BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00004700
         (1061 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK65887.1| uncharacterized protein A4U43_C06F2000 [Asparagus...   595   0.0  
ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asp...   595   0.0  
ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   543   e-177
gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial ...   542   e-176
ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V sub...   541   e-176
ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ana...   531   e-171
dbj|BAF07835.1| Os02g0152800, partial [Oryza sativa Japonica Gro...   486   e-168
ref|XP_018679039.1| PREDICTED: DNA-directed RNA polymerase V sub...   509   e-166
ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V sub...   509   e-164
gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indi...   486   e-154
ref|XP_015625443.1| PREDICTED: DNA-directed RNA polymerase V sub...   486   e-154
gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japo...   486   e-154
gb|EEF49563.1| DNA-directed RNA polymerase, putative [Ricinus co...   466   e-153
gb|AQK60563.1| DNA-directed RNA polymerase V subunit 1, partial ...   457   e-153
ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V sub...   484   e-153
ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V sub...   481   e-152
gb|AQK60566.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]     457   e-150
gb|OVA16557.1| RNA polymerase [Macleaya cordata]                      472   e-150
gb|AQK60583.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]     457   e-150
gb|AQK60564.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]     457   e-150

>gb|ONK65887.1| uncharacterized protein A4U43_C06F2000 [Asparagus officinalis]
          Length = 1833

 Score =  595 bits (1534), Expect = 0.0
 Identities = 286/332 (86%), Positives = 316/332 (95%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEA 180
            HCRD+P ISIKEVKTSDGA+CLQL+V S+ R+R+GFWNFL+++GFR+GDGTCRTLLPLEA
Sbjct: 127  HCRDIPPISIKEVKTSDGAVCLQLTVSSKLRLREGFWNFLSKYGFRHGDGTCRTLLPLEA 186

Query: 181  LNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLK 360
            LNILKEIPEETKKRL AKG+F Q+GY+LQYLPVPPNCLLVPEISDGKSVMSSD+SIS+LK
Sbjct: 187  LNILKEIPEETKKRLVAKGYFPQDGYILQYLPVPPNCLLVPEISDGKSVMSSDISISLLK 246

Query: 361  RVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAG 540
            RVL+KIELIKRSRSGSPNFESHEVECNDLQL IAEYMHLRG+ +APHD+++K +LG DAG
Sbjct: 247  RVLSKIELIKRSRSGSPNFESHEVECNDLQLVIAEYMHLRGSAKAPHDVSKKLVLGPDAG 306

Query: 541  KNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNL 720
            KNSSKQWLEKIRTLFISKGSGFSSRSVITGDSY GIN+IGLPSEIAK+VTFEERVT HNL
Sbjct: 307  KNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYIGINEIGLPSEIAKKVTFEERVTAHNL 366

Query: 721  ERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHK 900
            ERLQKMV++ LCVTY+DG STYAIAVGS+ HT LKVGQ+I+R IVDGDIVFINRPPSTHK
Sbjct: 367  ERLQKMVNDGLCVTYRDGKSTYAIAVGSKAHTILKVGQVISRSIVDGDIVFINRPPSTHK 426

Query: 901  HSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            HSLQAFTVYVHDDHTVKINPLVCAPLGADFDG
Sbjct: 427  HSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 458


>ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
 ref|XP_020269147.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
          Length = 1945

 Score =  595 bits (1534), Expect = 0.0
 Identities = 286/332 (86%), Positives = 316/332 (95%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEA 180
            HCRD+P ISIKEVKTSDGA+CLQL+V S+ R+R+GFWNFL+++GFR+GDGTCRTLLPLEA
Sbjct: 127  HCRDIPPISIKEVKTSDGAVCLQLTVSSKLRLREGFWNFLSKYGFRHGDGTCRTLLPLEA 186

Query: 181  LNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLK 360
            LNILKEIPEETKKRL AKG+F Q+GY+LQYLPVPPNCLLVPEISDGKSVMSSD+SIS+LK
Sbjct: 187  LNILKEIPEETKKRLVAKGYFPQDGYILQYLPVPPNCLLVPEISDGKSVMSSDISISLLK 246

Query: 361  RVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAG 540
            RVL+KIELIKRSRSGSPNFESHEVECNDLQL IAEYMHLRG+ +APHD+++K +LG DAG
Sbjct: 247  RVLSKIELIKRSRSGSPNFESHEVECNDLQLVIAEYMHLRGSAKAPHDVSKKLVLGPDAG 306

Query: 541  KNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNL 720
            KNSSKQWLEKIRTLFISKGSGFSSRSVITGDSY GIN+IGLPSEIAK+VTFEERVT HNL
Sbjct: 307  KNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYIGINEIGLPSEIAKKVTFEERVTAHNL 366

Query: 721  ERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHK 900
            ERLQKMV++ LCVTY+DG STYAIAVGS+ HT LKVGQ+I+R IVDGDIVFINRPPSTHK
Sbjct: 367  ERLQKMVNDGLCVTYRDGKSTYAIAVGSKAHTILKVGQVISRSIVDGDIVFINRPPSTHK 426

Query: 901  HSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            HSLQAFTVYVHDDHTVKINPLVCAPLGADFDG
Sbjct: 427  HSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 458


>ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
            1-like [Phoenix dactylifera]
          Length = 1656

