BLASTX nr result
ID: Ophiopogon23_contig00004144
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ophiopogon23_contig00004144 (1802 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asp... 1027 0.0 ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V sub... 810 0.0 ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 807 0.0 gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial ... 806 0.0 ref|XP_018679039.1| PREDICTED: DNA-directed RNA polymerase V sub... 776 0.0 ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V sub... 776 0.0 ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ana... 742 0.0 gb|AQK60584.1| DNA-directed RNA polymerase V subunit 1, partial ... 709 0.0 gb|AQK60579.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] 709 0.0 ref|XP_004951807.1| DNA-directed RNA polymerase V subunit 1 [Set... 721 0.0 gb|AQK60587.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] 709 0.0 gb|PKU59438.1| DNA-directed RNA polymerase E subunit 1 [Dendrobi... 696 0.0 gb|AQK60574.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] 709 0.0 gb|AQK60567.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] 709 0.0 gb|AQK60573.1| DNA-directed RNA polymerase V subunit 1 [Zea mays... 709 0.0 ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V sub... 710 0.0 gb|AQK60589.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] 709 0.0 gb|AQK60576.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] 709 0.0 gb|KQL28710.1| hypothetical protein SETIT_016066mg [Setaria ital... 712 0.0 gb|AQK60578.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] 709 0.0 >ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis] ref|XP_020269147.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis] Length = 1945 Score = 1027 bits (2655), Expect = 0.0 Identities = 503/600 (83%), Positives = 546/600 (91%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QLF +GKLYSKALV+D++ FVS++S + PSSEA+GLVK+ L HGL PFE FVHSISA Sbjct: 712 QLFVKGKLYSKALVEDIHHLFVSRFSTTDVSPSSEAHGLVKNPLFHGLNPFEDFVHSISA 771 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 REVIIRSSRGLTEPG+LFKNLMAILRDVV+CYDGTVRNVCSNSIIQ YELDE + V Sbjct: 772 REVIIRSSRGLTEPGVLFKNLMAILRDVVICYDGTVRNVCSNSIIQLAYELDEA-RAECV 830 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 + AGEPVGVLAATAIS PAYKAVLDSS+STNSSWE MKEILLCKA YQN IDRR+VLYL Sbjct: 831 ATAGEPVGVLAATAISNPAYKAVLDSSSSTNSSWELMKEILLCKAAYQNAFIDRRIVLYL 890 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+CCCGKKFCREN+ALAVQNCLRSV LKHCA+D SIEYQKQI LPNS+ T SGLVGH+HL Sbjct: 891 NDCCCGKKFCRENSALAVQNCLRSVTLKHCAIDFSIEYQKQICLPNSA-TVSGLVGHLHL 949 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D RLKILNQ TDG+LHKCQEV +GHTRKKGHLSNI RRTFLS+SE C S Q ND NLSE Sbjct: 950 DTTRLKILNQNTDGVLHKCQEVIRGHTRKKGHLSNILRRTFLSASEDCSSLQSNDANLSE 1009 Query: 901 FPCLQFSYFAGAVDETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVS 1080 FPCLQFSY AG VDETL+ GMHIMINTICPILLDTI+KGDPR+D VNIIW+GPD+TSWVS Sbjct: 1010 FPCLQFSYCAGGVDETLQQGMHIMINTICPILLDTIIKGDPRIDTVNIIWSGPDSTSWVS 1069 Query: 1081 SPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFG 1260 +P ++GELALEVVVQKVAA+K GDAWRIVLDACLPV+HLI+TTRSIPYGIQQIKE+FG Sbjct: 1070 NPDNPVRGELALEVVVQKVAAKKNGDAWRIVLDACLPVIHLINTTRSIPYGIQQIKEIFG 1129 Query: 1261 ISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQV 1440 ISCAFDQSVQRLSK IRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFK+LFRSLKVQV Sbjct: 1130 ISCAFDQSVQRLSKSIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKSLFRSLKVQV 1189 Query: 1441 PFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCN 1620 PFTEATLLTPMKCFE+AAEKCHTD+LGS+VSSVSWGKHVA+GTGTHFEVIWG K QV CN Sbjct: 1190 PFTEATLLTPMKCFEKAAEKCHTDSLGSIVSSVSWGKHVAVGTGTHFEVIWGHKNQVACN 1249 Query: 1621 EDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 1800 EDVGKDVYDLLAWVREPQE+DLPGACLGSDI+DFLDDFQ DDMPLSPEPN+ EKPTFED Sbjct: 1250 EDVGKDVYDLLAWVREPQERDLPGACLGSDIDDFLDDFQGDDMPLSPEPNNICEKPTFED 1309 >ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis guineensis] ref|XP_010932323.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis guineensis] ref|XP_019708936.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis guineensis] ref|XP_019708937.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis guineensis] Length = 1708 Score = 810 bits (2093), Expect = 0.0 Identities = 404/603 (66%), Positives = 488/603 (80%), Gaps = 3/603 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QLFDRGKLYS+ALV+D +++FV+KYS S EAYGLVK+ HGL P+E VH+IS+ Sbjct: 710 QLFDRGKLYSRALVEDCFTNFVNKYSTSGADHSCEAYGLVKNCFFHGLNPYEELVHAISS 769 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 REVI+RSSRGLTEPG LFKNLMAILRDV++CYDG+VRNVCSNSIIQFEY D+G S +V Sbjct: 770 REVIVRSSRGLTEPGTLFKNLMAILRDVIICYDGSVRNVCSNSIIQFEYGEDDGANSLNV 829 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 SPAGEPVGVLAATAIS PAYKAVL+SS S NSSWE MKEILLCK ++N + DRRV+LYL Sbjct: 830 SPAGEPVGVLAATAISNPAYKAVLESSQSNNSSWELMKEILLCKVTFKNVVTDRRVILYL 889 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C CGKKFC+ENAA+AVQNCL+ V LK CA D SIEYQK+I L +SS T SGLVGHIHL Sbjct: 890 NDCLCGKKFCKENAAIAVQNCLKRVTLKDCACDFSIEYQKEISLRDSSETTSGLVGHIHL 949 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D MRLK+LN++ D IL KCQ+V G+ +KKG LS+ FRR LS SECC ++QP+ GNLS Sbjct: 950 DKMRLKLLNRSPDEILRKCQDVIFGYGKKKGKLSHFFRRIILSLSECCSTRQPDVGNLSP 1009 Query: 901 FPCLQFSYFAGAVD---ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATS 1071 FPCLQFSY + E+LE +H+M NTICPILLDTI+KGDPRV NI+WTGPDATS Sbjct: 1010 FPCLQFSYRDQSTTPDCESLEGAIHVMANTICPILLDTIIKGDPRVHEANIVWTGPDATS 1069 Query: 1072 WVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKE 1251 WV + +TLKGE+A+EVVV+K A R+ GDAWR V+DACLPV+HLI+T RSIPYGIQQ++E Sbjct: 1070 WVRNSCKTLKGEVAIEVVVEKDAVRRNGDAWRTVIDACLPVIHLINTRRSIPYGIQQLQE 1129 Query: 1252 LFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLK 1431 L GISCAFDQ+VQRLS I V+KGV+K HL+LV N+MTCTGNLIGFNT+G+KALFRSLK Sbjct: 1130 LLGISCAFDQTVQRLSASITKVAKGVLKGHLILVANSMTCTGNLIGFNTAGYKALFRSLK 1189 Query: 1432 VQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQV 1611 VQVPFTEATL+TPMKCFERAAEKCHTD+L SVVSS