BLASTX nr result
ID: Ophiopogon23_contig00004568
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00004568
(494 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylat... 86 2e-16
ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylat... 86 2e-16
ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylat... 86 2e-16
ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylat... 86 2e-16
ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylat... 77 3e-13
ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylat... 77 3e-13
ref|XP_020258675.1| protein RNA-directed DNA methylation 3, part... 62 6e-08
gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas co... 61 1e-07
ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isofo... 61 1e-07
ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isofo... 61 1e-07
ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isofo... 61 1e-07
ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isofo... 61 1e-07
gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagu... 60 3e-07
>ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X4
[Elaeis guineensis]
Length = 2066
Score = 85.9 bits (211), Expect = 2e-16
Identities = 58/145 (40%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Frame = -1
Query: 428 MAVKEKGKQIAGKA-QASSASTSSGKRKKVVS--RGPGDQRRKRRAGVLQFFXXXXXXXX 258
MA+K KGKQ+AGKA A++AS+SSGKRKK + G +R+K+R GVLQFF
Sbjct: 1 MALKGKGKQVAGKALDATAASSSSGKRKKPAAEEEASGGRRKKKRPGVLQFF------DD 54
Query: 257 XXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXX 78
DF +S ++ R GK +PF +K
Sbjct: 55 AAVDADSDDEDEDLDLGEEDADLDFMDASKSGNEDIRPVGKSHPVPFFLKEEELSGDELE 114
Query: 77 XLIKDRYGRGSEYVVYDENPKECDD 3
LIKDRYG GSE+VVY+E+ KE DD
Sbjct: 115 ALIKDRYGHGSEFVVYNEDSKERDD 139
>ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X3
[Elaeis guineensis]
Length = 2067
Score = 85.9 bits (211), Expect = 2e-16
Identities = 58/145 (40%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Frame = -1
Query: 428 MAVKEKGKQIAGKA-QASSASTSSGKRKKVVS--RGPGDQRRKRRAGVLQFFXXXXXXXX 258
MA+K KGKQ+AGKA A++AS+SSGKRKK + G +R+K+R GVLQFF
Sbjct: 1 MALKGKGKQVAGKALDATAASSSSGKRKKPAAEEEASGGRRKKKRPGVLQFF------DD 54
Query: 257 XXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXX 78
DF +S ++ R GK +PF +K
Sbjct: 55 AAVDADSDDEDEDLDLGEEDADLDFMDASKSGNEDIRPVGKSHPVPFFLKEEELSGDELE 114
Query: 77 XLIKDRYGRGSEYVVYDENPKECDD 3
LIKDRYG GSE+VVY+E+ KE DD
Sbjct: 115 ALIKDRYGHGSEFVVYNEDSKERDD 139
>ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2
[Elaeis guineensis]
Length = 2068
Score = 85.9 bits (211), Expect = 2e-16
Identities = 58/145 (40%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Frame = -1
Query: 428 MAVKEKGKQIAGKA-QASSASTSSGKRKKVVS--RGPGDQRRKRRAGVLQFFXXXXXXXX 258
MA+K KGKQ+AGKA A++AS+SSGKRKK + G +R+K+R GVLQFF
Sbjct: 1 MALKGKGKQVAGKALDATAASSSSGKRKKPAAEEEASGGRRKKKRPGVLQFF----DDAA 56
Query: 257 XXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXX 78
DF +S ++ R GK +PF +K
Sbjct: 57 VDADSDDEDEDLDLGEEDADLVTDFMDASKSGNEDIRPVGKSHPVPFFLKEEELSGDELE 116
Query: 77 XLIKDRYGRGSEYVVYDENPKECDD 3
LIKDRYG GSE+VVY+E+ KE DD
Sbjct: 117 ALIKDRYGHGSEFVVYNEDSKERDD 141
>ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1