 Score =  543 bits (1399), Expect = e-177
 Identities = 262/332 (78%), Positives = 299/332 (90%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEA 180
            +CRDLP IS+KEVKT+D A+CL+L V SRTR+RDGFWNFL RFGF YGD  CR LLP EA
Sbjct: 83   YCRDLPPISVKEVKTTDNALCLELRVSSRTRLRDGFWNFLNRFGFCYGDTYCRPLLPYEA 142

Query: 181  LNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLK 360
            LNILKEIPEETKKRL+AKG+F Q G++LQYLPVPPNCL VPEISDGK++MSSD+SIS+LK
Sbjct: 143  LNILKEIPEETKKRLAAKGYFPQIGFILQYLPVPPNCLCVPEISDGKNIMSSDISISLLK 202

Query: 361  RVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAG 540
            RVLNKIELIKRSRSG PNF+SHEVE NDLQL+I++YM LRGT + P DIT+KF +G +A 
Sbjct: 203  RVLNKIELIKRSRSGFPNFKSHEVESNDLQLSISQYMRLRGTPKVPQDITKKFAIGTEAN 262

Query: 541  KNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNL 720
            + S+K WLEK+RTLFI KGSGFSSRSVITGD+Y G+N IGLPSEIAKR+TFEERVTVHN+
Sbjct: 263  ECSTKLWLEKMRTLFIRKGSGFSSRSVITGDAYIGVNVIGLPSEIAKRITFEERVTVHNM 322

Query: 721  ERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHK 900
            ++LQ++VD  LCVTYKDG STYAIAVGS+GHT LKVGQ+INR I+DGDIVFINRPPSTHK
Sbjct: 323  KQLQEVVDKGLCVTYKDGFSTYAIAVGSKGHTYLKVGQVINRRIMDGDIVFINRPPSTHK 382

Query: 901  HSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            HSLQAF VYVHDDHTVKINPL+CAPLGADFDG
Sbjct: 383  HSLQAFYVYVHDDHTVKINPLICAPLGADFDG 414


>gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial [Cocos nucifera]
          Length = 1673

 Score =  542 bits (1397), Expect = e-176
 Identities = 261/332 (78%), Positives = 298/332 (89%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEA 180
            +CRDLP IS+KEVKT+D A+CL+L V SRTR+RDGFW FL RFGF YGD  CR LLP EA
Sbjct: 125  YCRDLPPISVKEVKTTDNALCLELRVSSRTRLRDGFWKFLDRFGFCYGDTYCRPLLPYEA 184

Query: 181  LNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLK 360
            LNILKEIPEETKKRL+AKG+F Q G++LQYLPVPPNCL VPE+SDGKS+MSSD+SIS+LK
Sbjct: 185  LNILKEIPEETKKRLAAKGYFPQIGFILQYLPVPPNCLCVPEVSDGKSIMSSDISISLLK 244

Query: 361  RVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAG 540
            RVLNKIELIKRSRSG PNF+SHEVE NDLQ +I++YMHLRGT + P DIT+KF +G +A 
Sbjct: 245  RVLNKIELIKRSRSGFPNFKSHEVESNDLQSSISQYMHLRGTPKVPQDITKKFAIGTEAN 304

Query: 541  KNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNL 720
            + S+K WLEK+RTLFI KGSGFSSRSVITGD+Y G+N IGLPSEIAKR+TFEERVTVHN+
Sbjct: 305  ECSTKLWLEKMRTLFIRKGSGFSSRSVITGDAYIGVNVIGLPSEIAKRITFEERVTVHNM 364

Query: 721  ERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHK 900
            ++LQ++VD  LCVTYKDG STYAIAVGS+GHT LKVGQ+INR I+DGDIVFINRPPSTHK
Sbjct: 365  KQLQEVVDKGLCVTYKDGFSTYAIAVGSKGHTYLKVGQVINRRIMDGDIVFINRPPSTHK 424

Query: 901  HSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            HSLQAF VYVHDDHTVKINPL+CAPLGADFDG
Sbjct: 425  HSLQAFYVYVHDDHTVKINPLICAPLGADFDG 456


>ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
 ref|XP_010932323.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
 ref|XP_019708936.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
 ref|XP_019708937.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
          Length = 1708

 Score =  541 bits (1394), Expect = e-176
 Identities = 260/332 (78%), Positives = 298/332 (89%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEA 180
            +CRDLP IS+KEVKT+D A+CL+L V SRTR+RDGFW FL RFGF YGD  CR LLP EA
Sbjct: 125  YCRDLPPISVKEVKTTDNALCLELRVSSRTRLRDGFWKFLDRFGFCYGDTYCRPLLPYEA 184

Query: 181  LNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLK 360
            LNILKEIP+ETKKRL+AKG+F Q G++LQYLPVPPNCL VPE+SDGKS+MSSD+SIS+LK
Sbjct: 185  LNILKEIPQETKKRLAAKGYFPQIGFILQYLPVPPNCLCVPEVSDGKSIMSSDISISLLK 244

Query: 361  RVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAG 540
            RVLNKIELIKRSRSG PNF+SHEVE NDLQ +I++YMHLRGT + P DIT+KF +G +A 
Sbjct: 245  RVLNKIELIKRSRSGFPNFKSHEVESNDLQSSISQYMHLRGTPKVPQDITKKFAIGTEAN 304

