BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00004078
         (5251 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_024035579.1| uncharacterized protein LOC112096381 [Citrus...  1099   0.0  
gb|PRQ46594.1| putative nucleotidyltransferase, Ribonuclease H [...  1092   0.0  
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]                1083   0.0  
gb|AIG55302.1| gag-pol, partial [Camellia sinensis]                  1079   0.0  
gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobrom...  1070   0.0  
ref|XP_017216862.1| PREDICTED: uncharacterized protein LOC108194...  1069   0.0  
gb|AEV42258.1| hypothetical protein [Beta vulgaris]                  1063   0.0  
gb|OMO65975.1| reverse transcriptase [Corchorus capsularis]          1056   0.0  
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana...  1052   0.0  
gb|ABM55240.1| retrotransposon protein [Beta vulgaris]               1048   0.0  
emb|CAA73042.1| polyprotein, partial [Ananas comosus]                1047   0.0  
gb|PNY00884.1| retrotransposon-related protein, partial [Trifoli...  1045   0.0  
ref|XP_019106882.1| PREDICTED: uncharacterized protein LOC109135...  1042   0.0  
gb|PRQ45918.1| putative nucleotidyltransferase, Ribonuclease H [...  1039   0.0  
gb|PKU71866.1| RNA-directed DNA polymerase [Dendrobium catenatum]    1036   0.0  
gb|PKU79799.1| RNA-directed DNA polymerase [Dendrobium catenatum]    1036   0.0  
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e...  1035   0.0  
ref|XP_015078360.1| PREDICTED: uncharacterized protein LOC107022...  1034   0.0  
gb|OTG36861.1| putative reverse transcriptase domain-containing ...  1034   0.0  
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...  1033   0.0  

>ref|XP_024035579.1| uncharacterized protein LOC112096381 [Citrus clementina]
          Length = 1747

 Score = 1099 bits (2843), Expect = 0.0
 Identities = 527/857 (61%), Positives = 664/857 (77%), Gaps = 5/857 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQL+GA VFSK+DLRSGYHQ+++++ D+ KTAFRTRYGHYEFLVMPFG+TNAPA FMDLM
Sbjct: 202  DQLRGAAVFSKIDLRSGYHQLKIRSEDVSKTAFRTRYGHYEFLVMPFGLTNAPAVFMDLM 261

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            NR F P+LD+FVIVFIDDIL+YS + ++HE HLRIVL+TLRE +LY K  KCEF+L ++ 
Sbjct: 262  NRIFQPYLDQFVIVFIDDILIYSKSKKEHETHLRIVLETLREKKLYGKFKKCEFWLDRVM 321

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGH+++  GI+ D  KVE + +W  P SV EVRSFLGLAGYYRRFVK FS IA  +T L
Sbjct: 322  FLGHIVTKDGISADPAKVEVIVNWERPASVTEVRSFLGLAGYYRRFVKGFSSIAAPLTNL 381

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
            T+KN  F W EAC+ +F ELK  LVTAPVLT+  + GGF I+SDAS KGLGCVL Q G+V
Sbjct: 382  TKKNVKFNWDEACEKSFQELKSHLVTAPVLTLLSEGGGFVIYSDASRKGLGCVLMQHGKV 441

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            +AYASRQLK HE+NYPTHDLELAA++FALK+WRHYL G+  EIFT+HKSLKY+FTQKE+N
Sbjct: 442  IAYASRQLKNHEQNYPTHDLELAAIVFALKIWRHYLYGDTCEIFTNHKSLKYLFTQKELN 501

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKPT---AMFLTTQRELLDEMRRMDLEV 3575
            +RQRRWLEL+ DFD  + YHPG+ N+  DALSRK +   A  +T Q  ++ ++RR  +EV
Sbjct: 502  LRQRRWLELVKDFDCSINYHPGKANVVADALSRKSSGCMAHLITMQSHVVKDLRRCGIEV 561

Query: 3576 VIPGQACCMP-MQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTR 3752
            V  GQA  +  + ++ ++++++K +Q  D +L ++RE    G +    +     L  G R
Sbjct: 562  VTHGQADVLAHLTVQPTLIDRVKVAQKNDIELNKIREDVSKGHKPGFRLDNGDGLWLGQR 621

Query: 3753 LCVPRGA-IRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQQ 3929
            LCVP    ++ E++ EAH S YS+HPG TKMYRDL+Q +WW  MKR+IA FVS+CL+CQQ
Sbjct: 622  LCVPADEELKAEILREAHESSYSMHPGSTKMYRDLKQSFWWRNMKRDIAAFVSRCLVCQQ 681

Query: 3930 IKAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPFR 4109
            +K EHQR AG LQ LPIP+WKWE ITMDFV+GLP S RG + IWVIVDRLTKSAHFL  +
Sbjct: 682  VKIEHQRLAGTLQTLPIPQWKWEHITMDFVSGLPCSRRGCDCIWVIVDRLTKSAHFLARK 741

Query: 4110 VGQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQT 4289
               +   LA +++ EIVRLHGVP SIVSDRD  FTS +W SL + LG++L++STAFHP+T
Sbjct: 742  STDNVGQLAKLFIKEIVRLHGVPVSIVSDRDPLFTSRFWASLHKELGTKLRFSTAFHPRT 801

Query: 4290 DGQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCRS 4469
            DGQSERTIQTLEDMLRACVLD  G WE+HL L+EF+YNNSF +SI MAPFEALYGRKCRS
Sbjct: 802  DGQSERTIQTLEDMLRACVLDLSGGWEEHLMLIEFAYNNSFHSSIGMAPFEALYGRKCRS 861

Query: 4470 PVYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVFL 4649
            P+ WD++GERKLL PELI  TV  ++ IR  ++TAQ RQ+ +A+  +R LEFE GD VFL
Sbjct: 862  PICWDEVGERKLLDPELIQITVDKIKLIRGRLQTAQSRQKSYADRRRRELEFEKGDFVFL 921

Query: 4650 KISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLRKYI 4829
            K+SP +GV RFG  GKLSPRFIGPF+I+ER+G VAYR+ALPP+L+ +HNVFHVS LRKYI
Sbjct: 922  KVSPWKGVFRFGKTGKLSPRFIGPFEILERIGPVAYRIALPPSLSRLHNVFHVSVLRKYI 981

Query: 4830 RDESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDSTWERE 5009
             D  HVLD+  ++I  D+S   QP+ I+DR E+V++N+ I LV+V+W   S  ++TWERE
Sbjct: 982  ADPLHVLDYQPIQINEDMSYEEQPIEIVDRDEQVLRNRVIPLVKVRWMNHSIEEATWERE 1041

Query: 5010 DQMREQYPHLFE*LVFS 5060
             +M E+YP LF  L  S
Sbjct: 1042 AEMLEKYPQLFHALGMS 1058



 Score =  139 bits (349), Expect = 6e-29
 Identities = 64/77 (83%), Positives = 70/77 (90%)
 Frame = +1

Query: 2272 PISKAPYRMAPVELAELKKQVQEMLDKGLVRPSTSPWGAPVLLVKKKDGSQRLCIDYREL 2451
            PISKAPYRMAP+EL ELK Q+QE+LDKG +RPS SPWGAPVL VKKKDGS RLCIDYR+L
Sbjct: 124  PISKAPYRMAPIELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRQL 183