[Elaeis guineensis]
Length = 2069
Score = 85.9 bits (211), Expect = 2e-16
Identities = 58/145 (40%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Frame = -1
Query: 428 MAVKEKGKQIAGKA-QASSASTSSGKRKKVVS--RGPGDQRRKRRAGVLQFFXXXXXXXX 258
MA+K KGKQ+AGKA A++AS+SSGKRKK + G +R+K+R GVLQFF
Sbjct: 1 MALKGKGKQVAGKALDATAASSSSGKRKKPAAEEEASGGRRKKKRPGVLQFF----DDAA 56
Query: 257 XXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXX 78
DF +S ++ R GK +PF +K
Sbjct: 57 VDADSDDEDEDLDLGEEDADLVTDFMDASKSGNEDIRPVGKSHPVPFFLKEEELSGDELE 116
Query: 77 XLIKDRYGRGSEYVVYDENPKECDD 3
LIKDRYG GSE+VVY+E+ KE DD
Sbjct: 117 ALIKDRYGHGSEFVVYNEDSKERDD 141
>ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 1808
Score = 77.0 bits (188), Expect = 3e-13
Identities = 52/140 (37%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Frame = -1
Query: 422 VKEKGKQIAGKAQASSASTSSGKRKKVVSRGPGD-QRRKRRAGVLQFFXXXXXXXXXXXX 246
+K KGKQ+ GK AS+AS+SS KRK S PG ++R+RR GVLQFF
Sbjct: 1 MKGKGKQVVGKVAASAASSSSVKRKTAASENPGGCRKRRRRPGVLQFF-----DDAAVDA 55
Query: 245 XXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXXXLIK 66
DF+ G+ E K+ G+ +LPF VK LI
Sbjct: 56 DSDCDNKEESEVDEKITDLDFADDGKYENKKITGDGQSHHLPFFVK-EELSGDELEELIN 114
Query: 65 DRYGRGSEYVVYDENPKECD 6
DRY GSE+V Y+++ ECD
Sbjct: 115 DRYAHGSEHVTYNDDSAECD 134
>ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 1809
Score = 77.0 bits (188), Expect = 3e-13
Identities = 52/140 (37%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Frame = -1
Query: 422 VKEKGKQIAGKAQASSASTSSGKRKKVVSRGPGD-QRRKRRAGVLQFFXXXXXXXXXXXX 246
+K KGKQ+ GK AS+AS+SS KRK S PG ++R+RR GVLQFF
Sbjct: 1 MKGKGKQVVGKVAASAASSSSVKRKTAASENPGGCRKRRRRPGVLQFF----DDAAVDAD 56
Query: 245 XXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXXXLIK 66
DF+ G+ E K+ G+ +LPF VK LI
Sbjct: 57 SDCDNKEESEVDEKITDLVDFADDGKYENKKITGDGQSHHLPFFVK-EELSGDELEELIN 115
Query: 65 DRYGRGSEYVVYDENPKECD 6
DRY GSE+V Y+++ ECD
Sbjct: 116 DRYAHGSEHVTYNDDSAECD 135
>ref|XP_020258675.1| protein RNA-directed DNA methylation 3, partial [Asparagus
officinalis]
Length = 1734
Score = 61.6 bits (148), Expect = 6e-08
Identities = 38/101 (37%), Positives = 45/101 (44%)
Frame = -1
Query: 314 RKRRAGVLQFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGK 135
RKRR+GVLQFF + K+F+ AGK
Sbjct: 2 RKRRSGVLQFFDDAAEDDGYEEDEENEGQDDLVYDDKDLNLDI----NKESSKDFKGAGK 57
Query: 134 PQYLPFLVKXXXXXXXXXXXLIKDRYGRGSEYVVYDENPKE 12
YLP VK LIKDRYG+GSEYVVYDE+PK+
Sbjct: 58 SPYLPIFVKEEEVSGDELEELIKDRYGKGSEYVVYDEDPKQ 98
>gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas comosus]
Length = 1701
Score = 60.8 bits (146), Expect = 1e-07
Identities = 50/151 (33%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Frame = -1
Query: 428 MAVKEKGKQIAGKAQASSASTSSGKRKKVVS---RGPGDQRRKR------RAGVLQFFXX 276
MAVK KGKQ+A SS S++S KRK + +G G R R GVLQFF
Sbjct: 1 MAVKGKGKQVA-----SSPSSASAKRKNPAAEAAQGSGGAASSRGRAKRGRPGVLQFFDD 55
Query: 275 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXX 96
F ++E ++ + +P +LPF VK
Sbjct: 56 AAMDADDDELESGGEDAEED----------FPDECKAENEDLKGTARPPHLPFFVKEEEL 105
Query: 95 XXXXXXXLIKDRYGRGSEYVVYDENPKECDD 3
LIKDRYGR S+YVV+ E+ KE D
Sbjct: 106 SGDELEELIKDRYGRSSKYVVHAEDSKESGD 136
>ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isoform X4 [Ananas comosus]
Length = 1705
Score = 60.8 bits (146), Expect = 1e-07
Identities = 50/151 (33%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Frame = -1
Query: 428 MAVKEKGKQIAGKAQASSASTSSGKRKKVVS---RGPGDQRRKR------RAGVLQFFXX 276
MAVK KGKQ+A SS S++S KRK + +G G R R GVLQFF
Sbjct: 1 MAVKGKGKQVA-----SSPSSASAKRKNPAAEAAQGSGGAASSRGRAKRGRPGVLQFFDD 55
Query: 275 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXX 96
F ++E ++ + +P +LPF VK
Sbjct: 56 AAMDADDDELESGGEDAEED----------FPDECKAENEDLKGTARPPHLPFFVKEEEL 105
Query: 95 XXXXXXXLIKDRYGRGSEYVVYDENPKECDD 3
LIKDRYGR S+YVV+ E+ KE D
Sbjct: 106 SGDELEELIKDRYGRSSKYVVHAEDSKESGD 136
>ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isoform X2 [Ananas comosus]
Length = 1714
Score = 60.8 bits (146), Expect = 1e-07
Identities = 50/151 (33%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Frame = -1
Query: 428 MAVKEKGKQIAGKAQASSASTSSGKRKKVVS---RGPGDQRRKR------RAGVLQFFXX 276
MAVK KGKQ+A SS S++S KRK + +G G R R GVLQFF
Sbjct: 1 MAVKGKGKQVA-----SSPSSASAKRKNPAAEAAQGSGGAASSRGRAKRGRPGVLQFFDD 55
Query: 275 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXX 96
F ++E ++ + +P +LPF VK
Sbjct: 56 AAMDADDDELESGGEDAEED----------FPDECKAENEDLKGTARPPHLPFFVKEEEL 105
Query: 95 XXXXXXXLIKDRYGRGSEYVVYDENPKECDD 3
LIKDRYGR S+YVV+ E+ KE D
Sbjct: 106 SGDELEELIKDRYGRSSKYVVHAEDSKESGD 136
>ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isoform X3 [Ananas comosus]
Length = 1714
Score = 60.8 bits (146), Expect = 1e-07
Identities = 50/151 (33%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Frame = -1
Query: 428 MAVKEKGKQIAGKAQASSASTSSGKRKKVVS---RGPGDQRRKR------RAGVLQFFXX 276
MAVK KGKQ+A SS S++S KRK + +G G R R GVLQFF
Sbjct: 1 MAVKGKGKQVA-----SSPSSASAKRKNPAAEAAQGSGGAASSRGRAKRGRPGVLQFFDD 55
Query: 275 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXX 96
F ++E ++ + +P +LPF VK
Sbjct: 56 AAMDADDDELESGGEDAEED----------FPDECKAENEDLKGTARPPHLPFFVKEEEL 105
Query: 95 XXXXXXXLIKDRYGRGSEYVVYDENPKECDD 3
LIKDRYGR S+YVV+ E+ KE D
Sbjct: 106 SGDELEELIKDRYGRSSKYVVHAEDSKESGD 136
>ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isoform X1 [Ananas comosus]
Length = 1715
Score = 60.8 bits (146), Expect = 1e-07
Identities = 50/151 (33%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Frame = -1
Query: 428 MAVKEKGKQIAGKAQASSASTSSGKRKKVVS---RGPGDQRRKR------RAGVLQFFXX 276
MAVK KGKQ+A SS S++S KRK + +G G R R GVLQFF
Sbjct: 1 MAVKGKGKQVA-----SSPSSASAKRKNPAAEAAQGSGGAASSRGRAKRGRPGVLQFFDD 55
Query: 275 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFSKGGRSEGKEFRSAGKPQYLPFLVKXXXX 96
F ++E ++ + +P +LPF VK
Sbjct: 56 AAMDADDDELESGGEDAEED----------FPDECKAENEDLKGTARPPHLPFFVKEEEL 105
Query: 95 XXXXXXXLIKDRYGRGSEYVVYDENPKECDD 3
LIKDRYGR S+YVV+ E+ KE D
Sbjct: 106 SGDELEELIKDRYGRSSKYVVHAEDSKESGD 136
>gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagus officinalis]
Length = 1710
Score = 59.7 bits (143), Expect = 3e-07
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = -1
Query: 170 RSEGKEFRSAGKPQYLPFLVKXXXXXXXXXXXLIKDRYGRGSEYVVYDENPKE 12
+ K+F+ AGK YLP VK LIKDRYG+GSEYVVYDE+PK+
Sbjct: 27 KESSKDFKGAGKSPYLPIFVKEEEVSGDELEELIKDRYGKGSEYVVYDEDPKQ 79