Query: 541  KNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNL 720
            + S+K WLEK+RTLFI KGSGFSSRSVITGD+Y G+N IGLPSEIAKR+TFEERVTVHN+
Sbjct: 305  ECSTKLWLEKMRTLFIRKGSGFSSRSVITGDAYIGVNVIGLPSEIAKRITFEERVTVHNM 364

Query: 721  ERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHK 900
            ++LQ++VD  LCVTYKDG STYAIAVGS+GHT LKVGQ+INR I+DGDIVFINRPPSTHK
Sbjct: 365  KQLQEVVDKGLCVTYKDGFSTYAIAVGSKGHTYLKVGQVINRRIMDGDIVFINRPPSTHK 424

Query: 901  HSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            HSLQAF VYVHDDHTVKINPL+CAPLGADFDG
Sbjct: 425  HSLQAFYVYVHDDHTVKINPLICAPLGADFDG 456


>ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ananas comosus]
          Length = 1800

 Score =  531 bits (1368), Expect = e-171
 Identities = 253/331 (76%), Positives = 298/331 (90%)
 Frame = +1

Query: 4    CRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEAL 183
            CRDL +IS+KEVKT+DGA+ L+L VPSR R+RDGFWNFL RFGF YGD  CR LLP EAL
Sbjct: 130  CRDL-SISVKEVKTTDGALSLELRVPSRKRLRDGFWNFLDRFGFHYGDSFCRPLLPCEAL 188

Query: 184  NILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKR 363
            NILKEIPEET+++L+ KG+F Q GY++Q+LPVPPNCL VPE SDGKS+MS D+SI++LKR
Sbjct: 189  NILKEIPEETRRKLATKGYFPQTGYIMQHLPVPPNCLYVPEFSDGKSIMSFDISIALLKR 248

Query: 364  VLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGK 543
            VLNKIE+IKRSRSGSPNFESHEVE  DLQ ++A+YMHLRGTT+ P D +++FM+G +A +
Sbjct: 249  VLNKIEMIKRSRSGSPNFESHEVESTDLQSSVAQYMHLRGTTKGPQD-SKRFMIGMEANE 307

Query: 544  NSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLE 723
             S+KQWLEK+RTLFI KGSGFSSRSVITGD+Y GIN IGLPSEIAK++TFEERVT HN++
Sbjct: 308  CSTKQWLEKMRTLFIRKGSGFSSRSVITGDAYIGINVIGLPSEIAKKITFEERVTEHNMK 367

Query: 724  RLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKH 903
            RLQ++VDNRLCVTY+DG STYAI+VGS+GHT LK+GQ++NR IVDGDIVFINRPPSTHKH
Sbjct: 368  RLQEVVDNRLCVTYRDGASTYAISVGSKGHTCLKIGQIVNRRIVDGDIVFINRPPSTHKH 427

Query: 904  SLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            SLQAF VYVHDDHTVKINPL+CAPLGADFDG
Sbjct: 428  SLQAFYVYVHDDHTVKINPLICAPLGADFDG 458


>dbj|BAF07835.1| Os02g0152800, partial [Oryza sativa Japonica Group]
 dbj|BAS77022.1| Os02g0152800, partial [Oryza sativa Japonica Group]
          Length = 488

 Score =  486 bits (1252), Expect = e-168
 Identities = 230/333 (69%), Positives = 285/333 (85%), Gaps = 1/333 (0%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGT-CRTLLPLE 177
            +CRDLPA+S+KE+KT+DGA  L+L +P R  M +G WNFL ++GF +G  + CRTLLP E
Sbjct: 126  YCRDLPALSLKEIKTADGAFRLELKMPPRKFMTEGSWNFLDKYGFHHGGTSHCRTLLPEE 185

Query: 178  ALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISML 357
            ALNILK+IPEETK++L+A+G+ AQ+GYV++YLPVPPNCL +PE +DG+S+MS D+SIS+L
Sbjct: 186  ALNILKKIPEETKRKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISISLL 245

Query: 358  KRVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDA 537
            K+VL KIE IK+SR+GSPNFESHEVE  DLQL+IA+Y+HLRGTTR P D T++F +  D 
Sbjct: 246  KKVLQKIEQIKKSRAGSPNFESHEVESCDLQLSIAQYIHLRGTTRGPQDNTKRFAISTDP 305

Query: 538  GKNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHN 717
               S+KQWLEK+RTLFISKGSGFSSRSV+TGD Y G++ IGLPSE+AKR+TFEE+VT  N
Sbjct: 306  SALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRITFEEQVTDIN 365

Query: 718  LERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTH 897
            L RLQ++VD  LC+TY+DG +TYAI VGS+GHT LKVGQ I+R IVDGD+VF+NRPPSTH
Sbjct: 366  LNRLQEIVDKGLCLTYRDGQATYAITVGSKGHTTLKVGQTISRRIVDGDVVFLNRPPSTH 425

Query: 898  KHSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            KHSLQAF VYVH+DHTVKINPL+CAP  ADFDG
Sbjct: 426  KHSLQAFRVYVHEDHTVKINPLICAPFAADFDG 458


>ref|XP_018679039.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 1444

 Score =  509 bits (1311), Expect = e-166
 Identities = 242/332 (72%), Positives = 291/332 (87%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEA 180
            +C DLP+ISIKEVKT+DGA CL+L V SR+R++DGFW+FL RFG+ Y     R LLP EA
Sbjct: 124  YCLDLPSISIKEVKTADGATCLELRVSSRSRLQDGFWSFLDRFGYHYAGTFRRPLLPSEA 183