Query: 2452 NRVTVRNKYPLPRIDDL 2502
            N VTV+NKYPLPRIDDL
Sbjct: 184  NMVTVKNKYPLPRIDDL 200


>gb|PRQ46594.1| putative nucleotidyltransferase, Ribonuclease H [Rosa chinensis]
          Length = 1571

 Score = 1092 bits (2823), Expect = 0.0
 Identities = 515/851 (60%), Positives = 670/851 (78%), Gaps = 5/851 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQL+GA VFSK+DLRSGYHQ+R+K  D+ KTAFR+RYGHYEFLVMPFG+TNAPA FMDLM
Sbjct: 720  DQLRGAKVFSKIDLRSGYHQLRIKEEDVAKTAFRSRYGHYEFLVMPFGLTNAPAAFMDLM 779

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            NR F P+LD+FVIVFIDDILVYS + E H +HL IVL+TLR HQLYAK SKCEF+L Q++
Sbjct: 780  NRVFRPYLDRFVIVFIDDILVYSKSEELHVKHLNIVLETLRLHQLYAKFSKCEFWLDQVT 839

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGHVI++ G++VD +KVEAV +W  P +V E+RSFLGLAGYYRRFV++FS+IA  +TKL
Sbjct: 840  FLGHVITAGGVSVDPQKVEAVLNWERPTNVTEIRSFLGLAGYYRRFVQNFSRIAAPLTKL 899

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
            TRK   FVW+E C+ +F ELK RL +AP+L++PD  G + I+SDAS +GLGCVL Q G V
Sbjct: 900  TRKGVRFVWSENCERSFQELKSRLTSAPILSLPDDSGEYVIYSDASRQGLGCVLMQHGNV 959

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            +AYASRQLK HE NYPTHDLELAA++ ALKLWRHYL G R +IFTDHKSLKY+FTQ  +N
Sbjct: 960  IAYASRQLKPHELNYPTHDLELAAIVLALKLWRHYLYGARCQIFTDHKSLKYVFTQPNLN 1019

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKPT---AMFLTTQRELLDEMRRMDLEV 3575
            +RQRRW+EL+ D+D  ++YHPG+ N+  DALSR P+   +    T+  LL E+R   +E+
Sbjct: 1020 LRQRRWMELIEDYDCTIEYHPGKANVVADALSRNPSVTLSYLRATRVPLLSELRSTGVEL 1079

Query: 3576 VIPGQACCMP-MQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTR 3752
             +      +    +R + +++I+ +Q  D +++ ++E    G + +  I  DG+L FG R
Sbjct: 1080 SVDEVGTLVASFHVRPAFIDKIREAQPLDPRIEGIKEGVRGGWQLEFSIRRDGTLMFGKR 1139

Query: 3753 LCVPR-GAIRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQQ 3929
            LCVP   A+++E++ EAH+S Y++HPGGTKMYR L+++YWW  MKREIA FVSKCL+CQQ
Sbjct: 1140 LCVPNVEALKREILDEAHNSAYALHPGGTKMYRTLKEYYWWPNMKREIAAFVSKCLVCQQ 1199

Query: 3930 IKAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPFR 4109
            +KAE Q+ +GLLQPLPIPEWKWE +TMDF+  LPR+  G++ IWVIVDRLTKSAHFL  +
Sbjct: 1200 VKAERQKPSGLLQPLPIPEWKWEHLTMDFIYKLPRTQDGNDGIWVIVDRLTKSAHFLAVK 1259

Query: 4110 VGQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQT 4289
               S + LA +Y+ EIV+LHGVPESIVSDRD RFTS +W  + + +G++L++STAFHPQT
Sbjct: 1260 ETFSLDKLAKLYVDEIVKLHGVPESIVSDRDARFTSKFWRKVHKFMGTKLQFSTAFHPQT 1319

Query: 4290 DGQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCRS 4469
            DGQSERTIQTLEDMLRAC L F GSW+ HL L+EF+YNNS+ +S  MAP+EALYG++CR+
Sbjct: 1320 DGQSERTIQTLEDMLRACSLQFKGSWDKHLALMEFAYNNSYHSSTGMAPYEALYGKQCRT 1379

Query: 4470 PVYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVFL 4649
            P+ WD++GER+L+GPE++  T   V+ IR+ +KTAQ RQ+ +A+ H++ LEF+VGD VFL
Sbjct: 1380 PLCWDEVGERQLIGPEIVEITTNKVKVIREKLKTAQSRQKSYADKHRKHLEFQVGDWVFL 1439

Query: 4650 KISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLRKYI 4829
            K+SP +GV+RFG RGKLSPR+IGP++I+ER+G VAYRLALPP L+ VH+VFHVS LRKYI
Sbjct: 1440 KLSPWKGVVRFGKRGKLSPRYIGPYEIVERIGLVAYRLALPPQLSQVHDVFHVSMLRKYI 1499

Query: 4830 RDESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDSTWERE 5009
             D SHVL    + +  DL+   +P+ ILDR E+V+++K I LV+V W      ++TWE E
Sbjct: 1500 TDPSHVLPAQPITLTEDLTYEEEPVQILDRREQVLRSKIIPLVKVLWRNHLFEEATWEPE 1559

Query: 5010 DQMREQYPHLF 5042
            DQMR+QYPHLF
Sbjct: 1560 DQMRQQYPHLF 1570



 Score =  278 bits (712), Expect = 6e-72
 Identities = 224/696 (32%), Positives = 310/696 (44%), Gaps = 63/696 (9%)
 Frame = +1

Query: 604  AQQRQTEIFQEGLLRAQQTATAAMERSTA--PREAKPGNVSDFRRLQPATFAGTETPLDA 777
            A +   E    GLLR   T     ER  A  P       V   RR    TF+   T   A
Sbjct: 57   ASEGDDEHVPRGLLR---TVERLFERFAAALPNPRTDYTVERARRHGAYTFSSAPTESVA 113

Query: 778  DQWLVDMTNLLSAARIPEKDMVEVVKIQLTDIARTWWM-TEEERYDLAEGEFISWEMFSA 954
              W+  M  +  +   P    V +    L   A  WW  T    YD      ++WE F  
Sbjct: 114  GDWITRMERVFESLGCPAARRVPLAIDLLDGDAWLWWQGTRNMGYDPTT---MTWEEFKT 170

Query: 955  AFLVRFFPKSAKKQMEQQFVNLVQGDR-SVDAYAAEFIRLSRFAPKLVMDEEDRADRFQQ 1131
             F  R++ ++++ ++  +F+ L Q +  +V  Y   FI LSRFAP+LV  E+ + D+F  
Sbjct: 171  EFSNRYYNQASQHRLRFEFMQLKQTEEMTVLQYEERFIALSRFAPELVATEKLKVDQFIN 230

Query: 1132 GLRLEIQMQQSSQELETYDQVLTAARKAELLI----------------QKKAASGYHGQQ 1263
            GL    +   +  +  T+   + AA + E                    K+ AS      
Sbjct: 231  GLLPVYRDWLAPHDYPTFKLAVEAAMRCEARYLDGSRPLEIGGPSQGPSKRIASSSGSAS 290

