205.1| 30S ribosomal protein S1, chloroplastic isof... 192 2e-56
>gb|ONK55218.1| uncharacterized protein A4U43_UnF6300 [Asparagus officinalis]
Length = 188
Score = 193 bits (491), Expect = 8e-60
Identities = 98/98 (100%), Positives = 98/98 (100%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 47 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 106
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 238
RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE
Sbjct: 107 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 144
>ref|XP_020250262.1| 30S ribosomal protein S1, chloroplastic-like, partial [Asparagus
officinalis]
Length = 228
Score = 193 bits (491), Expect = 3e-59
Identities = 98/98 (100%), Positives = 98/98 (100%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 87 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 146
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 238
RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE
Sbjct: 147 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 184
>ref|XP_020700668.1| 30S ribosomal protein S1, chloroplastic [Dendrobium catenatum]
Length = 436
Score = 197 bits (502), Expect = 2e-58
Identities = 109/142 (76%), Positives = 117/142 (82%), Gaps = 2/142 (1%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDI+TVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 293 IGGINGLLHVSQISHDRVSDISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPELVRPWVCLISTVCSSIQGKTGS 172
RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE S + S G GS
Sbjct: 353 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE---------SGLSLSSDGILGS 403
Query: 171 ISS--PTDLLYRDNLVFLDQVI 112
+SS P D L+ D++ + V+
Sbjct: 404 LSSDLPADGLHLDDVPPAEDVV 425
>gb|ABR25587.1| 30S ribosomal protein S1, partial [Oryza sativa Indica Group]
Length = 217
Score = 191 bits (484), Expect = 2e-58
Identities = 102/125 (81%), Positives = 107/125 (85%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRV+DI+TVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 89 IGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 148
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPELVRPWVCLISTVCSSIQGKTGS 172
RNPKLVFEKADEMAQ FRQRIAQAEAMARADMLRFQPE S + S +G G
Sbjct: 149 RNPKLVFEKADEMAQIFRQRIAQAEAMARADMLRFQPE---------SGLTLSSEGILGP 199
Query: 171 ISSPT 157
+SS T
Sbjct: 200 LSSDT 204
>ref|XP_020583131.1| 30S ribosomal protein S1, chloroplastic-like [Phalaenopsis
equestris]
Length = 319
Score = 192 bits (488), Expect = 1e-57
Identities = 97/98 (98%), Positives = 98/98 (100%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDI+TVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 176 IGGINGLLHVSQISHDRVSDISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 235
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 238
RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE
Sbjct: 236 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 273
>gb|AFY06648.1| ribosomal protein S, partial [Carica papaya]
Length = 324
Score = 192 bits (487), Expect = 2e-57
Identities = 97/98 (98%), Positives = 98/98 (100%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 193 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 252
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 238
RNPKLVFEKA+EMAQTFRQRIAQAEAMARADMLRFQPE
Sbjct: 253 RNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPE 290
>gb|KMZ56493.1| 30S ribosomal protein S1, chloroplastic [Zostera marina]
Length = 413
Score = 194 bits (492), Expect = 3e-57
Identities = 106/128 (82%), Positives = 109/128 (85%), Gaps = 2/128 (1%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDI+TVLQPGD LKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 282 IGGINGLLHVSQISHDRVSDISTVLQPGDVLKVMILSHDRERGRVSLSTKKLEPTPGDMI 341
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPELVRPWVCLISTVCSSIQGKTGS 172
RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE S + S G GS
Sbjct: 342 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE---------SGLSLSSDGILGS 392
Query: 171 ISS--PTD 154
+SS PTD
Sbjct: 393 LSSEIPTD 400
>gb|KZM85609.1| hypothetical protein DCAR_026969 [Daucus carota subsp. sativus]
Length = 327
Score = 191 bits (485), Expect = 4e-57
Identities = 102/123 (82%), Positives = 106/123 (86%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDIATV QPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 197 IGGINGLLHVSQISHDRVSDIATVFQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 256
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPELVRPWVCLISTVCSSIQGKTGS 172
RNPKLVFEKA+EMAQTFRQRIAQAEAMARADMLRFQPE ST+ + G G
Sbjct: 257 RNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPE---------STLTLTPDGILGP 307
Query: 171 ISS 163
+SS
Sbjct: 308 LSS 310
>gb|PNT23815.1| hypothetical protein POPTR_008G101100v3 [Populus trichocarpa]
Length = 359
Score = 192 bits (487), Expect = 5e-57
Identities = 97/98 (98%), Positives = 98/98 (100%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 219 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 278
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 238
RNPKLVFEKA+EMAQTFRQRIAQAEAMARADMLRFQPE
Sbjct: 279 RNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPE 316
>gb|PIA60909.1| hypothetical protein AQUCO_00300434v1 [Aquilegia coerulea]
Length = 322
Score = 191 bits (484), Expect = 5e-57
Identities = 96/98 (97%), Positives = 98/98 (100%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRV+DIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 192 IGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 251