Query: 181  LNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLK 360
            L IL+++PEET+K+L+ KG+F QNG++++ LPVPPNCL VPEISDGK VMSSD+S S+LK
Sbjct: 184  LKILEKLPEETQKKLAGKGYFLQNGFIMERLPVPPNCLCVPEISDGKCVMSSDISKSLLK 243

Query: 361  RVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAG 540
            ++L KIELIKRSRSGSP+FES+EVE NDLQ +IA YM+LRGTT+AP DITR+F  G +  
Sbjct: 244  KILGKIELIKRSRSGSPSFESYEVETNDLQSSIALYMNLRGTTKAPRDITRRFAFGNETN 303

Query: 541  KNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNL 720
            +  +KQWL+KIRTLFI KGSGFSSRSVI+GD Y GIN +GLPSEIAKR+TFEERVT HN+
Sbjct: 304  EYLTKQWLDKIRTLFIRKGSGFSSRSVISGDPYIGINVVGLPSEIAKRITFEERVTEHNI 363

Query: 721  ERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHK 900
             RLQ +VD+RLC+TYKDG+STYAI+VGS+GHTNLK+GQ+INR I+DGDIVFINRPPSTHK
Sbjct: 364  TRLQNVVDSRLCITYKDGSSTYAISVGSKGHTNLKIGQVINRQILDGDIVFINRPPSTHK 423

Query: 901  HSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            HSLQAF VY+HDDHTVKINPL+CAPLGADFDG
Sbjct: 424  HSLQAFYVYIHDDHTVKINPLICAPLGADFDG 455


>ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa
            acuminata subsp. malaccensis]
 ref|XP_009391190.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 1738

 Score =  509 bits (1311), Expect = e-164
 Identities = 242/332 (72%), Positives = 291/332 (87%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEA 180
            +C DLP+ISIKEVKT+DGA CL+L V SR+R++DGFW+FL RFG+ Y     R LLP EA
Sbjct: 124  YCLDLPSISIKEVKTADGATCLELRVSSRSRLQDGFWSFLDRFGYHYAGTFRRPLLPSEA 183

Query: 181  LNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLK 360
            L IL+++PEET+K+L+ KG+F QNG++++ LPVPPNCL VPEISDGK VMSSD+S S+LK
Sbjct: 184  LKILEKLPEETQKKLAGKGYFLQNGFIMERLPVPPNCLCVPEISDGKCVMSSDISKSLLK 243

Query: 361  RVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAG 540
            ++L KIELIKRSRSGSP+FES+EVE NDLQ +IA YM+LRGTT+AP DITR+F  G +  
Sbjct: 244  KILGKIELIKRSRSGSPSFESYEVETNDLQSSIALYMNLRGTTKAPRDITRRFAFGNETN 303

Query: 541  KNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNL 720
            +  +KQWL+KIRTLFI KGSGFSSRSVI+GD Y GIN +GLPSEIAKR+TFEERVT HN+
Sbjct: 304  EYLTKQWLDKIRTLFIRKGSGFSSRSVISGDPYIGINVVGLPSEIAKRITFEERVTEHNI 363

Query: 721  ERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHK 900
             RLQ +VD+RLC+TYKDG+STYAI+VGS+GHTNLK+GQ+INR I+DGDIVFINRPPSTHK
Sbjct: 364  TRLQNVVDSRLCITYKDGSSTYAISVGSKGHTNLKIGQVINRQILDGDIVFINRPPSTHK 423

Query: 901  HSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            HSLQAF VY+HDDHTVKINPL+CAPLGADFDG
Sbjct: 424  HSLQAFYVYIHDDHTVKINPLICAPLGADFDG 455


>gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indica Group]
          Length = 1867

 Score =  486 bits (1252), Expect = e-154
 Identities = 230/333 (69%), Positives = 285/333 (85%), Gaps = 1/333 (0%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGT-CRTLLPLE 177
            +CRDLPA+S+KE+KT+DGA  L+L +P R  M +G WNFL ++GF +G  + CRTLLP E
Sbjct: 126  YCRDLPALSLKEIKTADGAFRLELKMPPRKFMTEGSWNFLDKYGFHHGGTSHCRTLLPEE 185

Query: 178  ALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISML 357
            ALNILK+IPEETK++L+A+G+ AQ+GYV++YLPVPPNCL +PE +DG+S+MS D+SIS+L
Sbjct: 186  ALNILKKIPEETKRKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISISLL 245

Query: 358  KRVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDA 537
            K+VL KIE IK+SR+GSPNFESHEVE  DLQL+IA+Y+HLRGTTR P D T++F +  D 
Sbjct: 246  KKVLQKIEQIKKSRAGSPNFESHEVESCDLQLSIAQYIHLRGTTRGPQDNTKRFAISTDP 305

Query: 538  GKNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHN 717
               S+KQWLEK+RTLFISKGSGFSSRSV+TGD Y G++ IGLPSE+AKR+TFEE+VT  N
Sbjct: 306  SALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRITFEEQVTDIN 365