Query: 1264 K---RPYGQMTSVAQ--------PSQRAAQIPR-----STXXXXXXXXXXXXXXCSFCQR 1395
                RP    +S  Q        P Q   +  R     S+              C+ C R
Sbjct: 291  SSGSRPSSSDSSSRQRFRGRFRRPGQTGRRQSRGGTASSSGGFGRQAIPRDYPQCATCGR 350

Query: 1396 TGHLKKDCHRANGACLACGSMDHKIAQCPNGRRHLET-----------GATAPGQIRXXX 1542
              H    C    G C  CG   H   +CP   + + T           GAT+ G      
Sbjct: 351  --HHAGPCQAGVGTCYQCGQWGHYRRECPQLTQGVFTTTSQSMGQTSVGATSSGS----- 403

Query: 1543 XXXXXXXXXXXIQTRPPAGQVQARPAYPPQSVAFXXXXXXXXXXXAAFTLTAEQAEVAGD 1722
                         T+   GQ + RP    +  A                +T ++   A +
Sbjct: 404  ----HGSLSGRSSTQSGRGQ-RGRPVTQARLHA----------------MTQQEGRTAPN 442

Query: 1723 VVTGTISVYSQPAFALFDSGASRCFVSARFVSMHSIPYISLDVFWTISTGNGSVSCGKEC 1902
            V+ G + V+ QPAF L D GAS  F+S RF    ++P   L   W +   +G     +  
Sbjct: 443  VIMGMLVVFGQPAFILIDPGASHSFMSKRFSFFANVPPSLLLGEWHVVLPSGERHRIEWV 502

Query: 1903 -RDCLIVVGDHSFLADLLVIDNCEFDVILGMDWLSGCHAMIDCRRRAVVFRMPGLPEFEF 2079
             R C + V      ADL+  +  EFDVILGMD+L   HA++DC    V+FR PG P   F
Sbjct: 503  PRFCGVFVEGVCLEADLIPFELVEFDVILGMDFLRMHHALVDCFCSTVLFRSPGKPVVTF 562

Query: 2080 IGDVSPHQSDRVS-IRARFMMMEEQQESVTPAL--------------ISEFLDVFPEDLP 2214
             G+     S  +S + A+ M+ +  Q  +   +              + ++ DVFPE+LP
Sbjct: 563  YGEREVLPSCIISALTAKKMLSKGCQAYLAHVVNSNAEVMDLSQIPVVGDYPDVFPEELP 622

Query: 2215 GLPPEREVEFAIEVFSGTGPISKAPYRMAPVELAELKKQVQEMLDKGLVRPSTSPWGAPV 2394
            GLPP RE++F I++  GT PIS+APYRMAP EL EL  Q+QE+ DKG +RPS SPWGAPV
Sbjct: 623  GLPPVREIDFTIDLLPGTTPISQAPYRMAPAELKELYVQLQELTDKGFIRPSVSPWGAPV 682

Query: 2395 LLVKKKDGSQRLCIDYRELNRVTVRNKYPLPRIDDL 2502
            L VKKKDG+ RLCIDYR+LNRVT+R+KYPLPRIDDL
Sbjct: 683  LFVKKKDGTLRLCIDYRKLNRVTIRDKYPLPRIDDL 718


>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
          Length = 923

 Score = 1083 bits (2802), Expect = 0.0
 Identities = 521/851 (61%), Positives = 662/851 (77%), Gaps = 5/851 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQL+GATVFSK+DLRSGYHQ+R+K  D+ KTAFR+RYGHY+F+VM FG+TNAPA FMDLM
Sbjct: 71   DQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYQFIVMSFGLTNAPAVFMDLM 130

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            NR F  FLD FVIVFIDDIL+YS T  +HEEHLR+VLQTLR+++LYAK SKCEF+L Q+S
Sbjct: 131  NRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVS 190

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGHV+S  G++VD  K+EAV  W  P +V EVRSFLGLAGYYRRFV++FS+IA  +T+L
Sbjct: 191  FLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQL 250

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
            TRK  PFVW++AC+ +F  LKQ+LVTAPVLT+PD  G F I+SDAS KGLGCVL Q+G+V
Sbjct: 251  TRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKV 310

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            VAYASRQLK HE+NYPTHDLELAAV+FALK+WRHYL GE+++IFTDHKSLKY FTQKE+N
Sbjct: 311  VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELN 370

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKPT--AMFLTTQRELLDEMRRMDLEVV 3578
            MRQRRWLEL+ D+D ++ YHPG+ N+  DALSRK +  A  +T Q  L  ++ R ++ V+
Sbjct: 371  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVL 430

Query: 3579 IPGQACCMP-MQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTRL 3755
            +      +  + ++ ++ ++I  +Q+ D  L E R  AEAG   +  + +DG L F  RL
Sbjct: 431  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 490

Query: 3756 CVPR-GAIRQELMAEAHSSPYSIHPGGTKMYRDLRQHY-WWHGMKREIARFVSKCLICQQ 3929
            CVP   A++ EL++EAHSSP+S+HPG T+        +     MKRE+A FVSKCL+CQQ
Sbjct: 491  CVPSDSAVKTELLSEAHSSPFSMHPGSTEDVSGPEAGFIGGRNMKREVAEFVSKCLVCQQ 550

Query: 3930 IKAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPFR 4109
            +KA  Q+ AGLLQPL IPEWKWE ++MDF+TGLPR+ RG   IWV+VDRLTKSAHF+P +
Sbjct: 551  VKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGK 610

Query: 4110 VGQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQT 4289
               +    A +YM EIVRLHGVP SIVSDRD RFTS +W  LQ ++G+RL +STAFHPQT
Sbjct: 611  STYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 670

Query: 4290 DGQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCRS 4469
            DGQ+ER  Q LEDMLRAC L+F GSW+ HLHL+EF+YNNS+QA+I MAPFEALYGR CRS
Sbjct: 671  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRS 730

Query: 4470 PVYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVFL 4649
            PV W ++GE++L+GPEL+  T   +++IR  M TAQ RQ+ +A++ ++ LEFEVGD VFL
Sbjct: 731  PVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFL 790

Query: 4650 KISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLRKYI 4829
            K++P +GV+RF  RGKLSPRF+GPF+I+ER+G VAYRLALPP+L+ VH+VFHVS LRKY+
Sbjct: 791  KVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYV 850

Query: 4830 RDESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDSTWERE 5009
             D SHV+D+  LEI  +LS   QP+ +L R  K ++NK I LV+V W      ++TWERE
Sbjct: 851  PDPSHVVDYEPLEIDENLSYVEQPVEVLARGVKTLRNKQIPLVKVLWRNHRVEEATWERE 910

Query: 5010 DQMREQYPHLF 5042
            D MR +YP LF
Sbjct: 911  DDMRSRYPELF 921



 Score =  122 bits (306), Expect = 4e-24
 Identities = 56/69 (81%), Positives = 62/69 (89%)
 Frame = +1

Query: 2296 MAPVELAELKKQVQEMLDKGLVRPSTSPWGAPVLLVKKKDGSQRLCIDYRELNRVTVRNK 2475
            MAP EL ELK Q+QE+LDKG +RPS SPWGAPVL VKKKDGS RLCIDYRELN+VTV+N+
Sbjct: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60