WGKHVA+GTG+ F+++W KQQ+ Sbjct: 1190 VQVPFTEATLITPMKCFERAAEKCHTDSLVSVVSSCLWGKHVAIGTGSPFQILW-NKQQM 1248 Query: 1612 PCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPT 1791 N+++GK YD L VR +++ C D++D L+ +N+++ LSPE E+ T Sbjct: 1249 AENQNIGKGFYDFLELVRTSSQREAGDGC-SLDVDD-LEVNENNEVCLSPE--IGFEELT 1304 Query: 1792 FED 1800 F+D Sbjct: 1305 FDD 1307 >ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit 1-like [Phoenix dactylifera] Length = 1656 Score = 807 bits (2084), Expect = 0.0 Identities = 404/603 (66%), Positives = 486/603 (80%), Gaps = 3/603 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QLFDRGKLYS+ALV+D +++FV+KYS S EAYGLVK+ HGL P+E VHSIS+ Sbjct: 668 QLFDRGKLYSRALVEDCFTNFVNKYSTSGADHSCEAYGLVKNCFFHGLNPYEELVHSISS 727 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 REVI+RSSRGLTEPG LFKNLMAILRDV++CYDG+VRNVCSNS+IQFEY D+G S +V Sbjct: 728 REVIVRSSRGLTEPGTLFKNLMAILRDVIICYDGSVRNVCSNSVIQFEYGEDDGANSLNV 787 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 SPAGEPVGVLAATAIS PAYKAVL+SS S NSSWE MKEILLCK ++N + DRRV+LYL Sbjct: 788 SPAGEPVGVLAATAISNPAYKAVLESSQSNNSSWELMKEILLCKVTFKNVVTDRRVILYL 847 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C CGKKFC+ENAA+ VQNCL+ V LK CA D SIEYQK+I L +SS T SGLVGHIHL Sbjct: 848 NDCFCGKKFCKENAAITVQNCLKRVTLKDCACDFSIEYQKEISLRDSSETTSGLVGHIHL 907 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D MRLK+LN++ D IL KCQ+V G+ +KKG LS+ FRR L SECC ++QP+ GNLS Sbjct: 908 DKMRLKLLNRSPDEILRKCQDVIFGYGKKKGKLSHFFRRIILLVSECCSTRQPDVGNLSP 967 Query: 901 FPCLQFSY---FAGAVDETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATS 1071 FPCLQFSY A E+LE G+H+M NTICPILLDTI+KGDPRV NI+WTGP ATS Sbjct: 968 FPCLQFSYCDQTATPDCESLERGIHVMANTICPILLDTIIKGDPRVREANIVWTGPYATS 1027 Query: 1072 WVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKE 1251 WV + +TLKGE+A+EVVV+K A+R+ GDAWR V+DACLPVMHLI+T RSIPYGIQQ++E Sbjct: 1028 WVRNSCKTLKGEVAVEVVVEKDASRRHGDAWRTVIDACLPVMHLINTRRSIPYGIQQLQE 1087 Query: 1252 LFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLK 1431 L GISCAFDQ+VQRLS I MV+KGV+K+HL+LV N+M+CTGNLIGFNT+G+KAL RSLK Sbjct: 1088 LLGISCAFDQAVQRLSASITMVAKGVLKDHLILVANSMSCTGNLIGFNTAGYKALXRSLK 1147 Query: 1432 VQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQV 1611 VQVPFTEATL+TPMKCFERAAEKCHTD+L SVVSS WGKHVA+GTG+ F+++W K+Q+ Sbjct: 1148 VQVPFTEATLITPMKCFERAAEKCHTDSLTSVVSSCLWGKHVAIGTGSPFQILW-NKRQM 1206 Query: 1612 PCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPT 1791 N+++GK YD L VR + + C D++D L +ND++ LSPE EK T Sbjct: 1207 AENQNIGKGFYDFLELVRTSSQGEAGNGC-SVDVDD-LGVNENDEVCLSPE--IGFEKLT 1262 Query: 1792 FED 1800 F+D Sbjct: 1263 FDD 1265 >gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial [Cocos nucifera] Length = 1673 Score = 806 bits (2082), Expect = 0.0 Identities = 403/603 (66%), Positives = 486/603 (80%), Gaps = 3/603 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QLFDRGKLYS ALV+D +++FV+KYS S EAYGLVK+ HGL P+E VH+IS+ Sbjct: 710 QLFDRGKLYSGALVEDCFTNFVNKYSTSGADHSCEAYGLVKNCFFHGLNPYEELVHAISS 769 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 REVI+RSSRGLTEPG LFKNLMAILRDV++CYDG+VRNVCSNSIIQFEY D+G S +V Sbjct: 770 REVIVRSSRGLTEPGTLFKNLMAILRDVIICYDGSVRNVCSNSIIQFEYGEDDGANSLNV 829 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 SPAGEPVGVLAATAIS PAYKAVL+SS S NSSWE MKEILLCK ++N + DRRV+LYL Sbjct: 830 SPAGEPVGVLAATAISNPAYKAVLESSQSNNSSWELMKEILLCKVMFKNVVTDRRVILYL 889 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C CGKKFC+ENAA+AVQNCL+ V LK CA D SIEYQK+I L +SS T SGLVGHIHL Sbjct: 890 NDCFCGKKFCKENAAIAVQNCLKRVTLKDCACDFSIEYQKEISLRDSSETTSGLVGHIHL 949 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D M LK+LN++ D IL KCQ+V G+ +KKG LS+ FRR LS SECC ++QP+ GNLS Sbjct: 950 DKMGLKLLNRSPDEILRKCQDVIFGYAKKKGKLSHFFRRIILSLSECCCTRQPDVGNLSP 1009 Query: 901 FPCLQFSYFAGAVD---ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATS 1071 FPCLQFSY + E+LE +H+M NTICPILLDTI+KGDPRV NI+W GPDATS Sbjct: 1010 FPCLQFSYCDQSATPDCESLEGAIHVMANTICPILLDTIIKGDPRVYDANIVWIGPDATS 1069 Query: 1072 WVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKE 1251 WV + +TLKGE+A+EVVV+K A R+ GDAWR V+DACLPVMHLI+T RSIPYGIQQ++E Sbjct: 1070 WVRNSCKTLKGEVAIEVVVEKDAVRRNGDAWRTVMDACLPVMHLINTRRSIPYGIQQLQE 1129 Query: 1252 LFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLK 1431 L GISCAFDQ+VQRLS I V+KGV+K+HL+LV N+MTCTGNLIGFNT+G+KALFRSLK Sbjct: 1130 LLGISCAFDQTVQRLSASITKVAKGVLKDHLILVANSMTCTGNLIGFNTAGYKALFRSLK 1189 Query: 1432 VQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQV 1611 VQVPFTEATL+TPMKCFERAAEKCHTD+L SVVSS WGKHVA+GTG+ F+++W KQQ+ Sbjct: 1190 VQVPFTEATLITPMKCFERAAEKCHTDSLASVVSSCLWGKHVAIGTGSPFQILW-NKQQM 1248 Query: 1612 PCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPT 1791 N+++GK YD L VR +++ C D++D L+ +N+++ LSPE E+ T Sbjct: 1249 AENQNIGKGFYDFLELVRTSSQREAGDGC-SLDVDD-LEANENNEVCLSPE--IGFEELT 1304 Query: 1792 FED 1800 F+D Sbjct: 1305 FDD 1307 >ref|XP_018679039.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2 [Musa acuminata subsp. malaccensis] Length = 1444 Score = 776 bits (2003), Expect = 0.0 Identities = 391/603 (64%), Positives = 470/603 (77%), Gaps = 3/603 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QLFD+GK YS+ALVDD + +FVSK+S E SEAYGLVK+S HGL P+E VH+IS+ Sbjct: 709 QLFDQGKYYSRALVDDCFLNFVSKHSAGEVDHPSEAYGLVKNSFFHGLNPYEMLVHAISS 768 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 REVI+RSSRGLTEPG LFKNLMAILRDVV+CYDG+VRNVC+ S++Q EY DEGV S + Sbjct: 769 REVIVRSSRGLTEPGTLFKNLMAILRDVVICYDGSVRNVCTGSLVQLEYVDDEGVNSVNT 828 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 PAG+PVGVLAATAIS AYKAVLDSS S NSSWE MKEILLCK +Y+ND+ DRRV+LYL Sbjct: 829 PPAGDPVGVLAATAISNLAYKAVLDSSQSNNSSWELMKEILLCKVSYKNDVSDRRVILYL 888 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+CCC K+FC+ENAA V NCL+ V LK CA + IEYQKQIG+ +SS T SGLVGHIHL Sbjct: 889 NDCCCQKRFCKENAAFTVLNCLKRVTLKDCAHEFLIEYQKQIGVCDSSVTTSGLVGHIHL 948 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D M+LK+LN D ILHKCQ V + +KKG LS+ FRR FLS+ +CC +QP+DGNL Sbjct: 949 DKMQLKLLNINPDDILHKCQAVIFSYGKKKGQLSHFFRRIFLSTCKCCSIKQPSDGNLCH 1008 Query: 901 FPCLQFSYF---AGAVDETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATS 1071 PCLQFSY A + +LE +H+M TICPILLDTIVKGDPRV V I+W GPDATS Sbjct: 1009 LPCLQFSYADANASQNNISLERAIHVMSETICPILLDTIVKGDPRVHEVKIVWIGPDATS 1068 Query: 1072 WVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKE 1251 WV S +TLKG+L LEVV+ + A R+ GDAWR VLDACLPVMHLIDT RSIPYGIQQI+E Sbjct: 1069 WVGSSCKTLKGDLGLEVVLGQDAVRQSGDAWRTVLDACLPVMHLIDTGRSIPYGIQQIQE 1128 Query: 1252 LFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLK 1431 + GISCAFDQ+VQRLSK I+MVSKGV+KEHL+LV N+MTCTG LIGFNT G+KALFRS K Sbjct: 1129 VLGISCAFDQAVQRLSKSIKMVSKGVMKEHLLLVANSMTCTGKLIGFNTGGYKALFRSFK 1188 Query: 1432 VQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQV 1611 V+VPFT ATL TPMKCFERAAEKC D+L SVVSS SWGK+VA+GTG F+++W K+Q+ Sbjct: 1189 VEVPFTAATLFTPMKCFERAAEKCQVDSLASVVSSCSWGKNVAIGTGAPFQILW-DKKQM 1247 Query: 1612 PCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPT 1791 N+D+GK VYD L +RE + G L +D+++ ++ + + LSP+ + T Sbjct: 1248 AMNKDIGKGVYDFLELLRETSSGEATGRYL-ADVDELAEE---NGICLSPDLDGC---MT 1300 Query: 1792 FED 1800 F+D Sbjct: 1301 FDD 1303 >ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa acuminata subsp. malaccensis] ref|XP_009391190.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa acuminata subsp. malaccensis] Length = 1738 Score = 776 bits (2003), Expect = 0.0 Identities = 391/603 (64%), Positives = 470/603 (77%), Gaps = 3/603 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QLFD+GK YS+ALVDD + +FVSK+S E SEAYGLVK+S HGL P+E VH+IS+ Sbjct: 709 QLFDQGKYYSRALVDDCFLNFVSKHSAGEVDHPSEAYGLVKNSFFHGLNPYEMLVHAISS 768 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 REVI+RSSRGLTEPG LFKNLMAILRDVV+CYDG+VRNVC+ S++Q EY DEGV S + Sbjct: 769 REVIVRSSRGLTEPGTLFKNLMAILRDVVICYDGSVRNVCTGSLVQLEYVDDEGVNSVNT 828 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 PAG+PVGVLAATAIS AYKAVLDSS S NSSWE MKEILLCK +Y+ND+ DRRV+LYL Sbjct: 829 PPAGDPVGVLAATAISNLAYKAVLDSSQSNNSSWELMKEILLCKVSYKNDVSDRRVILYL 888 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+CCC K+FC+ENAA V NCL+ V LK CA + IEYQKQIG+ +SS T SGLVGHIHL Sbjct: 889 NDCCCQKRFCKENAAFTVLNCLKRVTLKDCAHEFLIEYQKQIGVCDSSVTTSGLVGHIHL 948 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D M+LK+LN D ILHKCQ V + +KKG LS+ FRR FLS+ +CC +QP+DGNL Sbjct: 949 DKMQLKLLNINPDDILHKCQAVIFSYGKKKGQLSHFFRRIFLSTCKCCSIKQPSDGNLCH 1008 Query: 901 FPCLQFSYF---AGAVDETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATS 1071 PCLQFSY A + +LE +H+M TICPILLDTIVKGDPRV V I+W GPDATS Sbjct: 1009 LPCLQFSYADANASQNNISLERAIHVMSETICPILLDTIVKGDPRVHEVKIVWIGPDATS 1068 Query: 1072 WVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKE 1251 WV S +TLKG+L LEVV+ + A R+ GDAWR VLDACLPVMHLIDT RSIPYGIQQI+E Sbjct: 1069 WVGSSCKTLKGDLGLEVVLGQDAVRQSGDAWRTVLDACLPVMHLIDTGRSIPYGIQQIQE 1128 Query: 1252 LFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLK 1431 + GISCAFDQ+VQRLSK I+MVSKGV+KEHL+LV N+MTCTG LIGFNT G+KALFRS K Sbjct: 1129 VLGISCAFDQAVQRLSKSIKMVSKGVMKEHLLLVANSMTCTGKLIGFNTGGYKALFRSFK 1188 Query: 1432 VQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQV 1611 V+VPFT ATL TPMKCFERAAEKC D+L SVVSS SWGK+VA+GTG F+++W K+Q+ Sbjct: 1189 VEVPFTAATLFTPMKCFERAAEKCQVDSLASVVSSCSWGKNVAIGTGAPFQILW-DKKQM 1247 Query: 1612 PCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPT 1791 N+D+GK VYD L +RE + G L +D+++ ++ + + LSP+ + T Sbjct: 1248 AMNKDIGKGVYDFLELLRETSSGEATGRYL-ADVDELAEE---NGICLSPDLDGC---MT 1300 Query: 1792 FED 1800 F+D Sbjct: 1301 FDD 1303 >ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ananas comosus] Length = 1800 Score = 742 bits (1916), Expect = 0.0 Identities = 369/604 (61%), Positives = 462/604 (76%), Gaps = 4/604 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QLF GK YS LV+D +S FV+++S DK EAYGLVKSS +GL P+E VH+IS+ Sbjct: 712 QLFHEGKFYSSRLVEDCFSTFVNRFSTGGDKHPCEAYGLVKSSFYNGLNPYEELVHAISS 771 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 REV++RSSRGLTEPG LFKNLMAILRDVV+CYDG+VRNVCSNS+IQF+Y D+ V+ + Sbjct: 772 REVLVRSSRGLTEPGTLFKNLMAILRDVVICYDGSVRNVCSNSVIQFDYGDDDRVDLIGL 831 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 SP GEPVGVLAATAIS PAYKAVLDSS S NSSWE MKEILL K +Y+ND+ DRRV+LYL Sbjct: 832 SPPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMKEILLTKVSYKNDVNDRRVILYL 891 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C CGKKFC+E AALAVQ+CL+ V L+ C D IEYQK+I LP + SGLVGHIHL Sbjct: 892 NDCFCGKKFCKERAALAVQSCLKRVTLEDCVTDFLIEYQKEIILPGNPEPTSGLVGHIHL 951 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D M+L+ LN++ D +LH C+EV + +KKG S++F++ L +SECC Q+ D NLS Sbjct: 952 DKMQLESLNRSIDEVLHTCEEVILKNAKKKGQFSHLFKKITLMASECCSIQKAKDSNLSR 1011 Query: 901 FPCLQFSYFAGAVDETLEHG---MHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATS 1071 PCLQFSY V + E+ + ++ NT+ P LLDTIVKGDPRV ++W GPDATS Sbjct: 1012 TPCLQFSYCDENVAPSCEYFEGIVQVLANTVYPTLLDTIVKGDPRVHEAKVVWVGPDATS 1071 Query: 1072 WVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKE 1251 WV + TLKGELA+E+V++K AA GDAWR +DACLPVM LID RSIPYG+QQI+E Sbjct: 1072 WVRNSSNTLKGELAVEMVIEKSAAPHNGDAWRTAMDACLPVMRLIDARRSIPYGVQQIRE 1131 Query: 1252 LFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLK 1431 LFGISCAFDQ+V+R+S IR V+KGV+K+HL+LV ++MTCTG L GFNT G+KA FRSLK Sbjct: 1132 LFGISCAFDQAVERMSTSIRKVAKGVLKDHLILVASSMTCTGKLNGFNTGGYKATFRSLK 1191 Query: 1432 VQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQV 1611 VQVPFTEATL TPMKCFERAAEKCH+D+L S VSS SWGKHVALGTG+ F++IW K+Q+ Sbjct: 1192 VQVPFTEATLFTPMKCFERAAEKCHSDSLDSGVSSCSWGKHVALGTGSSFQIIW-DKKQM 1250 Query: 1612 PCNEDVGKDVYDLLAWVR-EPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKP 1788 ++D+GK +YD L VR +++ GACL D++D L++ ++ + LSP+ + P Sbjct: 1251 ANDKDIGKGLYDFLVMVRTSGDQREANGACL-EDVDD-LEEENDEALCLSPQFDDGFTNP 1308 Query: 1789 TFED 1800 TFE+ Sbjct: 1309 TFEE 1312 >gb|AQK60584.1| DNA-directed RNA polymerase V subunit 1, partial [Zea mays] Length = 1436 Score = 709 bits (1829), Expect = 0.0 Identities = 348/601 (57%), Positives = 451/601 (75%), Gaps = 1/601 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QL+ GKLYS+ LV+D +++FV+K+ D+ EAYGLV+SS HGL P+E +H+IS Sbjct: 710 QLYREGKLYSRRLVEDCFTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAIST 769 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 RE +IRSSRGL+EPG LFKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y D+ +S+SV Sbjct: 770 REAMIRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSV 829 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 P GEPVGVLAATAIS PAYKAVLDSS S N+SWE MKEIL + +Y+ND+ DR+VVL+L Sbjct: 830 VPPGEPVGVLAATAISNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFL 889 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C C KKFC+E AALAVQ+CL+ V L CA D+ IE+QKQI L +S A LVGHIHL Sbjct: 890 NDCSCAKKFCKERAALAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHL 949 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D L+ +N +T IL KCQEV+ +KKGHL +IF++ ++ +C +Q P DG L + Sbjct: 950 DKGHLERINISTQDILQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHK 1009 Query: 901 FPCLQFSYFAGAV-DETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWV 1077 PC+QF++ V E++E ++++ +++C +LLDTI+KGDPR+ A +IW DA SWV Sbjct: 1010 VPCVQFAFSDDIVLSESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWV 1069 Query: 1078 SSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELF 1257 + KGE ALE++V+K A GDAWR +DACLPV++LIDT RSIPYGIQQ++EL Sbjct: 1070 KHTRKVSKGESALEIIVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELI 1129 Query: 1258 GISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQ 1437 GISCAFDQ VQRLS ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQ Sbjct: 1130 GISCAFDQVVQRLSTTVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQ 1189 Query: 1438 VPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPC 1617 VPFTE+TL TPMKCFE+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W + Q+ Sbjct: 1190 VPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKS 1248 Query: 1618 NEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFE 1797 N++ G +YD LA VR QEK D++ +++ DDM LSPEP+ KPTFE Sbjct: 1249 NKEYGDGLYDFLALVRTDQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE 1306 Query: 1798 D 1800 D Sbjct: 1307 D 1307 >gb|AQK60579.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] Length = 1465 Score = 709 bits (1829), Expect = 0.0 Identities = 348/601 (57%), Positives = 451/601 (75%), Gaps = 1/601 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QL+ GKLYS+ LV+D +++FV+K+ D+ EAYGLV+SS HGL P+E +H+IS Sbjct: 710 QLYREGKLYSRRLVEDCFTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAIST 769 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 RE +IRSSRGL+EPG LFKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y D+ +S+SV Sbjct: 770 REAMIRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSV 829 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 P GEPVGVLAATAIS PAYKAVLDSS S N+SWE MKEIL + +Y+ND+ DR+VVL+L Sbjct: 830 VPPGEPVGVLAATAISNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFL 889 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C C KKFC+E AALAVQ+CL+ V L CA D+ IE+QKQI L +S A LVGHIHL Sbjct: 890 NDCSCAKKFCKERAALAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHL 949 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D L+ +N +T IL KCQEV+ +KKGHL +IF++ ++ +C +Q P DG L + Sbjct: 950 DKGHLERINISTQDILQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHK 1009 Query: 901 FPCLQFSYFAGAV-DETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWV 1077 PC+QF++ V E++E ++++ +++C +LLDTI+KGDPR+ A +IW DA SWV Sbjct: 1010 VPCVQFAFSDDIVLSESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWV 1069 Query: 1078 SSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELF 1257 + KGE ALE++V+K A GDAWR +DACLPV++LIDT RSIPYGIQQ++EL Sbjct: 1070 KHTRKVSKGESALEIIVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELI 1129 Query: 1258 GISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQ 1437 GISCAFDQ VQRLS ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQ Sbjct: 1130 GISCAFDQVVQRLSTTVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQ 1189 Query: 1438 VPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPC 1617 VPFTE+TL TPMKCFE+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W + Q+ Sbjct: 1190 VPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKS 1248 Query: 1618 NEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFE 1797 N++ G +YD LA VR QEK D++ +++ DDM LSPEP+ KPTFE Sbjct: 1249 NKEYGDGLYDFLALVRTDQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE 1306 Query: 1798 D 1800 D Sbjct: 1307 D 1307 >ref|XP_004951807.1| DNA-directed RNA polymerase V subunit 1 [Setaria italica] Length = 2038 Score = 721 bits (1860), Expect = 0.0 Identities = 354/602 (58%), Positives = 454/602 (75%), Gaps = 2/602 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QL+ GKLYS LV+D +S+FV+K+S D+ EAYGLV+SS HGL P+E VHSIS Sbjct: 710 QLYHEGKLYSSRLVEDCFSNFVNKHSDIGDEHPPEAYGLVQSSYFHGLNPYEELVHSIST 769 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 RE I+RSSRGLTEPG LFKNLMAILRDVV+CYDGTVRN CSNSIIQ +Y+ D+ + S Sbjct: 770 REAIVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQLKYKEDDETDFPSA 829 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 P GEPVGVLAATAISTPAY+AVLDSS S N+SWE MKEIL K Y+ND+ DR+V+L+L Sbjct: 830 LPPGEPVGVLAATAISTPAYRAVLDSSQSNNASWESMKEILQTKVGYKNDMKDRKVILFL 889 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C C KKFC+E AAL VQ+CLR V L CA D+SIE+QKQI L +S A LVGHIHL Sbjct: 890 NDCSCPKKFCKERAALTVQSCLRRVTLADCATDISIEHQKQINLDETSEAAPTLVGHIHL 949 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D +L+ +N +T IL KC+E++ + +KKGHL ++F++ S+ +C +Q DG L Sbjct: 950 DKAQLERINISTQDILQKCEEISGRYGKKKGHLCHLFKKITFSTCDCSFAQNTIDGYLHV 1009 Query: 901 FPCLQFSYFAG--AVDETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSW 1074 PC+QFS+ + E++E ++++ +++C +LLDTI+KGDPR+ + IIW +ATSW Sbjct: 1010 APCVQFSFSDDNTILSESVERAVNVIADSVCSVLLDTIIKGDPRIQSAKIIWVESEATSW 1069 Query: 1075 VSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKEL 1254 V + TLKGE LE++V+K A + G AWR V+DAC+PV++LIDT RSIPYGIQQ+KEL Sbjct: 1070 VKNTQNTLKGEPTLEIIVEKDEAVRNGYAWRTVMDACIPVLNLIDTRRSIPYGIQQVKEL 1129 Query: 1255 FGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKV 1434 GISCAFDQ VQRLS ++MV+KGV+K+HL+LV N+MTCTGNLIGFNTSG+KA FRSLKV Sbjct: 1130 LGISCAFDQVVQRLSTTVKMVAKGVLKDHLILVANSMTCTGNLIGFNTSGYKATFRSLKV 1189 Query: 1435 QVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVP 1614 QVPFTE+TL TPMKCFE+AAEKC +D+LG VVSS SWGKH A+GTG+ F+++W + Q+ Sbjct: 1190 QVPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSCSWGKHAAIGTGSSFQILWNE-NQLK 1248 Query: 1615 CNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTF 1794 N++ G +YD LA VR QEK G D++ +++ DD+ LSPEP+ H KPTF Sbjct: 1249 SNKEYGDGLYDFLALVRTDQEK--AGYAFLDDVDYLVEENAVDDVCLSPEPDGTHGKPTF 1306 Query: 1795 ED 1800 ED Sbjct: 1307 ED 1308 >gb|AQK60587.