Query: 718  LERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTH 897
            L RLQ++VD  LC+TY+DG +TYAI VGS+GHT LKVGQ I+R IVDGD+VF+NRPPSTH
Sbjct: 366  LNRLQEIVDKGLCLTYRDGQATYAITVGSKGHTTLKVGQTISRRIVDGDVVFLNRPPSTH 425

Query: 898  KHSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            KHSLQAF VYVH+DHTVKINPL+CAP  ADFDG
Sbjct: 426  KHSLQAFRVYVHEDHTVKINPLICAPFAADFDG 458


>ref|XP_015625443.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Oryza sativa
            Japonica Group]
          Length = 1962

 Score =  486 bits (1252), Expect = e-154
 Identities = 230/333 (69%), Positives = 285/333 (85%), Gaps = 1/333 (0%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGT-CRTLLPLE 177
            +CRDLPA+S+KE+KT+DGA  L+L +P R  M +G WNFL ++GF +G  + CRTLLP E
Sbjct: 126  YCRDLPALSLKEIKTADGAFRLELKMPPRKFMTEGSWNFLDKYGFHHGGTSHCRTLLPEE 185

Query: 178  ALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISML 357
            ALNILK+IPEETK++L+A+G+ AQ+GYV++YLPVPPNCL +PE +DG+S+MS D+SIS+L
Sbjct: 186  ALNILKKIPEETKRKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISISLL 245

Query: 358  KRVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDA 537
            K+VL KIE IK+SR+GSPNFESHEVE  DLQL+IA+Y+HLRGTTR P D T++F +  D 
Sbjct: 246  KKVLQKIEQIKKSRAGSPNFESHEVESCDLQLSIAQYIHLRGTTRGPQDNTKRFAISTDP 305

Query: 538  GKNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHN 717
               S+KQWLEK+RTLFISKGSGFSSRSV+TGD Y G++ IGLPSE+AKR+TFEE+VT  N
Sbjct: 306  SALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRITFEEQVTDIN 365

Query: 718  LERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTH 897
            L RLQ++VD  LC+TY+DG +TYAI VGS+GHT LKVGQ I+R IVDGD+VF+NRPPSTH
Sbjct: 366  LNRLQEIVDKGLCLTYRDGQATYAITVGSKGHTTLKVGQTISRRIVDGDVVFLNRPPSTH 425

Query: 898  KHSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            KHSLQAF VYVH+DHTVKINPL+CAP  ADFDG
Sbjct: 426  KHSLQAFRVYVHEDHTVKINPLICAPFAADFDG 458


>gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japonica Group]
          Length = 2017

 Score =  486 bits (1252), Expect = e-154
 Identities = 230/333 (69%), Positives = 285/333 (85%), Gaps = 1/333 (0%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGT-CRTLLPLE 177
            +CRDLPA+S+KE+KT+DGA  L+L +P R  M +G WNFL ++GF +G  + CRTLLP E
Sbjct: 126  YCRDLPALSLKEIKTADGAFRLELKMPPRKFMTEGSWNFLDKYGFHHGGTSHCRTLLPEE 185

Query: 178  ALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISML 357
            ALNILK+IPEETK++L+A+G+ AQ+GYV++YLPVPPNCL +PE +DG+S+MS D+SIS+L
Sbjct: 186  ALNILKKIPEETKRKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISISLL 245

Query: 358  KRVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDA 537
            K+VL KIE IK+SR+GSPNFESHEVE  DLQL+IA+Y+HLRGTTR P D T++F +  D 
Sbjct: 246  KKVLQKIEQIKKSRAGSPNFESHEVESCDLQLSIAQYIHLRGTTRGPQDNTKRFAISTDP 305

Query: 538  GKNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHN 717
               S+KQWLEK+RTLFISKGSGFSSRSV+TGD Y G++ IGLPSE+AKR+TFEE+VT  N
Sbjct: 306  SALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRITFEEQVTDIN 365

Query: 718  LERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTH 897
            L RLQ++VD  LC+TY+DG +TYAI VGS+GHT LKVGQ I+R IVDGD+VF+NRPPSTH
Sbjct: 366  LNRLQEIVDKGLCLTYRDGQATYAITVGSKGHTTLKVGQTISRRIVDGDVVFLNRPPSTH 425

Query: 898  KHSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            KHSLQAF VYVH+DHTVKINPL+CAP  ADFDG
Sbjct: 426  KHSLQAFRVYVHEDHTVKINPLICAPFAADFDG 458


>gb|EEF49563.1| DNA-directed RNA polymerase, putative [Ricinus communis]
          Length = 991

 Score =  466 bits (1199), Expect = e-153
 Identities = 213/331 (64%), Positives = 279/331 (84%)
 Frame = +1

Query: 4    CRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEAL 183
            C +   ISIKEVKT+DGA  LQL +PSR R+RDGFWNFL R+GFRYGD   RTLLP E L
Sbjct: 124  CEEAAQISIKEVKTTDGAYILQLKLPSRMRLRDGFWNFLERYGFRYGDDITRTLLPCEVL 183

Query: 184  NILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLKR 363
             +L+ IP++T+K+L+ KG+F Q+GY+++Y+PVPPNCL VP+ISDG SVMSSD+SISMLK+
Sbjct: 184  EMLRRIPQDTRKKLAKKGYFPQDGYIMRYVPVPPNCLSVPDISDGVSVMSSDLSISMLKK 243