Query: 2476 YPLPRIDDL 2502
            YPLPRIDDL
Sbjct: 61   YPLPRIDDL 69


>gb|AIG55302.1| gag-pol, partial [Camellia sinensis]
          Length = 923

 Score = 1079 bits (2791), Expect = 0.0
 Identities = 514/851 (60%), Positives = 665/851 (78%), Gaps = 5/851 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQLKG+  FSK+DLRSGY Q+RV+  DI KTAFRTRYGHYEFLVMPFG+TNAPA FMDLM
Sbjct: 71   DQLKGSRCFSKIDLRSGYQQLRVREEDIPKTAFRTRYGHYEFLVMPFGLTNAPAVFMDLM 130

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            NR F  FLD+FV+VF+DDIL+YS + E+HEEHLR+VL+ LR H+LYAK  KCEF+L ++ 
Sbjct: 131  NRIFWEFLDRFVVVFVDDILIYSPSEEEHEEHLRVVLELLRAHRLYAKFGKCEFWLREVK 190

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGHV+S +G++VD+ KVEAVQDW  P++V E+R+FLGLAGYYR+FVKDFS++A  +T+L
Sbjct: 191  FLGHVVSGEGVSVDTSKVEAVQDWAQPKNVFEIRNFLGLAGYYRQFVKDFSRLASPLTRL 250

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
            TRK   FVW+E C+ +F ELK RL TAPVL IP++  G+A++ DAS +GLGCVL Q G+V
Sbjct: 251  TRKGVKFVWSETCEKSFQELKVRLTTAPVLIIPERGLGYAVYCDASREGLGCVLMQEGKV 310

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            VAY SRQLK+HE+NYPTHDLEL AVIFALK+WRHYL GE+ E+F+DHKS KY+FTQ+++N
Sbjct: 311  VAYGSRQLKIHEKNYPTHDLELTAVIFALKIWRHYLYGEKFEVFSDHKSFKYLFTQRDLN 370

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKP---TAMFLTTQRELLDEMRRMDLEV 3575
            +RQR W+E + D+D +L  HPG+ N+  DALSRK     A     + E+L  +   DL +
Sbjct: 371  LRQRWWMEFIEDYDFELHCHPGKANVVADALSRKTISDVACIAIREWEMLGALGEFDLLL 430

Query: 3576 VIPGQACCM-PMQIRSSIVEQIKGSQAGDAKLQELREQAEAG-LRTDIVIHADGSLRFGT 3749
                +A  +  +  + ++V ++  +Q GD +++ LRE+  +G +   + ++ + S+R+  
Sbjct: 431  GESVEAAALFSVVAQPTLVTRVLEAQRGDLEIESLREKISSGKVEKGLTVYPEQSVRYRD 490

Query: 3750 RLCVPRGAIRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQQ 3929
            RL VP    R+E++ E H S  ++HPGGTKMY+DL + +WW GMKR++A FVSKCL CQQ
Sbjct: 491  RLFVPESC-REEVLGEFHHSRLAVHPGGTKMYQDLGRQFWWRGMKRDVAVFVSKCLTCQQ 549

Query: 3930 IKAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPFR 4109
            +KAEHQR AGLLQPLPI EWKWE ITMDFV GLPR+ RG +AIWV+VDRLTKSAHF+P R
Sbjct: 550  VKAEHQRPAGLLQPLPIAEWKWEHITMDFVVGLPRTQRGSDAIWVVVDRLTKSAHFIPMR 609

Query: 4110 VGQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQT 4289
            V  S + LAD+Y+ ++VRLHGVP +IVSDRD  FT+  W SLQ +LG++L +STA+HPQT
Sbjct: 610  VRDSMDHLADLYIRDVVRLHGVPVTIVSDRDPCFTARLWQSLQSALGTKLTFSTAYHPQT 669

Query: 4290 DGQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCRS 4469
            DGQSERTIQ LEDMLR CVLDF G+WE HL LVEF+YNNSFQ+SI MAPFEALYGR CRS
Sbjct: 670  DGQSERTIQILEDMLRGCVLDFSGTWERHLPLVEFAYNNSFQSSIGMAPFEALYGRPCRS 729

Query: 4470 PVYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVFL 4649
            PV+W D+G+  LLGPEL+  T   +E IR+ + TAQ RQ+ +A+  KRA+ FEVGDHVFL
Sbjct: 730  PVFWADVGDAPLLGPELVRETTKKIELIRKRLVTAQSRQKSYADRRKRAMVFEVGDHVFL 789

Query: 4650 KISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLRKYI 4829
            KISP RG++RFG  GKLSPRFIGPF+I+ER+G+VAYRLAL P L+GVH+VF+VS L+KY 
Sbjct: 790  KISPRRGLMRFGKSGKLSPRFIGPFEILERIGEVAYRLALLPKLSGVHDVFYVSILQKYE 849

Query: 4830 RDESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDSTWERE 5009
             D SHVLD ++LE+  D S   +P+ +LDR ++V++ KTI LV+V W      ++TWERE
Sbjct: 850  PDPSHVLDWTDLEVDEDASYEERPVRVLDRRDQVLRGKTIPLVKVLWKHHGVEEATWERE 909

Query: 5010 DQMREQYPHLF 5042
             ++RE+YP +F
Sbjct: 910  LEVREKYPDMF 920



 Score =  116 bits (291), Expect = 2e-22
 Identities = 53/69 (76%), Positives = 59/69 (85%)
 Frame = +1

Query: 2296 MAPVELAELKKQVQEMLDKGLVRPSTSPWGAPVLLVKKKDGSQRLCIDYRELNRVTVRNK 2475
            MAP E  ELK Q+QE+LDKG VRPS SPWGAP L VKKKDG+ RLCIDYR+LNR TV+NK
Sbjct: 1    MAPAEFVELKVQLQELLDKGFVRPSVSPWGAPALFVKKKDGALRLCIDYRKLNRATVKNK 60

Query: 2476 YPLPRIDDL 2502
            YP+PRIDDL
Sbjct: 61   YPMPRIDDL 69


>gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1447

 Score = 1070 bits (2766), Expect = 0.0
 Identities = 505/848 (59%), Positives = 650/848 (76%), Gaps = 1/848 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQL+GA  FSK+DLRSGYHQ+R++  DI KTAFRTRYGHYEFLVM FG+TNAPA FMDLM
Sbjct: 624  DQLQGAQCFSKIDLRSGYHQLRIRNEDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLM 683

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            NR F P+LDKFV+VFIDDIL+YS + E+HE+HL+IVLQ LREH+LYAK SKCEF+L  ++
Sbjct: 684  NRVFKPYLDKFVVVFIDDILIYSKSREEHEQHLKIVLQILREHRLYAKFSKCEFWLESVA 743

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGHV+S +GI VD+KK+EAV+ WP P SV E+RSF+GLAGYYRRFVKDFSKI   +TKL
Sbjct: 744  FLGHVVSKEGIRVDTKKIEAVEKWPRPTSVSEIRSFVGLAGYYRRFVKDFSKIVAPLTKL 803

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
            TRK+  F W++AC+ +F++LK  L TAPVL++P   GG+ +  DASG GLGCVL Q G+V
Sbjct: 804  TRKDTKFEWSDACENSFEKLKACLTTAPVLSLPQGTGGYTMFCDASGVGLGCVLMQHGKV 863