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 238
RNPKLVFEKA+EMAQTFRQRIAQAEAMARADMLRFQPE
Sbjct: 252 RNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPE 289
>pdb|5X8R|8 Chain 8, Structure Of The 30s Small Subunit Of Chloroplast Ribosome
From Spinach
Length = 370
Score = 192 bits (487), Expect = 6e-57
Identities = 97/98 (98%), Positives = 98/98 (100%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 239 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 298
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 238
RNPKLVFEKA+EMAQTFRQRIAQAEAMARADMLRFQPE
Sbjct: 299 RNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPE 336
>gb|POF12412.1| 30s ribosomal protein s1, chloroplastic [Quercus suber]
Length = 375
Score = 192 bits (487), Expect = 7e-57
Identities = 97/98 (98%), Positives = 98/98 (100%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 239 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 298
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 238
RNPKLVFEKA+EMAQTFRQRIAQAEAMARADMLRFQPE
Sbjct: 299 RNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPE 336
>ref|XP_015867277.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Ziziphus
jujuba]
Length = 325
Score = 190 bits (483), Expect = 8e-57
Identities = 96/98 (97%), Positives = 97/98 (98%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDI TVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 193 IGGINGLLHVSQISHDRVSDIGTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 252
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 238
RNPKLVFEKA+EMAQTFRQRIAQAEAMARADMLRFQPE
Sbjct: 253 RNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPE 290
>gb|ESR32541.1| hypothetical protein CICLE_v10005364mg [Citrus clementina]
Length = 339
Score = 191 bits (484), Expect = 8e-57
Identities = 96/98 (97%), Positives = 98/98 (100%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRV+DIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 209 IGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 268
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 238
RNPKLVFEKA+EMAQTFRQRIAQAEAMARADMLRFQPE
Sbjct: 269 RNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPE 306
>ref|XP_006649986.1| PREDICTED: 30S ribosomal protein S1, chloroplastic [Oryza
brachyantha]
Length = 353
Score = 191 bits (484), Expect = 1e-56
Identities = 102/125 (81%), Positives = 107/125 (85%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRV+DI+TVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 225 IGGINGLLHVSQISHDRVADISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 284
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPELVRPWVCLISTVCSSIQGKTGS 172
RNPKLVFEKADEMAQ FRQRIAQAEAMARADMLRFQPE S + S +G G
Sbjct: 285 RNPKLVFEKADEMAQIFRQRIAQAEAMARADMLRFQPE---------SGLTLSSEGILGP 335
Query: 171 ISSPT 157
+SS T
Sbjct: 336 LSSDT 340
>ref|XP_022547363.1| 30S ribosomal protein S1, chloroplastic-like [Brassica napus]
Length = 357
Score = 191 bits (484), Expect = 1e-56
Identities = 96/98 (97%), Positives = 98/98 (100%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDR+RGRVSLSTKKLEPTPGDMI
Sbjct: 224 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMI 283
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 238
RNPKLVFEKA+EMAQTFRQRIAQAEAMARADMLRFQPE
Sbjct: 284 RNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPE 321
>ref|XP_006841606.1| 30S ribosomal protein S1, chloroplastic [Amborella trichopoda]
gb|ERN03281.1| hypothetical protein AMTR_s00003p00212290 [Amborella trichopoda]
Length = 423
Score = 192 bits (488), Expect = 2e-56
Identities = 97/98 (98%), Positives = 98/98 (100%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 291 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 350
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 238
RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQP+
Sbjct: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPQ 388
>gb|OVA16711.1| Ribosomal protein S1 [Macleaya cordata]
Length = 409
Score = 192 bits (487), Expect = 2e-56
Identities = 97/98 (98%), Positives = 98/98 (100%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 278 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 337
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 238
RNPKLVFEKA+EMAQTFRQRIAQAEAMARADMLRFQPE
Sbjct: 338 RNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPE 375
>ref|XP_022870381.1| 30S ribosomal protein S1, chloroplastic [Olea europaea var.
sylvestris]
Length = 410
Score = 192 bits (487), Expect = 2e-56
Identities = 97/98 (98%), Positives = 98/98 (100%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 280 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 339
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 238
RNPKLVFEKA+EMAQTFRQRIAQAEAMARADMLRFQPE
Sbjct: 340 RNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPE 377
>ref|XP_021686205.1| 30S ribosomal protein S1, chloroplastic isoform X1 [Hevea
brasiliensis]
ref|XP_021686206.1| 30S ribosomal protein S1, chloroplastic isoform X2 [Hevea
brasiliensis]
Length = 410
Score = 192 bits (487), Expect = 2e-56
Identities = 97/98 (98%), Positives = 98/98 (100%)
Frame = -1
Query: 531 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 352
IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI
Sbjct: 280 IGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMI 339
Query: 351 RNPKLVFEKADEMAQTFRQRIAQAEAMARADMLRFQPE 238
RNPKLVFEKA+EMAQTFRQRIAQAEAMARADMLRFQPE
Sbjct: 340 RNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPE 377