Query: 364  VLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAGK 543
            VL ++E+IK SRSG PNFESHEVE  DLQ A+ +Y+ +RGT ++  D+  +F + +++  
Sbjct: 244  VLKQVEIIKSSRSGEPNFESHEVEAVDLQSAVDQYLQVRGTAKSARDVGERFGVHKESND 303

Query: 544  NSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNLE 723
            +S+K WLEK+RTLFI KGSGFSSRSVITGD+Y  +N+IG+PSEIA+R+TFEERV  HN++
Sbjct: 304  SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKCVNEIGIPSEIAQRITFEERVNAHNMQ 363

Query: 724  RLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHKH 903
             LQ++VDN+LC+TY+DG+STY++  GS+GHT L++GQ+++R I+DGD+VFINRPP+THKH
Sbjct: 364  YLQELVDNKLCLTYRDGSSTYSLREGSKGHTFLRLGQIVHRRIMDGDMVFINRPPTTHKH 423

Query: 904  SLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            SLQA +VYVHD HTVKINPL+C PL ADFDG
Sbjct: 424  SLQALSVYVHDGHTVKINPLICGPLSADFDG 454


>gb|AQK60563.1| DNA-directed RNA polymerase V subunit 1, partial [Zea mays]
          Length = 690

 Score =  457 bits (1175), Expect = e-153
 Identities = 217/334 (64%), Positives = 275/334 (82%), Gaps = 2/334 (0%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTC-RTLLPLE 177
            +CRD+PA+S+KE+KT+DGAI L+L  P    M +  WNFL ++GF +G  +  RTLLP E
Sbjct: 126  YCRDIPALSLKEIKTTDGAIRLELRAPHNKHMTERSWNFLDKYGFHHGGCSHHRTLLPEE 185

Query: 178  ALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISML 357
            ALNILK++P++T+++L+A+G+  Q GYV++YLPVPPNCL +PE +DG+S+MS D+SI++L
Sbjct: 186  ALNILKKVPDDTRRKLAARGYIVQTGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISIALL 245

Query: 358  KRVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQ-D 534
            K+VL KIE IKRSRSGSPNFESH+ E  DLQLAI +Y+ LRGTTR P D T++F +G  D
Sbjct: 246  KKVLQKIEQIKRSRSGSPNFESHDAESCDLQLAIGQYIRLRGTTRGPQDNTKRFTVGSAD 305

Query: 535  AGKNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVH 714
            +   S+KQWLEK+RTLFISKGSGFSSRSV+TGD Y G+  +GLPSE+AKR+TFEE+VT  
Sbjct: 306  SAALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGLGVVGLPSEVAKRMTFEEQVTDI 365

Query: 715  NLERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPST 894
            N+ RLQ +VD  LC+TY+DG +TYAI VGS+G+T LKVGQ I+R IVDGD+VF+NRPPST
Sbjct: 366  NINRLQDVVDKGLCLTYRDGQATYAITVGSKGYTTLKVGQTISRRIVDGDVVFLNRPPST 425

Query: 895  HKHSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            HKHSLQAF  YVHDDHTVKINPL+C P  ADFDG
Sbjct: 426  HKHSLQAFYAYVHDDHTVKINPLMCGPFSADFDG 459


>ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
 ref|XP_010246064.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
 ref|XP_010246066.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
          Length = 1908

 Score =  484 bits (1245), Expect = e-153
 Identities = 222/332 (66%), Positives = 283/332 (85%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEA 180
            +C DLP +SIKEVKT+DGA  L+L + SR+R +DGFWNFL R+GFRYGDG+ RTLLP E+
Sbjct: 126  YCPDLPQLSIKEVKTTDGACYLELKISSRSRSQDGFWNFLERYGFRYGDGSQRTLLPSES 185

Query: 181  LNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLK 360
            L ILK IPEET+++L  KG F Q GY+LQYLPVPPNCL VP+ISDG S+MSSD+SI+ML+
Sbjct: 186  LEILKRIPEETRRKLIGKGHFPQYGYILQYLPVPPNCLSVPDISDGISIMSSDLSITMLR 245

Query: 361  RVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAG 540
            +VL +IE+I+ SRSG+PNFES E+E N+LQ  +A Y+H+RGT +A  D+  +F + +   
Sbjct: 246  KVLKQIEIIRSSRSGAPNFESQEIEANELQSTVANYLHVRGTAKASRDVDTRFSVSKGVN 305

Query: 541  KNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNL 720
               +K WLEK+RTLFISKGSGFSSRSVITGD+Y GIN+IGLPSE+A+R+TFEE+V++HN+
Sbjct: 306  DTCTKAWLEKMRTLFISKGSGFSSRSVITGDAYKGINEIGLPSEVAQRITFEEKVSIHNM 365

Query: 721  ERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHK 900
            + LQK+VDN+LC+TY DG STY++  GS+G+T+L+VGQ++ R I+DGDIVFINRPPSTHK
Sbjct: 366  DHLQKLVDNKLCLTYTDGLSTYSLRDGSKGYTSLRVGQVVRRRIMDGDIVFINRPPSTHK 425

Query: 901  HSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            HSLQAF+VYVHDDHTVK+NPL+C PLGADFDG
Sbjct: 426  HSLQAFSVYVHDDHTVKVNPLICGPLGADFDG 457


>ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Oryza
            brachyantha]
          Length = 1993