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] Length = 1615 Score = 709 bits (1829), Expect = 0.0 Identities = 348/601 (57%), Positives = 451/601 (75%), Gaps = 1/601 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QL+ GKLYS+ LV+D +++FV+K+ D+ EAYGLV+SS HGL P+E +H+IS Sbjct: 393 QLYREGKLYSRRLVEDCFTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAIST 452 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 RE +IRSSRGL+EPG LFKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y D+ +S+SV Sbjct: 453 REAMIRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSV 512 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 P GEPVGVLAATAIS PAYKAVLDSS S N+SWE MKEIL + +Y+ND+ DR+VVL+L Sbjct: 513 VPPGEPVGVLAATAISNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFL 572 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C C KKFC+E AALAVQ+CL+ V L CA D+ IE+QKQI L +S A LVGHIHL Sbjct: 573 NDCSCAKKFCKERAALAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHL 632 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D L+ +N +T IL KCQEV+ +KKGHL +IF++ ++ +C +Q P DG L + Sbjct: 633 DKGHLERINISTQDILQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHK 692 Query: 901 FPCLQFSYFAGAV-DETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWV 1077 PC+QF++ V E++E ++++ +++C +LLDTI+KGDPR+ A +IW DA SWV Sbjct: 693 VPCVQFAFSDDIVLSESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWV 752 Query: 1078 SSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELF 1257 + KGE ALE++V+K A GDAWR +DACLPV++LIDT RSIPYGIQQ++EL Sbjct: 753 KHTRKVSKGESALEIIVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELI 812 Query: 1258 GISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQ 1437 GISCAFDQ VQRLS ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQ Sbjct: 813 GISCAFDQVVQRLSTTVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQ 872 Query: 1438 VPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPC 1617 VPFTE+TL TPMKCFE+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W + Q+ Sbjct: 873 VPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKS 931 Query: 1618 NEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFE 1797 N++ G +YD LA VR QEK D++ +++ DDM LSPEP+ KPTFE Sbjct: 932 NKEYGDGLYDFLALVRTDQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE 989 Query: 1798 D 1800 D Sbjct: 990 D 990 >gb|PKU59438.1| DNA-directed RNA polymerase E subunit 1 [Dendrobium catenatum] Length = 1205 Score = 696 bits (1795), Expect = 0.0 Identities = 362/604 (59%), Positives = 446/604 (73%), Gaps = 4/604 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 +LF+RGKLYSK LV D++S+++ K+S+ SEA GLVKSS GL P+E VHSIS Sbjct: 73 ELFERGKLYSKTLVQDVFSYYLGKHSVDGVGVPSEACGLVKSSFFGGLNPYEDLVHSIST 132 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 REV++RSSRGLTEPG LFKNLMAILRD VVCYDGTVRNVC NS+IQF+Y + +G+ + + Sbjct: 133 REVVVRSSRGLTEPGTLFKNLMAILRDAVVCYDGTVRNVCRNSVIQFQYRVKDGIGALTD 192 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 + AGEPVGVLAATAIS PAYKAVLDSS STNSSWE MKEILL K YQN DRRVVLYL Sbjct: 193 NLAGEPVGVLAATAISNPAYKAVLDSSLSTNSSWELMKEILLSKVGYQNVFNDRRVVLYL 252 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C CGKKFC+E AA AVQ+CL+ L+ CA + SIEY+K + +S SGLVGHIHL Sbjct: 253 NDCLCGKKFCKEMAAFAVQDCLKKFTLRDCASEFSIEYKKNMVACDSLEAVSGLVGHIHL 312 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D LK N+ T+ IL KCQE+ +KKG LS +F+ L++SECC Q +D NLS Sbjct: 313 DRGMLKAWNKRTEEILLKCQEILSSRQKKKGPLSFLFKGIVLTTSECC--QHSDDANLSS 370 Query: 901 FPCLQFSYF--AGAV-DETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATS 1071 PCLQF YF G + DE+L+ +HIM N ICP+LL+T++KGD RVD NIIW P TS Sbjct: 371 VPCLQFYYFDRGGKISDESLDRVIHIMANVICPMLLETVIKGDSRVDLANIIWIEPTTTS 430 Query: 1072 WVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKE 1251 V R +KGELA+EVV++K AR+ GDAWR VLDACLPVMHLID RSIPYGI+Q++ Sbjct: 431 SVRD-RRPMKGELAIEVVIEKSFARQSGDAWRTVLDACLPVMHLIDMRRSIPYGIKQVEH 489 Query: 1252 LFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLK 1431 L GISC+F+QSV RLS I+MV+KGV+KEHL+LV N+MTCTGN +GFN SGFK L RSLK Sbjct: 490 LLGISCSFEQSVLRLSASIKMVAKGVLKEHLILVANSMTCTGNFLGFNNSGFKKLLRSLK 549 Query: 1432 VQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQV 1611 +Q+PFTEATL TP+KCFERAA+KCHTD L S+VSS WGKHVA+GTG+ F+V W +QQV Sbjct: 550 IQMPFTEATLFTPIKCFERAAQKCHTDTLTSIVSSCLWGKHVAVGTGSCFKVFW-DRQQV 608 Query: 1612 PCNEDVGKDVYDLLAWVR-EPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKP 1788 N+DV KDVY+ L V+ E+++ D++D + + + + SP P K Sbjct: 609 KANKDVEKDVYEFLELVQTATTEREV-------DVDDLMYESEY-EFCASPVPGIRIGKE 660 Query: 1789 TFED 1800 T +D Sbjct: 661 TCDD 664 >gb|AQK60574.