BLASTX nr result
ID: Ophiopogon23_contig00004485
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00004485
(793 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP57007.1| Cytochrome b6-f complex subunit, cytochrome b6 [... 84 2e-15
ref|XP_008467004.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b... 70 2e-10
ref|YP_009456091.1| cytochrome b6 (chloroplast) [Momordica chara... 67 1e-09
ref|XP_022156558.1| LOW QUALITY PROTEIN: uncharacterized protein... 65 9e-09
gb|KHG09936.1| hypothetical protein F383_14565 [Gossypium arboreum] 59 4e-08
ref|YP_009380673.1| hypothetical protein AEK19_MT0281 (mitochond... 59 7e-08
ref|YP_009433341.1| cytochrome b6 (chloroplast) [Zostera marina]... 62 8e-08
gb|ABG21914.1| transposon protein, putative, unclassified [Oryza... 60 5e-07
ref|WP_051747395.1| cytochrome b6 [Staphylococcus aureus] 57 6e-06
ref|YP_009130869.1| cytochrome b6 (chloroplast) [Gossypium turne... 57 6e-06
ref|YP_008992839.1| cytochrome b6 (chloroplast) [Gossypium stock... 57 6e-06
ref|YP_008992753.1| cytochrome b6 (chloroplast) [Gossypium longi... 57 6e-06
ref|YP_008992667.1| cytochrome b6 (chloroplast) [Gossypium herba... 57 6e-06
ref|YP_004286034.1| cytochrome b6 [Gossypium thurberi] >gi|57075... 57 6e-06
>emb|CDP57007.1| Cytochrome b6-f complex subunit, cytochrome b6 [Staphylococcus
aureus subsp. aureus]
Length = 267
Score = 84.3 bits (207), Expect = 2e-15
Identities = 40/49 (81%), Positives = 40/49 (81%)
Frame = -1
Query: 148 KF*TFYSISVEIRICVFLFEPYEMKVSYTVLGGGSSWITYLNKVYDWFE 2
KF TFYSISV VFLFE YEMK SYTVLGGGSSW TYLNKVYDWFE
Sbjct: 13 KFQTFYSISVSANTWVFLFELYEMKFSYTVLGGGSSWFTYLNKVYDWFE 61
>ref|XP_008467004.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b6, partial [Cucumis
melo]
Length = 260
Score = 70.1 bits (170), Expect = 2e-10
Identities = 33/42 (78%), Positives = 33/42 (78%)
Frame = -1
Query: 127 ISVEIRICVFLFEPYEMKVSYTVLGGGSSWITYLNKVYDWFE 2
ISV I VFLFEPYE K SYTVL GGS W TYLNKVYDWFE
Sbjct: 13 ISVTSGIWVFLFEPYETKFSYTVLRGGSPWFTYLNKVYDWFE 54
>ref|YP_009456091.1| cytochrome b6 (chloroplast) [Momordica charantia]
gb|AUJ21858.1| cytochrome b6 (chloroplast) [Momordica charantia]
Length = 245
Score = 67.4 bits (163), Expect = 1e-09
Identities = 30/36 (83%), Positives = 30/36 (83%)
Frame = -1
Query: 109 ICVFLFEPYEMKVSYTVLGGGSSWITYLNKVYDWFE 2
I VFLFEPYE K SYTVL GGS W TYLNKVYDWFE
Sbjct: 4 IWVFLFEPYETKFSYTVLRGGSPWFTYLNKVYDWFE 39
>ref|XP_022156558.1| LOW QUALITY PROTEIN: uncharacterized protein LOC111023434
[Momordica charantia]
Length = 245
Score = 65.1 bits (157), Expect = 9e-09
Identities = 29/36 (80%), Positives = 29/36 (80%)
Frame = -1
Query: 109 ICVFLFEPYEMKVSYTVLGGGSSWITYLNKVYDWFE 2
I VFLFEPYE K SY VL GGS W TYLNKVYDWFE
Sbjct: 4 IWVFLFEPYETKFSYRVLRGGSPWFTYLNKVYDWFE 39
>gb|KHG09936.1| hypothetical protein F383_14565 [Gossypium arboreum]
Length = 39
Score = 58.5 bits (140), Expect = 4e-08
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +1
Query: 682 INIRRGRIILIEMTGPFSVLSIGSIITSHTLIFRKYR 792
+ IRR + I I+MT PFSVLSIGSIITSHTLIFRKYR
Sbjct: 1 MTIRRDKTISIKMTDPFSVLSIGSIITSHTLIFRKYR 37
>ref|YP_009380673.1| hypothetical protein AEK19_MT0281 (mitochondrion) [Utricularia
reniformis]
gb|ART30557.1| hypothetical protein AEK19_MT0281 (mitochondrion) [Utricularia
reniformis]
Length = 77
Score = 58.9 bits (141), Expect = 7e-08
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = -1