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            +AYASRQLK HE+NYP HDLE+AA++FALK+WRHYL GE  EI+TDHKSLKYIF Q+++N
Sbjct: 864  IAYASRQLKRHEQNYPIHDLEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRDLN 923

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKPTAMFLTTQRELLDEMRRMDLEVVIP 3584
            +RQ RW+EL+ D+D  + YHPG+ N+  DALSRK            +  +  + +     
Sbjct: 924  LRQCRWMELLKDYDCTILYHPGKANVVADALSRKS-----------MGSLAHISI----- 967

Query: 3585 GQACCMPMQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTRLCVP 3764
                     +R  ++++IK +Q+ D  + +  E  +           DG LR+GTRL VP
Sbjct: 968  ---------VRPILMDKIKEAQSKDEFVIKALEDPQGRKGKMFTKGTDGVLRYGTRLYVP 1018

Query: 3765 RG-AIRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQQIKAE 3941
             G  +R+E++ EAH + Y +HPG TKMY+DL++ YWW G+KR++A FVSKCL+CQQ+KAE
Sbjct: 1019 DGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVKAE 1078

Query: 3942 HQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPFRVGQS 4121
            HQ+ AGLLQPLP+PEWKWE I MDFVTGLPR+  G+++IW++VDRLTKSAHFLP +    
Sbjct: 1079 HQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFLPVKTTYG 1138

Query: 4122 TESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQTDGQS 4301
                A +Y+ EIVRLHG+P SIVSDR  +FTS +W  LQE+LG++L +STAFHPQTDGQS
Sbjct: 1139 AAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQS 1198

Query: 4302 ERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCRSPVYW 4481
            ERTIQTLE MLRACV+D G  WE +L LVEF+YNNSFQ SI+MAPFEALYGR+CRSP+ W
Sbjct: 1199 ERTIQTLEAMLRACVIDLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGW 1258

Query: 4482 DDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVFLKISP 4661
             ++GERKLLGPEL+      +  IRQ M TAQ RQ+ +A+  +R LEF+VGDHVFLK+SP
Sbjct: 1259 LEVGERKLLGPELVQDATEKIHMIRQRMLTAQSRQKSYADNRRRDLEFQVGDHVFLKVSP 1318

Query: 4662 TRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLRKYIRDES 4841
            T+GV+RFG +GKLSPR+IGPF+I+E+VG VAYRLALPP L+ +H VFHVS LRKY  D S
Sbjct: 1319 TKGVMRFGKKGKLSPRYIGPFEILEKVGAVAYRLALPPDLSNIHPVFHVSMLRKYNPDPS 1378

Query: 4842 HVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDSTWEREDQMR 5021
            HV+ +  ++++ DL+   QP+AILDR  K +++K +  V+V W   +  + TWE ED+MR
Sbjct: 1379 HVIRYETIQLQDDLTYEEQPVAILDRQVKKLRSKDVASVKVLWRNHTSEEVTWEAEDEMR 1438

Query: 5022 EQYPHLFE 5045
             ++PHLF+
Sbjct: 1439 TKHPHLFD 1446



 Score =  254 bits (649), Expect = 2e-64
 Identities = 137/289 (47%), Positives = 184/289 (63%), Gaps = 16/289 (5%)
 Frame = +1

Query: 1684 FTLTAEQAEVAGDVVTGTISVYSQPAFALFDSGASRCFVSARFVSMHSIPYISLDVFWTI 1863
            F LT ++A+ +  VV+G +SV +  A  LFD GA+  F+S  F S      +  +    +
Sbjct: 334  FALTQQEAQTSNAVVSGILSVCNMNARVLFDPGATHSFISTCFASRLGRGRVRREEQLVV 393

Query: 1864 STGNGSVSCGK-ECRDCLIVVGDHSFLADLLVIDNCEFDVILGMDWLSGCHAMIDCRRRA 2040
            ST    +   + E   C++ V D     +L+V+D  +FDVILGM+WLS CHA +DC  + 
Sbjct: 394  STPLKEIFVAEWEYESCVVRVKDKDTSVNLVVLDTLDFDVILGMNWLSPCHASVDCYHKL 453

Query: 2041 VVFRMPGLPEFEFIGDVSPHQSDRVS-IRARFMM----------MEEQQESVTP----AL 2175
            V F  PG P F   GD S   ++ +S I AR ++          +++ Q  +      ++
Sbjct: 454  VRFDFPGEPSFSIQGDRSNAPTNLISVISARRLLRQGCIGYLAVVKDSQAKIGDVTQVSV 513

Query: 2176 ISEFLDVFPEDLPGLPPEREVEFAIEVFSGTGPISKAPYRMAPVELAELKKQVQEMLDKG 2355
            + EF+DVFPE+LP LPPEREVEF I++   T PIS  PYRMAP EL ELK Q++++LDKG
Sbjct: 514  VKEFVDVFPEELPSLPPEREVEFCIDLIPDTRPISIPPYRMAPAELKELKDQLEDLLDKG 573

Query: 2356 LVRPSTSPWGAPVLLVKKKDGSQRLCIDYRELNRVTVRNKYPLPRIDDL 2502
             +RPS SPWGAPVL VKKKDGS RLCIDYR+LN+VTV+NKYPLPRIDDL
Sbjct: 574  FIRPSVSPWGAPVLFVKKKDGSLRLCIDYRQLNKVTVKNKYPLPRIDDL 622



 Score = 84.0 bits (206), Expect = 3e-12
 Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 5/222 (2%)
 Frame = +1

Query: 595  MLQAQQRQTEIFQEGLLRAQQTATAAMERSTAPREAKPGNVS----DFRRLQPATFAGTE 762
            M+  +    +   EG    Q++ ++  +      E + G++     DF +L+P TF+G++
Sbjct: 1    MMATRMEDIQRVVEGRPTVQESPSSQGQADHQHHEEERGHLDISLPDFLKLKPPTFSGSD 60

Query: 763  TPLDADQWLVDMTNLLSAARIPEKDMVEVVKIQLTDIARTWWMTEEERYDLAEGEFISWE 942
                   +L  M  +  A        VE+   QL D+A+ W+ +   R        ++W 
Sbjct: 61   ASEKPQVFLDKMEKICKALGCSSVRSVELAAFQLEDVAQEWY-SSLCRGRPTNATPLAWS 119

Query: 943  MFSAAFLVRFFPKSAKKQMEQQFVNLVQ-GDRSVDAYAAEFIRLSRFAPKLVMDEEDRAD 1119
             FS AFL RF P S +    ++F  LVQ    +V  Y  +F +L+R+AP LV  EE +  
Sbjct: 120  EFSVAFLDRFLPLSVRNARAREFETLVQTSSMTVSEYDIKFTQLARYAPYLVSTEEMKIQ 179

Query: 1120 RFQQGLRLEIQMQQSSQELETYDQVLTAARKAELLIQKKAAS 1245
            RF  GL   +    +S++  TY   +  A++ E+   +  A+
Sbjct: 180  RFVDGLVEPLFRAVASRDFTTYSTAVDRAQRIEMRTSESRAA 221


>ref|XP_017216862.1| PREDICTED: uncharacterized protein LOC108194427 [Daucus carota subsp.
            sativus]
          Length = 1810