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] Length = 1663 Score = 709 bits (1829), Expect = 0.0 Identities = 348/601 (57%), Positives = 451/601 (75%), Gaps = 1/601 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QL+ GKLYS+ LV+D +++FV+K+ D+ EAYGLV+SS HGL P+E +H+IS Sbjct: 710 QLYREGKLYSRRLVEDCFTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAIST 769 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 RE +IRSSRGL+EPG LFKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y D+ +S+SV Sbjct: 770 REAMIRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSV 829 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 P GEPVGVLAATAIS PAYKAVLDSS S N+SWE MKEIL + +Y+ND+ DR+VVL+L Sbjct: 830 VPPGEPVGVLAATAISNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFL 889 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C C KKFC+E AALAVQ+CL+ V L CA D+ IE+QKQI L +S A LVGHIHL Sbjct: 890 NDCSCAKKFCKERAALAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHL 949 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D L+ +N +T IL KCQEV+ +KKGHL +IF++ ++ +C +Q P DG L + Sbjct: 950 DKGHLERINISTQDILQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHK 1009 Query: 901 FPCLQFSYFAGAV-DETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWV 1077 PC+QF++ V E++E ++++ +++C +LLDTI+KGDPR+ A +IW DA SWV Sbjct: 1010 VPCVQFAFSDDIVLSESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWV 1069 Query: 1078 SSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELF 1257 + KGE ALE++V+K A GDAWR +DACLPV++LIDT RSIPYGIQQ++EL Sbjct: 1070 KHTRKVSKGESALEIIVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELI 1129 Query: 1258 GISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQ 1437 GISCAFDQ VQRLS ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQ Sbjct: 1130 GISCAFDQVVQRLSTTVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQ 1189 Query: 1438 VPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPC 1617 VPFTE+TL TPMKCFE+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W + Q+ Sbjct: 1190 VPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKS 1248 Query: 1618 NEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFE 1797 N++ G +YD LA VR QEK D++ +++ DDM LSPEP+ KPTFE Sbjct: 1249 NKEYGDGLYDFLALVRTDQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE 1306 Query: 1798 D 1800 D Sbjct: 1307 D 1307 >gb|AQK60567.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] Length = 1719 Score = 709 bits (1829), Expect = 0.0 Identities = 348/601 (57%), Positives = 451/601 (75%), Gaps = 1/601 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QL+ GKLYS+ LV+D +++FV+K+ D+ EAYGLV+SS HGL P+E +H+IS Sbjct: 497 QLYREGKLYSRRLVEDCFTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAIST 556 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 RE +IRSSRGL+EPG LFKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y D+ +S+SV Sbjct: 557 REAMIRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSV 616 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 P GEPVGVLAATAIS PAYKAVLDSS S N+SWE MKEIL + +Y+ND+ DR+VVL+L Sbjct: 617 VPPGEPVGVLAATAISNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFL 676 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C C KKFC+E AALAVQ+CL+ V L CA D+ IE+QKQI L +S A LVGHIHL Sbjct: 677 NDCSCAKKFCKERAALAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHL 736 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D L+ +N +T IL KCQEV+ +KKGHL +IF++ ++ +C +Q P DG L + Sbjct: 737 DKGHLERINISTQDILQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHK 796 Query: 901 FPCLQFSYFAGAV-DETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWV 1077 PC+QF++ V E++E ++++ +++C +LLDTI+KGDPR+ A +IW DA SWV Sbjct: 797 VPCVQFAFSDDIVLSESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWV 856 Query: 1078 SSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELF 1257 + KGE ALE++V+K A GDAWR +DACLPV++LIDT RSIPYGIQQ++EL Sbjct: 857 KHTRKVSKGESALEIIVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELI 916 Query: 1258 GISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQ 1437 GISCAFDQ VQRLS ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQ Sbjct: 917 GISCAFDQVVQRLSTTVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQ 976 Query: 1438 VPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPC 1617 VPFTE+TL TPMKCFE+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W + Q+ Sbjct: 977 VPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKS 1035 Query: 1618 NEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFE 1797 N++ G +YD LA VR QEK D++ +++ DDM LSPEP+ KPTFE Sbjct: 1036 NKEYGDGLYDFLALVRTDQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE 1093 Query: 1798 D 1800 D Sbjct: 1094 D 1094 >gb|AQK60573.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] gb|AQK60577.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] gb|AQK60582.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] Length = 1776 Score = 709 bits (1829), Expect = 0.0 Identities = 348/601 (57%), Positives = 451/601 (75%), Gaps = 1/601 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QL+ GKLYS+ LV+D +++FV+K+ D+ EAYGLV+SS HGL P+E +H+IS Sbjct: 554 QLYREGKLYSRRLVEDCFTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAIST 613 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 RE +IRSSRGL+EPG LFKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y D+ +S+SV Sbjct: 614 REAMIRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSV 673 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 P GEPVGVLAATAIS PAYKAVLDSS S N+SWE MKEIL + +Y+ND+ DR+VVL+L Sbjct: 674 VPPGEPVGVLAATAISNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFL 733 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C C KKFC+E AALAVQ+CL+ V L CA D+ IE+QKQI L +S A LVGHIHL Sbjct: 734 NDCSCAKKFCKERAALAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHL 793 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D L+ +N +T IL KCQEV+ +KKGHL +IF++ ++ +C +Q P DG L + Sbjct: 794 DKGHLERINISTQDILQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHK 853 Query: 901 FPCLQFSYFAGAV-DETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWV 1077 PC+QF++ V E++E ++++ +++C +LLDTI+KGDPR+ A +IW DA SWV Sbjct: 854 VPCVQFAFSDDIVLSESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWV 913 Query: 1078 SSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELF 1257 + KGE ALE++V+K A GDAWR +DACLPV++LIDT RSIPYGIQQ++EL Sbjct: 914 KHTRKVSKGESALEIIVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELI 973 Query: 1258 GISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQ 1437 GISCAFDQ VQRLS ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQ Sbjct: 974 GISCAFDQVVQRLSTTVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQ 1033 Query: 1438 VPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPC 1617 VPFTE+TL TPMKCFE+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W + Q+ Sbjct: 1034 VPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKS 1092 Query: 1618 NEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFE 1797 N++ G +YD LA VR QEK D++ +++ DDM LSPEP+ KPTFE Sbjct: 1093 NKEYGDGLYDFLALVRTDQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE 1150 Query: 1798 D 1800 D Sbjct: 1151 D 1151 >ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera] ref|XP_010246064.