Query: 772 VCDXXXXXXXXIQRMVLSSLSR*FYPVGYLFEYLEHGIDRIDQEKKYLNYDSYL--LFRP 599
+CD +QR+ LS L R FY VGY EYLEH + I+ K YLNYDSYL + RP
Sbjct: 1 MCDLLELILLIVQRIGLSPLYRWFYFVGYFVEYLEHELYEINSIKNYLNYDSYLIIIIRP 60
Query: 598 RNRTQKK 578
R R K+
Sbjct: 61 RVRITKR 67
>ref|YP_009433341.1| cytochrome b6 (chloroplast) [Zostera marina]
gb|ATD85248.1| cytochrome b6 (chloroplast) [Zostera marina]
Length = 244
Score = 62.4 bits (150), Expect = 8e-08
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = -1
Query: 115 IRICVFLFEPYEMKVSYTVLGGGSSWITYLNKVYDWFE 2
+ ICVFL EPYEMK SYTVL GG TYL+KVYDWFE
Sbjct: 1 MNICVFLLEPYEMKFSYTVLRGGYFCFTYLDKVYDWFE 38
>gb|ABG21914.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 263
Score = 60.5 bits (145), Expect = 5e-07
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -1
Query: 124 SVEIRICVFLFEPYEMKVSYTVLGGGSSWITYLNKVYDWFE 2
SV I + + L +PYEMK SYTVLGGG +TYLNKVYDWFE
Sbjct: 85 SVRIIVGLGLRQPYEMKFSYTVLGGGFGLVTYLNKVYDWFE 125
>ref|WP_051747395.1| cytochrome b6 [Staphylococcus aureus]
Length = 232
Score = 57.0 bits (136), Expect = 6e-06
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1
Query: 79 MKVSYTVLGGGSSWITYLNKVYDWFE 2
MK SYTVLGGGSSW TYLNKVYDWFE
Sbjct: 1 MKFSYTVLGGGSSWFTYLNKVYDWFE 26
>ref|YP_009130869.1| cytochrome b6 (chloroplast) [Gossypium turneri]
gb|AFH57604.1| cytochrome b6 (chloroplast) [Gossypium turneri]
Length = 232
Score = 57.0 bits (136), Expect = 6e-06
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1
Query: 79 MKVSYTVLGGGSSWITYLNKVYDWFE 2
MK SYTVLGGGSSW TYLNKVYDWFE
Sbjct: 1 MKFSYTVLGGGSSWFTYLNKVYDWFE 26
>ref|YP_008992839.1| cytochrome b6 (chloroplast) [Gossypium stocksii]
gb|ADZ74678.1| cytochrome b6 (chloroplast) [Gossypium stocksii]
Length = 234
Score = 57.0 bits (136), Expect = 6e-06
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1
Query: 79 MKVSYTVLGGGSSWITYLNKVYDWFE 2
MK SYTVLGGGSSW TYLNKVYDWFE
Sbjct: 3 MKFSYTVLGGGSSWFTYLNKVYDWFE 28
>ref|YP_008992753.1| cytochrome b6 (chloroplast) [Gossypium longicalyx]
gb|ADZ74591.1| cytochrome b6 (chloroplast) [Gossypium longicalyx]
Length = 234
Score = 57.0 bits (136), Expect = 6e-06
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1
Query: 79 MKVSYTVLGGGSSWITYLNKVYDWFE 2
MK SYTVLGGGSSW TYLNKVYDWFE
Sbjct: 3 MKFSYTVLGGGSSWFTYLNKVYDWFE 28
>ref|YP_008992667.1| cytochrome b6 (chloroplast) [Gossypium herbaceum]
gb|ADZ74507.1| cytochrome b6 (chloroplast) [Gossypium herbaceum]
Length = 234
Score = 57.0 bits (136), Expect = 6e-06
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1
Query: 79 MKVSYTVLGGGSSWITYLNKVYDWFE 2
MK SYTVLGGGSSW TYLNKVYDWFE
Sbjct: 3 MKFSYTVLGGGSSWFTYLNKVYDWFE 28
>ref|YP_004286034.1| cytochrome b6 [Gossypium thurberi]
ref|YP_008992494.1| cytochrome b6 (chloroplast) [Gossypium anomalum]
ref|YP_008992580.1| cytochrome b6 (chloroplast) [Gossypium bickii]
ref|YP_008992925.1| cytochrome b6 (chloroplast) [Gossypium sturtianum]
gb|ADD62318.1| cytochrome b6 (chloroplast) [Gossypium thurberi]
gb|ADZ74362.1| cytochrome b6 (chloroplast) [Gossypium anomalum]
gb|ADZ74450.1| cytochrome b6 (chloroplast) [Gossypium bickii]
gb|ADZ74765.1| cytochrome b6 (chloroplast) [Gossypium sturtianum]
Length = 234
Score = 57.0 bits (136), Expect = 6e-06
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1
Query: 79 MKVSYTVLGGGSSWITYLNKVYDWFE 2
MK SYTVLGGGSSW TYLNKVYDWFE
Sbjct: 3 MKFSYTVLGGGSSWFTYLNKVYDWFE 28