 Score = 1069 bits (2765), Expect = 0.0
 Identities = 508/851 (59%), Positives = 657/851 (77%), Gaps = 4/851 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQL+GA VFSK+DLRSGYHQ+++   DI KTAFRTRYGH+EFLVMPFG+TNAPA FM LM
Sbjct: 950  DQLQGAQVFSKIDLRSGYHQLKIAKEDIPKTAFRTRYGHFEFLVMPFGLTNAPAVFMALM 1009

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            N+ F PFLDKFVIVFIDDILVYS +  +HEEHLRI LQ LRE+QLYAKLSKCEF+L  + 
Sbjct: 1010 NKVFQPFLDKFVIVFIDDILVYSKSKSEHEEHLRIALQILRENQLYAKLSKCEFWLDHVV 1069

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGHVISS+GI VD KK+EA+ +W +P++V EVRSFLG+AGYYRRFV+ FSKIA  MTKL
Sbjct: 1070 FLGHVISSKGIEVDPKKIEAIWNWEVPKNVTEVRSFLGMAGYYRRFVEGFSKIAGPMTKL 1129

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
             RKN PF WTE  Q +FDELK+RL +APVLT P  QGGF ++SDAS +GLGCVL Q G+V
Sbjct: 1130 LRKNVPFQWTEEAQQSFDELKRRLTSAPVLTTPSGQGGFVVYSDASQQGLGCVLMQYGKV 1189

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            +AYASRQL+ HE++YP HDLELAA++FALK+WRHYL GE  +IFTDHKSLKY+ +QKE+N
Sbjct: 1190 IAYASRQLRPHEKSYPVHDLELAAIVFALKIWRHYLYGETFQIFTDHKSLKYLMSQKELN 1249

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRK--PTAMFLTTQRELLDEMRRMDLEVV 3578
            MRQRRW+EL+ D+D  L+YHPG+ N+  DALSRK    A    +    L E+R+M++ + 
Sbjct: 1250 MRQRRWVELLKDYDCTLEYHPGKANIVADALSRKCSSVANLQGSTFPSLVELRKMNIGLE 1309

Query: 3579 IPGQACCMP-MQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTRL 3755
            +      +  + IR  + E+I+ +Q  D KL++  E+   G      ++ D +L  G R+
Sbjct: 1310 VDTCGVLLATLNIRPVLKERIQKAQINDPKLRDAVERVRQGQENQFTLYED-TLMLGNRI 1368

Query: 3756 CVPRGA-IRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQQI 3932
            CVP    +R+E++ EAH++PY++HPG TKMY  ++ HYWW GMKR++A F +KCL CQQ+
Sbjct: 1369 CVPNDEDLRREILDEAHNAPYAMHPGATKMYNTMKSHYWWSGMKRDVAEFTAKCLTCQQV 1428

Query: 3933 KAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPFRV 4112
            K EHQ  AG L PL IPEWKWEKITMDFVT LP++ +G++AIW+IVDRLTKSAHFLP R 
Sbjct: 1429 KVEHQAPAGKLHPLSIPEWKWEKITMDFVTNLPKTRKGNDAIWIIVDRLTKSAHFLPIRW 1488

Query: 4113 GQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQTD 4292
            G + + LA  Y++EIVRLHGVP SIVSDRD RFTS +W SLQE++G+RL +STAFHPQTD
Sbjct: 1489 GCTLDHLAQRYVNEIVRLHGVPISIVSDRDPRFTSRFWKSLQEAMGTRLNFSTAFHPQTD 1548

Query: 4293 GQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCRSP 4472
            GQSERTIQTLE+MLRACV++F GSW++++ L+EF+YNN F +SI MAP+EALYGRKCRSP
Sbjct: 1549 GQSERTIQTLEEMLRACVIEFKGSWDEYIALMEFAYNNHFHSSIGMAPYEALYGRKCRSP 1608

Query: 4473 VYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVFLK 4652
            +YWD  G   L GPEL+   V  V  ++  +K  QDRQ+ + + ++R +E++VGD VFLK
Sbjct: 1609 LYWDKEGTIILEGPELVQNAVDKVNIVKAKLKATQDRQKSYVDQNRREMEYQVGDKVFLK 1668

Query: 4653 ISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLRKYIR 4832
            +SP +GV+RF  +GKLSPR+IGP++IIE++G +AYRLALPP L+ +H+VFHVS LR+Y  
Sbjct: 1669 VSPWKGVMRFSNKGKLSPRYIGPYEIIEKIGPLAYRLALPPELSQIHDVFHVSMLRRYRS 1728

Query: 4833 DESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDSTWERED 5012
            D +HVL    +EI  +LS   +P+ I+    K ++N+ I LV+V W   +  ++TWE E+
Sbjct: 1729 DPTHVLKDPGIEINDNLSYIEEPVKIIGHKTKQLRNREIPLVKVLWRNHAVEEATWETEE 1788

Query: 5013 QMREQYPHLFE 5045
             MR +YPHLF+
Sbjct: 1789 HMRSKYPHLFD 1799



 Score =  254 bits (648), Expect = 4e-64
 Identities = 140/318 (44%), Positives = 189/318 (59%), Gaps = 16/318 (5%)
 Frame = +1

Query: 1597 GQVQARPAYPPQSVAFXXXXXXXXXXXAAFTLTAEQAEVAGDVVTGTISVYSQPAFALFD 1776
            G+ QA+ + PP                  F LT  +AE A +V+TG + +Y   A+ L D
Sbjct: 644  GRSQAQSSNPPTQAR-------------VFALTRGEAEAAPEVITGKVLLYQLDAYVLID 690

Query: 1777 SGASRCFVSARFVSMHSIPYISLDVFWTISTGNGSVSCGKEC-RDCLIVVGDHSFLADLL 1953
             G++  F+S++  S     +  LD+   + T  G V    +  RDC I +G+    ADL+
Sbjct: 691  PGSTHSFISSKMTSHLHRSHEILDLKVNVHTPLGEVEVVDQIYRDCPIEIGNTELKADLI 750

Query: 1954 VIDNCEFDVILGMDWLSGCHAMIDCRRRAVVFRMPGLPEFEFIGDVSPHQSDRVSIRARF 2133
            V+   EFD+ILGMDWL+  HA +DC  + V    PG     F G+     S  +S  + F
Sbjct: 751  VLPFQEFDIILGMDWLTRHHAKVDCYAKEVTIESPGQGRVVFQGECRMIFSCLISAMSAF 810

Query: 2134 MMMEEQQESV---------------TPALISEFLDVFPEDLPGLPPEREVEFAIEVFSGT 2268
             M+ +  E+                T  ++ EF DVFP+DLPG+PP+R++EF+IE   G+
Sbjct: 811  KMIRKGCEAYLAHVVDPNINSTKLETIPIVREFPDVFPDDLPGMPPDRDIEFSIETVPGS 870

Query: 2269 GPISKAPYRMAPVELAELKKQVQEMLDKGLVRPSTSPWGAPVLLVKKKDGSQRLCIDYRE 2448
             PIS  PYRMAPVEL ELKKQ+ E+L+KG +RPS SPWGAPVL VKKKDG+ RLCIDYR+
Sbjct: 871  TPISIPPYRMAPVELKELKKQLIELLEKGFIRPSVSPWGAPVLFVKKKDGTMRLCIDYRK 930