 Score =  481 bits (1238), Expect = e-152
 Identities = 225/333 (67%), Positives = 284/333 (85%), Gaps = 1/333 (0%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGT-CRTLLPLE 177
            +CRDLPA+S+KE KT+DGA+ L+L  P R  M +G WNFL ++GF +G  + CRTLLP E
Sbjct: 126  YCRDLPALSLKENKTADGAVRLELKAPPRKFMTEGSWNFLDKYGFHHGGTSHCRTLLPEE 185

Query: 178  ALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISML 357
            ALNILK+IP+ETK++L+A+G+ AQ GYV++YLPVPPNCL +PE +DG+S+MS D+SIS+L
Sbjct: 186  ALNILKKIPDETKRKLAARGYIAQPGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISISLL 245

Query: 358  KRVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDA 537
            K+VL KIE IK+SR+GSPNFESHEVE +DLQL+IA+Y+HLRGTTR P D T++F +  D+
Sbjct: 246  KKVLQKIEQIKKSRAGSPNFESHEVESSDLQLSIAQYIHLRGTTRGPQDNTKRFSISTDS 305

Query: 538  GKNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHN 717
               S+KQWLEK+RTLFISKGSGFSSRSV+TGD Y G++ +GLPSE+AKR+TFEE+VT  N
Sbjct: 306  SALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDMVGLPSEVAKRITFEEQVTNIN 365

Query: 718  LERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTH 897
            + +LQ++VD  LC+TY+DG +TYAI VGS+GHT LKVGQ I+R IVDGDIVF+NRPPSTH
Sbjct: 366  INKLQEIVDKGLCLTYRDGQATYAITVGSKGHTTLKVGQTISRRIVDGDIVFLNRPPSTH 425

Query: 898  KHSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            KHSLQAF  YVH+DHTVKINPL+C+P  ADFDG
Sbjct: 426  KHSLQAFRAYVHEDHTVKINPLICSPFAADFDG 458


>gb|AQK60566.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 953

 Score =  457 bits (1175), Expect = e-150
 Identities = 217/334 (64%), Positives = 275/334 (82%), Gaps = 2/334 (0%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTC-RTLLPLE 177
            +CRD+PA+S+KE+KT+DGAI L+L  P    M +  WNFL ++GF +G  +  RTLLP E
Sbjct: 126  YCRDIPALSLKEIKTTDGAIRLELRAPHNKHMTERSWNFLDKYGFHHGGCSHHRTLLPEE 185

Query: 178  ALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISML 357
            ALNILK++P++T+++L+A+G+  Q GYV++YLPVPPNCL +PE +DG+S+MS D+SI++L
Sbjct: 186  ALNILKKVPDDTRRKLAARGYIVQTGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISIALL 245

Query: 358  KRVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQ-D 534
            K+VL KIE IKRSRSGSPNFESH+ E  DLQLAI +Y+ LRGTTR P D T++F +G  D
Sbjct: 246  KKVLQKIEQIKRSRSGSPNFESHDAESCDLQLAIGQYIRLRGTTRGPQDNTKRFTVGSAD 305

Query: 535  AGKNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVH 714
            +   S+KQWLEK+RTLFISKGSGFSSRSV+TGD Y G+  +GLPSE+AKR+TFEE+VT  
Sbjct: 306  SAALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGLGVVGLPSEVAKRMTFEEQVTDI 365

Query: 715  NLERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPST 894
            N+ RLQ +VD  LC+TY+DG +TYAI VGS+G+T LKVGQ I+R IVDGD+VF+NRPPST
Sbjct: 366  NINRLQDVVDKGLCLTYRDGQATYAITVGSKGYTTLKVGQTISRRIVDGDVVFLNRPPST 425

Query: 895  HKHSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            HKHSLQAF  YVHDDHTVKINPL+C P  ADFDG
Sbjct: 426  HKHSLQAFYAYVHDDHTVKINPLMCGPFSADFDG 459


>gb|OVA16557.1| RNA polymerase [Macleaya cordata]
          Length = 1742

 Score =  472 bits (1215), Expect = e-150
 Identities = 219/332 (65%), Positives = 277/332 (83%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTCRTLLPLEA 180
            +C D+P ISI+E    DGA CL+L +P R+R RDG W+FL R+GF YG   CRTLLP E 
Sbjct: 37   YCLDMPPISIRESNAKDGAFCLELKLP-RSRFRDGMWDFLERYGFLYGHEECRTLLPCEV 95

Query: 181  LNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISMLK 360
            L ILK IP ETKK+LS KG+F Q+GY+LQ LPVPPNCL VP+ISDG S+MSSD+S+SMLK
Sbjct: 96   LEILKRIPAETKKKLSGKGYFPQDGYILQKLPVPPNCLSVPDISDGTSIMSSDLSVSMLK 155

Query: 361  RVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQDAG 540
            +VL + E+IK SRSG PNFESHEVE  +LQ AIA+Y+H+RGTT+APHD+  +F +  +  
Sbjct: 156  KVLKQAEIIKTSRSGPPNFESHEVEATELQSAIAQYLHVRGTTKAPHDMNSRFGISTEND 215

Query: 541  KNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVHNL 720
             +S+K WLEK++TLFISKGSGFSSRSVITGD+Y  +++IG+P EIA+R+TFEE+VTVHN 
Sbjct: 216  SSSTKAWLEKMKTLFISKGSGFSSRSVITGDAYKRVDEIGVPLEIAQRITFEEKVTVHNK 275