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera] ref|XP_010246066.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera] Length = 1908 Score = 710 bits (1832), Expect = 0.0 Identities = 355/600 (59%), Positives = 437/600 (72%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 Q DRGKLYS+ LV+ L S F SKY + D S E++GL+ S +GL P+E VHSIS+ Sbjct: 711 QFSDRGKLYSRTLVEALTSFFRSKYCVNRDGESPESFGLISSCFFNGLNPYEELVHSISS 770 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 REV++RSSRGLTEPG LFKNLMAILRDVV+CYDGTVRNVC+NS+IQFEY D G S Sbjct: 771 REVLVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCNNSLIQFEYGADLGNTPPSF 830 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 PAGEPVG+LAATAIS PAYKAVLDSS S NSSWE MKEILLC+A+++NDLIDRRV+LYL Sbjct: 831 YPAGEPVGILAATAISNPAYKAVLDSSPSNNSSWELMKEILLCRASFKNDLIDRRVILYL 890 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C CG +C+E AA VQN L+ V L A+D SI+YQKQ P +S T +GLVGHIHL Sbjct: 891 NDCGCGGYYCKEKAAYIVQNHLKRVSLMDIAVDFSIKYQKQCIFPGNSVTNAGLVGHIHL 950 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D M LK LN++ IL CQE +KK L +I RR L SECC + P D SE Sbjct: 951 DKMSLKALNRSMADILKDCQETLNSFRKKKDQLGHILRRVLLLVSECCSVRLP-DKERSE 1009 Query: 901 FPCLQFSYFAGAVDETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVS 1080 FPCLQF + ++++ IM N +CPILL T +KGDP+V + NI+WT PD SWV Sbjct: 1010 FPCLQF-LWEDTSSDSIQRISKIMANKVCPILLGTNIKGDPQVLSANIMWTSPDVCSWVR 1068 Query: 1081 SPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFG 1260 +P + GEL LEVVV K A ++ GDAWR+VL++CLPV+HL+DT RSIPYGI+QI+EL G Sbjct: 1069 NPCKIQNGELVLEVVVDKAAVKRTGDAWRVVLNSCLPVIHLVDTRRSIPYGIKQIQELLG 1128 Query: 1261 ISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQV 1440 ISCAFDQ+VQRLS +RMV+KGV+KEHL+L N+MTCTGN+IGFN+ G+KAL RSL V V Sbjct: 1129 ISCAFDQAVQRLSSSVRMVTKGVLKEHLILAANSMTCTGNMIGFNSGGYKALLRSLNVHV 1188 Query: 1441 PFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCN 1620 PFTEATL TP KCFE+AA+KCH D+L S+V+S SWGKHV +GTG FE++W K ++ N Sbjct: 1189 PFTEATLFTPRKCFEKAAQKCHMDSLSSIVASCSWGKHVTVGTGAQFEILWNNK-EMGVN 1247 Query: 1621 EDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFED 1800 +D DVYD L VR E D CLG +I+D + + ++ LSP N+ KP F+D Sbjct: 1248 QDGEIDVYDFLQLVRGSNEGDSFTTCLGQEIDDLELENEERELSLSPNVNTCFNKPVFDD 1307 >gb|AQK60589.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] Length = 1877 Score = 709 bits (1829), Expect = 0.0 Identities = 348/601 (57%), Positives = 451/601 (75%), Gaps = 1/601 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QL+ GKLYS+ LV+D +++FV+K+ D+ EAYGLV+SS HGL P+E +H+IS Sbjct: 710 QLYREGKLYSRRLVEDCFTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAIST 769 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 RE +IRSSRGL+EPG LFKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y D+ +S+SV Sbjct: 770 REAMIRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSV 829 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 P GEPVGVLAATAIS PAYKAVLDSS S N+SWE MKEIL + +Y+ND+ DR+VVL+L Sbjct: 830 VPPGEPVGVLAATAISNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFL 889 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C C KKFC+E AALAVQ+CL+ V L CA D+ IE+QKQI L +S A LVGHIHL Sbjct: 890 NDCSCAKKFCKERAALAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHL 949 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D L+ +N +T IL KCQEV+ +KKGHL +IF++ ++ +C +Q P DG L + Sbjct: 950 DKGHLERINISTQDILQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHK 1009 Query: 901 FPCLQFSYFAGAV-DETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWV 1077 PC+QF++ V E++E ++++ +++C +LLDTI+KGDPR+ A +IW DA SWV Sbjct: 1010 VPCVQFAFSDDIVLSESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWV 1069 Query: 1078 SSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELF 1257 + KGE ALE++V+K A GDAWR +DACLPV++LIDT RSIPYGIQQ++EL Sbjct: 1070 KHTRKVSKGESALEIIVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELI 1129 Query: 1258 GISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQ 1437 GISCAFDQ VQRLS ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQ Sbjct: 1130 GISCAFDQVVQRLSTTVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQ 1189 Query: 1438 VPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPC 1617 VPFTE+TL TPMKCFE+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W + Q+ Sbjct: 1190 VPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKS 1248 Query: 1618 NEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFE 1797 N++ G +YD LA VR QEK D++ +++ DDM LSPEP+ KPTFE Sbjct: 1249 NKEYGDGLYDFLALVRTDQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE 1306 Query: 1798 D 1800 D Sbjct: 1307 D 1307 >gb|AQK60576.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] Length = 1906 Score = 709 bits (1829), Expect = 0.0 Identities = 348/601 (57%), Positives = 451/601 (75%), Gaps = 1/601 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QL+ GKLYS+ LV+D +++FV+K+ D+ EAYGLV+SS HGL P+E +H+IS Sbjct: 710 QLYREGKLYSRRLVEDCFTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAIST 769 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 RE +IRSSRGL+EPG LFKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y D+ +S+SV Sbjct: 770 REAMIRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSV 829 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 P GEPVGVLAATAIS PAYKAVLDSS S N+SWE MKEIL + +Y+ND+ DR+VVL+L Sbjct: 830 VPPGEPVGVLAATAISNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFL 889 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C C KKFC+E AALAVQ+CL+ V L CA D+ IE+QKQI L +S A LVGHIHL Sbjct: 890 NDCSCAKKFCKERAALAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHL 949 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D L+ +N +T IL KCQEV+ +KKGHL +IF++ ++ +C +Q P DG L + Sbjct: 950 DKGHLERINISTQDILQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHK 1009 Query: 901 FPCLQFSYFAGAV-DETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWV 1077 PC+QF++ V E++E ++++ +++C +LLDTI+KGDPR+ A +IW DA SWV Sbjct: 1010 VPCVQFAFSDDIVLSESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWV 1069 Query: 1078 SSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELF 1257 + KGE ALE++V+K A GDAWR +DACLPV++LIDT RSIPYGIQQ++EL Sbjct: 1070 KHTRKVSKGESALEIIVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELI 1129 Query: 1258 GISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQ 1437 GISCAFDQ VQRLS ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQ Sbjct: 1130 GISCAFDQVVQRLSTTVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQ 1189 Query: 1438 VPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPC 1617 VPFTE+TL TPMKCFE+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W + Q+ Sbjct: 1190 VPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKS 1248 Query: 1618 NEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFE 1797 N++ G +YD LA VR QEK D++ +++ DDM LSPEP+ KPTFE Sbjct: 1249 NKEYGDGLYDFLALVRTDQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE 1306 Query: 1798 D 1800 D Sbjct: 1307 D 1307 >gb|KQL28710.1| hypothetical protein SETIT_016066mg [Setaria italica] Length = 2050 Score = 712 bits (1837), Expect = 0.0 Identities = 354/614 (57%), Positives = 454/614 (73%), Gaps = 14/614 (2%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QL+ GKLYS LV+D +S+FV+K+S D+ EAYGLV+SS HGL P+E VHSIS Sbjct: 710 QLYHEGKLYSSRLVEDCFSNFVNKHSDIGDEHPPEAYGLVQSSYFHGLNPYEELVHSIST 769 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 RE I+RSSRGLTEPG LFKNLMAILRDVV+CYDGTVRN CSNSIIQ +Y+ D+ + S Sbjct: 770 REAIVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQLKYKEDDETDFPSA 829 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 P GEPVGVLAATAISTPAY+AVLDSS S N+SWE MKEIL K Y+ND+ DR+V+L+L Sbjct: 830 LPPGEPVGVLAATAISTPAYRAVLDSSQSNNASWESMKEILQTKVGYKNDMKDRKVILFL 889 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIE------------YQKQIGLPNSS 684 N+C C KKFC+E AAL VQ+CLR V L CA D+SIE +QKQI L +S Sbjct: 890 NDCSCPKKFCKERAALTVQSCLRRVTLADCATDISIEGERQKYVVCIFRHQKQINLDETS 949 Query: 685 GTASGLVGHIHLDMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECC 864 A LVGHIHLD +L+ +N +T IL KC+E++ + +KKGHL ++F++ S+ +C Sbjct: 950 EAAPTLVGHIHLDKAQLERINISTQDILQKCEEISGRYGKKKGHLCHLFKKITFSTCDCS 1009 Query: 865 GSQQPNDGNLSEFPCLQFSYFAG--AVDETLEHGMHIMINTICPILLDTIVKGDPRVDAV 1038 +Q DG L PC+QFS+ + E++E ++++ +++C +LLDTI+KGDPR+ + Sbjct: 1010 FAQNTIDGYLHVAPCVQFSFSDDNTILSESVERAVNVIADSVCSVLLDTIIKGDPRIQSA 1069 Query: 1039 NIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTR 1218 IIW +ATSWV + TLKGE LE++V+K A + G AWR V+DAC+PV++LIDT R Sbjct: 1070 KIIWVESEATSWVKNTQNTLKGEPTLEIIVEKDEAVRNGYAWRTVMDACIPVLNLIDTRR 1129 Query: 1219 SIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNT 1398 SIPYGIQQ+KEL GISCAFDQ VQRLS ++MV+KGV+K+HL+LV N+MTCTGNLIGFNT Sbjct: 1130 SIPYGIQQVKELLGISCAFDQVVQRLSTTVKMVAKGVLKDHLILVANSMTCTGNLIGFNT 1189 Query: 1399 SGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTH 1578 SG+KA FRSLKVQVPFTE+TL TPMKCFE+AAEKC +D+LG VVSS SWGKH A+GTG+ Sbjct: 1190 SGYKATFRSLKVQVPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSCSWGKHAAIGTGSS 1249 Query: 1579 FEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLS 1758 F+++W + Q+ N++ G +YD LA VR QEK G D++ +++ DD+ LS Sbjct: 1250 FQILWNE-NQLKSNKEYGDGLYDFLALVRTDQEK--AGYAFLDDVDYLVEENAVDDVCLS 1306 Query: 1759 PEPNSAHEKPTFED 1800 PEP+ H KPTFED Sbjct: 1307 PEPDGTHGKPTFED 1320 >gb|AQK60578.1| DNA-directed RNA polymerase V subunit 1 [Zea mays] Length = 1916 Score = 709 bits (1829), Expect = 0.0 Identities = 348/601 (57%), Positives = 451/601 (75%), Gaps = 1/601 (0%) Frame = +1 Query: 1 QLFDRGKLYSKALVDDLYSHFVSKYSIREDKPSSEAYGLVKSSLVHGLKPFETFVHSISA 180 QL+ GKLYS+ LV+D +++FV+K+ D+ EAYGLV+SS HGL P+E +H+IS Sbjct: 694 QLYREGKLYSRRLVEDCFTNFVNKHLAIGDEYPPEAYGLVQSSYFHGLNPYEELIHAIST 753 Query: 181 REVIIRSSRGLTEPGILFKNLMAILRDVVVCYDGTVRNVCSNSIIQFEYELDEGVESASV 360 RE +IRSSRGL+EPG LFKNLMAILRDVV+CYDGTVRN+CSNSIIQ +Y D+ +S+SV Sbjct: 754 REAMIRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQLKYGEDDETDSSSV 813 Query: 361 SPAGEPVGVLAATAISTPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYL 540 P GEPVGVLAATAIS PAYKAVLDSS S N+SWE MKEIL + +Y+ND+ DR+VVL+L Sbjct: 814 VPPGEPVGVLAATAISNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFL 873 Query: 541 NNCCCGKKFCRENAALAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHL 720 N+C C KKFC+E AALAVQ+CL+ V L CA D+ IE+QKQI L +S A LVGHIHL Sbjct: 874 NDCSCAKKFCKERAALAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHL 933 Query: 721 DMMRLKILNQTTDGILHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSE 900 D L+ +N +T IL KCQEV+ +KKGHL +IF++ ++ +C +Q P DG L + Sbjct: 934 DKGHLERINISTQDILQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHK 993 Query: 901 FPCLQFSYFAGAV-DETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWV 1077 PC+QF++ V E++E ++++ +++C +LLDTI+KGDPR+ A +IW DA SWV Sbjct: 994 VPCVQFAFSDDIVLSESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWV 1053 Query: 1078 SSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELF 1257 + KGE ALE++V+K A GDAWR +DACLPV++LIDT RSIPYGIQQ++EL Sbjct: 1054 KHTRKVSKGESALEIIVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELI 1113 Query: 1258 GISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQ 1437 GISCAFDQ VQRLS ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQ Sbjct: 1114 GISCAFDQVVQRLSTTVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQ 1173 Query: 1438 VPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPC 1617 VPFTE+TL TPMKCFE+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W + Q+ Sbjct: 1174 VPFTESTLFTPMKCFEKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKS 1232 Query: 1618 NEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQNDDMPLSPEPNSAHEKPTFE 1797 N++ G +YD LA VR QEK D++ +++ DDM LSPEP+ KPTFE Sbjct: 1233 NKEYGDGLYDFLALVRTDQEK--TDYMFLDDVDYLVEENAADDMCLSPEPDGTLGKPTFE 1290 Query: 1798 D 1800 D Sbjct: 1291 D 1291