Query: 2449 LNRVTVRNKYPLPRIDDL 2502
            LN+VTV+NKYPLPRIDDL
Sbjct: 931  LNQVTVKNKYPLPRIDDL 948



 Score =  231 bits (589), Expect = 3e-57
 Identities = 166/569 (29%), Positives = 261/569 (45%), Gaps = 41/569 (7%)
 Frame = +1

Query: 712  NVSDFRRLQPATFAGTETPLDADQWLVDMTNLLSAARIPEKDMVEVVKIQLTDIARTWWM 891
            N  + R+L    F GT  P +A+ WL     + +     +++  +     L D A  WW 
Sbjct: 75   NYKELRKLGATDFYGTVDPTEAESWLKRTKRVFNMMHCEDEEKFDYAVSLLQDDAYDWWE 134

Query: 892  TEEERYDLAEGEFISWEMFSAAFLVRFFPKSAKKQMEQQFVNLVQGDRSVDAYAAEFIRL 1071
            T  +    A+   ++W+ F   F  ++ P+  + + +++F+NL QG+ +V  Y  +F +L
Sbjct: 135  TIPDSD--AQPPKLTWDDFQREFKDKYMPEIYRDEKQREFLNLKQGNMTVAEYEVKFTQL 192

Query: 1072 SRFAPKLVMDEEDRADRFQQGLRLEIQMQQSSQELETYDQVLTAARKAELLIQKKAA--- 1242
            SR+A  +V  E D+  RF++GL+ EI+ + +  EL +Y  +  AA +AE LI++K A   
Sbjct: 193  SRYASSMVATERDKCRRFEEGLKYEIRSKITIGELRSYTDLRAAAIRAERLIKEKPAFFS 252

Query: 1243 ---------SGYHG--QQKRPY--GQMTSVAQPSQRAAQ-----IPRSTXXXXXXXXXXX 1368
                     +G  G   +KRP       S+ +     AQ      PRS            
Sbjct: 253  KSKREETRFAGEAGGRPKKRPNVSAPTKSITRGGFSGAQGGRLNNPRSNPTLSRGSNVQV 312

Query: 1369 XXXCSFCQRTGHLKKDCHRANGACLACGSMDHKIAQCPNGRRHLETGATAPGQ---IRXX 1539
               C  C R  H  + C    G C  CG   H I  CPN R +++  +    Q   ++  
Sbjct: 313  KPTCQTCGRQ-HFGQ-CRAQTGGCYLCGEQGHFIRDCPNKRENVQAVSEPSVQNVEVKGV 370

Query: 1540 XXXXXXXXXXXXI-QTRPPAGQVQARPAYPPQSVAFXXXXXXXXXXXAAFTLTAEQAEVA 1716
                           T    G+ QA+ + PP                  F LT  +AE A
Sbjct: 371  GTSFGRGRGKKGTGSTGGGIGRSQAQSSNPPTQAR-------------VFALTRGEAEAA 417

Query: 1717 GDVVTGTISVYSQPAFALFDSGASRCFVSARFVSMHSIPYISLDVFWTISTGNGSVSCGK 1896
             +V+TG + +Y   A+AL D G++  F+S++  S     +  LD+   + T  G V    
Sbjct: 418  PEVITGKVLLYQLDAYALIDPGSTHSFISSKMTSHLHRSHEILDLKVNVHTPLGEVEVVD 477

Query: 1897 EC-RDCLIVVGDHSFLADLLVIDNCEFDVILGMDWLSGCHAMIDCRRRAVVFRMPGLPEF 2073
            +  RDC I +G+    ADL+V+   EFD+ILGMDWL+  HA +DC  + V    PG    
Sbjct: 478  QIYRDCPIEIGNTELKADLIVLPFQEFDIILGMDWLTRHHAKVDCYAKEVTIESPGQGRV 537

Query: 2074 EFIGDVSPHQSDRVSIRARFMMMEEQQESV---------------TPALISEFLDVFPED 2208
             F G+     S  +S  + F M+ +  E+                T  ++ EF DVFP+D
Sbjct: 538  VFQGECRMIFSCLISAMSAFKMIRKGCEAYLAHVVDPNTNSTKLETIPIVREFPDVFPDD 597

Query: 2209 LPGLPPEREVEFAIEVFSGTGPISKAPYR 2295
            LPG+PP+R++EF+IE   G+ PIS  PY+
Sbjct: 598  LPGMPPDRDIEFSIETVPGSTPISIPPYQ 626


>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score = 1063 bits (2750), Expect = 0.0
 Identities = 504/853 (59%), Positives = 654/853 (76%), Gaps = 6/853 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQL+GA +FSK+DLRSGYHQ+R+   DI KTAFRTRYGHYEF VMPFG+TNAPA FMDLM
Sbjct: 670  DQLQGAGMFSKIDLRSGYHQLRIVDHDIPKTAFRTRYGHYEFTVMPFGLTNAPAVFMDLM 729

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            NR F P+LDKFV+VFIDDIL+YS   E+HE+HLR++LQTLR++QLYAK SKCEF+L ++S
Sbjct: 730  NRIFRPYLDKFVVVFIDDILIYSKNKEEHEDHLRVILQTLRDNQLYAKFSKCEFWLERVS 789

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGH IS +G+ VD  K++AV +WP P++V ++RSFLGLAGYYRRFVKDFSKIA+ MT L
Sbjct: 790  FLGHFISKEGVLVDPAKIKAVSEWPTPKNVTDIRSFLGLAGYYRRFVKDFSKIAKPMTNL 849

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
             +K+  F W E  + AF  LK+RL +APVLT+P+   G+ ++SDAS  GLGCVL Q G+V
Sbjct: 850  MKKDCRFTWNEDSEKAFQTLKERLTSAPVLTLPNGNEGYDVYSDASKNGLGCVLMQNGKV 909

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            +AYASRQLK +E NYPTHDLELAA++FALK+WRHYL G    IFTDHKSLKYIFTQK++N
Sbjct: 910  IAYASRQLKPYEVNYPTHDLELAAIVFALKIWRHYLYGVTCRIFTDHKSLKYIFTQKDLN 969

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKPTAMF--LTTQRELLDEMRRMDLEVV 3578
            MRQRRWLEL+ D+D+D+QYH G+ N+  DALSRK +     L    +L +E  R+ +EVV
Sbjct: 970  MRQRRWLELIKDYDLDIQYHEGKANVVADALSRKSSHSLNTLVVADKLCEEFSRLQIEVV 1029

Query: 3579 IPGQA--CCMPMQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTR 3752
              G+       + I  + +E+I+ SQ GD KL+ ++ + + G      IH DGS+R+  R
Sbjct: 1030 HEGEVERLLSALTIEPNFLEEIRASQPGDVKLERVKAKLKEGKAEGFAIHEDGSIRYKGR 1089

Query: 3753 LCVPRGA--IRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQ 3926
             CVP+    ++Q++M+E H++ Y +HPGG K+Y+DL++ +WW GMKR +A FVSKCL CQ
Sbjct: 1090 WCVPQKCEELKQKIMSEGHNTTYYVHPGGDKLYKDLKKMFWWPGMKRAVAEFVSKCLTCQ 1149