Query: 721  ERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPSTHK 900
            + LQ++VD +LC+TY+DG STY++  GS  HT+L+VGQ+++R I+DGDIVFINRPPSTHK
Sbjct: 276  KHLQELVDKKLCLTYRDGVSTYSLREGSMSHTSLRVGQVVHRRIMDGDIVFINRPPSTHK 335

Query: 901  HSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            HSLQAF+VY+HD+HTVKINPL+C PLGADFDG
Sbjct: 336  HSLQAFSVYIHDEHTVKINPLICGPLGADFDG 367


>gb|AQK60583.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 994

 Score =  457 bits (1175), Expect = e-150
 Identities = 217/334 (64%), Positives = 275/334 (82%), Gaps = 2/334 (0%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTC-RTLLPLE 177
            +CRD+PA+S+KE+KT+DGAI L+L  P    M +  WNFL ++GF +G  +  RTLLP E
Sbjct: 126  YCRDIPALSLKEIKTTDGAIRLELRAPHNKHMTERSWNFLDKYGFHHGGCSHHRTLLPEE 185

Query: 178  ALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISML 357
            ALNILK++P++T+++L+A+G+  Q GYV++YLPVPPNCL +PE +DG+S+MS D+SI++L
Sbjct: 186  ALNILKKVPDDTRRKLAARGYIVQTGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISIALL 245

Query: 358  KRVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQ-D 534
            K+VL KIE IKRSRSGSPNFESH+ E  DLQLAI +Y+ LRGTTR P D T++F +G  D
Sbjct: 246  KKVLQKIEQIKRSRSGSPNFESHDAESCDLQLAIGQYIRLRGTTRGPQDNTKRFTVGSAD 305

Query: 535  AGKNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVH 714
            +   S+KQWLEK+RTLFISKGSGFSSRSV+TGD Y G+  +GLPSE+AKR+TFEE+VT  
Sbjct: 306  SAALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGLGVVGLPSEVAKRMTFEEQVTDI 365

Query: 715  NLERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPST 894
            N+ RLQ +VD  LC+TY+DG +TYAI VGS+G+T LKVGQ I+R IVDGD+VF+NRPPST
Sbjct: 366  NINRLQDVVDKGLCLTYRDGQATYAITVGSKGYTTLKVGQTISRRIVDGDVVFLNRPPST 425

Query: 895  HKHSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            HKHSLQAF  YVHDDHTVKINPL+C P  ADFDG
Sbjct: 426  HKHSLQAFYAYVHDDHTVKINPLMCGPFSADFDG 459


>gb|AQK60564.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 997

 Score =  457 bits (1175), Expect = e-150
 Identities = 217/334 (64%), Positives = 275/334 (82%), Gaps = 2/334 (0%)
 Frame = +1

Query: 1    HCRDLPAISIKEVKTSDGAICLQLSVPSRTRMRDGFWNFLARFGFRYGDGTC-RTLLPLE 177
            +CRD+PA+S+KE+KT+DGAI L+L  P    M +  WNFL ++GF +G  +  RTLLP E
Sbjct: 126  YCRDIPALSLKEIKTTDGAIRLELRAPHNKHMTERSWNFLDKYGFHHGGCSHHRTLLPEE 185

Query: 178  ALNILKEIPEETKKRLSAKGFFAQNGYVLQYLPVPPNCLLVPEISDGKSVMSSDVSISML 357
            ALNILK++P++T+++L+A+G+  Q GYV++YLPVPPNCL +PE +DG+S+MS D+SI++L
Sbjct: 186  ALNILKKVPDDTRRKLAARGYIVQTGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISIALL 245

Query: 358  KRVLNKIELIKRSRSGSPNFESHEVECNDLQLAIAEYMHLRGTTRAPHDITRKFMLGQ-D 534
            K+VL KIE IKRSRSGSPNFESH+ E  DLQLAI +Y+ LRGTTR P D T++F +G  D
Sbjct: 246  KKVLQKIEQIKRSRSGSPNFESHDAESCDLQLAIGQYIRLRGTTRGPQDNTKRFTVGSAD 305

Query: 535  AGKNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYTGINQIGLPSEIAKRVTFEERVTVH 714
            +   S+KQWLEK+RTLFISKGSGFSSRSV+TGD Y G+  +GLPSE+AKR+TFEE+VT  
Sbjct: 306  SAALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGLGVVGLPSEVAKRMTFEEQVTDI 365

Query: 715  NLERLQKMVDNRLCVTYKDGNSTYAIAVGSQGHTNLKVGQLINRGIVDGDIVFINRPPST 894
            N+ RLQ +VD  LC+TY+DG +TYAI VGS+G+T LKVGQ I+R IVDGD+VF+NRPPST
Sbjct: 366  NINRLQDVVDKGLCLTYRDGQATYAITVGSKGYTTLKVGQTISRRIVDGDVVFLNRPPST 425

Query: 895  HKHSLQAFTVYVHDDHTVKINPLVCAPLGADFDG 996
            HKHSLQAF  YVHDDHTVKINPL+C P  ADFDG
Sbjct: 426  HKHSLQAFYAYVHDDHTVKINPLMCGPFSADFDG 459