Query: 3927 QIKAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPF 4106
            ++K+EH+R  G +QPL IP WKW+ I+MDFV  LPRS  G+N IWVIVDRLTK+A F+P 
Sbjct: 1150 KVKSEHKRPQGKIQPLDIPTWKWDSISMDFVVALPRSRGGNNTIWVIVDRLTKTARFIPM 1209

Query: 4107 RVGQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQ 4286
            +   S E+LA  Y+  ++RLHGVP SIVSD+D+RF S++W  +QE+ GS L  STAFHP 
Sbjct: 1210 KDTWSMEALAKAYVKNVIRLHGVPTSIVSDQDSRFLSNFWKKVQEAFGSELLMSTAFHPA 1269

Query: 4287 TDGQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCR 4466
            TDGQ+ERTIQTLEDMLRAC L++ GSWEDHL L+EFSYNNS+ ASI+MAPFEALYGRKCR
Sbjct: 1270 TDGQTERTIQTLEDMLRACALEYQGSWEDHLDLIEFSYNNSYHASIKMAPFEALYGRKCR 1329

Query: 4467 SPVYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVF 4646
            SP+ W+DI E  +LGP++I  T+  V  I++ +KTAQDRQ+ +A+  +R   FEVG+ V 
Sbjct: 1330 SPLCWNDISETVVLGPDMIQETMDQVRVIQEKIKTAQDRQKSYADQKRRDENFEVGEKVL 1389

Query: 4647 LKISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLRKY 4826
            LK+SP +GV+RFG +GKLSP+FIGP++I+ RVGKVAYRL LP  L  VHNVFHVSQLR+Y
Sbjct: 1390 LKVSPMKGVMRFGKKGKLSPKFIGPYEILARVGKVAYRLDLPNDLERVHNVFHVSQLRRY 1449

Query: 4827 IRDESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDSTWER 5006
            + D SHVL+   +EI   LS   +P+ ILDR  +  +NK +R+V+V W  Q+  ++TWE 
Sbjct: 1450 VPDASHVLEPENVEIDETLSYEEKPVQILDRKVRSTRNKDVRIVKVLWRNQTTEEATWEA 1509

Query: 5007 EDQMREQYPHLFE 5045
            ED MR +YP LF+
Sbjct: 1510 EDAMRLKYPELFQ 1522



 Score =  302 bits (773), Expect = 2e-79
 Identities = 211/652 (32%), Positives = 305/652 (46%), Gaps = 47/652 (7%)
 Frame = +1

Query: 688  APREAKPGNVSD-FRRLQPATFAGTETPLDADQWLVDMTNLLSAARIPEKDMVEVVKIQL 864
            A   ++ G++S+   R  P    G   P + + W+ +   L      P++  V +    L
Sbjct: 29   AQGHSRDGDLSEKVARRNPPILNGKGGPEELENWVGEFDKLFFTLSCPDEKTVPLASYYL 88

Query: 865  TDIARTWWMTEEERYDLAEGEFISWEMFSAAFLVRFFPKSAKKQMEQQFVNLVQGDRSVD 1044
               A  WW   ++  +L       WE F  A   +++P   KKQ  Q+F+ L QG+ SV+
Sbjct: 89   QGDAHFWWTQAKD--NLLSQPGFGWETFKKALRDKYYPPYLKKQKAQEFMMLEQGNMSVE 146

Query: 1045 AYAAEFIRLSRFAPKLVMDEEDRADRFQQGLRLEIQMQQSSQELETYDQVLTAARKAELL 1224
             Y  +FI L RFAP++   EE +A RF+ GL L++Q +       + D V    + A L 
Sbjct: 147  EYYRKFIELMRFAPEIAPTEEAKASRFELGLTLDLQGRLGGDTFTSLDHVF--GKVAHLY 204

Query: 1225 -IQKKAASGYHGQQKR----PYGQMTSVAQPSQRAAQIPR------------------ST 1335
             I+K+   G  G++++    P GQ         +  Q P+                  + 
Sbjct: 205  AIRKREEGGKLGEKRKDNPNPEGQKFEKKHNGNQNNQNPQRNFGKGPNNNPNPNNNNNNR 264

Query: 1336 XXXXXXXXXXXXXXCSFCQRTGHLKKDCHRANGACLACGSMDHKIAQC-------PNGRR 1494
                          C  C    H  KDC      C  CG M H+  +C       PNG+R
Sbjct: 265  NNNTNNRRPERVYRCRKCPNN-HPGKDCEGNKVECRECGKMGHRAYECYSKNKLNPNGQR 323

Query: 1495 HLETGATAPGQIRXXXXXXXXXXXXXXIQTRPPAGQVQARPAYPPQSVAFXXXXXXXXXX 1674
                G   P                       PA     + +    + +           
Sbjct: 324  KGNYG-DKPRNGNGNGNGNGGGNYNGNSNYSKPATNTSNQVSNVNNATS-----SQDKGK 377

Query: 1675 XAAFTLTAEQAEVAGDVVTGTISVYSQPAFALFDSGASRCFVSARFV-SMHSIPYISLDV 1851
               + +TA + E   DVVTGT S+ S P   LFDSGAS  F++   V ++  +   S+ +
Sbjct: 378  GKLYMMTAREEEARRDVVTGTFSINSTPVKVLFDSGASLSFIAHATVRNLTLVESESISM 437

Query: 1852 FWTISTGNGSVSCGKECRDCLIVVGDHSFLADLLVIDNCEFDVILGMDWLSGCHAMIDCR 2031
               I +G  +V+C K      + +G+  F +DL+  +    D+ILGMDWL    A IDC 
Sbjct: 438  PIVIPSGE-TVNCSKRFLKVPLKIGEGYFPSDLIEFNLSNLDIILGMDWLGKYMARIDCD 496

Query: 2032 RRAVVFRMPG--------LPEFEFIGDVSPHQSDRVSIRARFMMM----EEQQESVTPA- 2172
             + V  + P         +P    I  ++  Q      +   + M      + + + P  
Sbjct: 497  AQKVELKDPSGKRVSYRRIPREPGIKVINALQLKNYVDKGWPLFMCSVRRVEDDPLRPED 556

Query: 2173 --LISEFLDVFPEDLPGLPPEREVEFAIEVFSGTGPISKAPYRMAPVELAELKKQVQEML 2346
              ++ EF DVFPE++PG+PP R+VEF +++  GTGPISKA YRMAP E+ ELK Q++E+L
Sbjct: 557  VPIVREFQDVFPEEIPGMPPRRDVEFTVDLVPGTGPISKATYRMAPAEMNELKNQLEELL 616

Query: 2347 DKGLVRPSTSPWGAPVLLVKKKDGSQRLCIDYRELNRVTVRNKYPLPRIDDL 2502
            DKG +RPS SPWGAPVL VKKKDGS RLCIDYRELN VTV+NKYPLPRIDDL
Sbjct: 617  DKGYIRPSMSPWGAPVLFVKKKDGSLRLCIDYRELNNVTVKNKYPLPRIDDL 668


>gb|OMO65975.1| reverse transcriptase [Corchorus capsularis]
          Length = 868

 Score = 1056 bits (2730), Expect = 0.0
 Identities = 516/850 (60%), Positives = 647/850 (76%), Gaps = 4/850 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQL+GA VFSK+DLRS YHQ++++  DI+KTAFRTRYGHYEFLVM F +TNAPA FMDLM
Sbjct: 17   DQLRGAGVFSKIDLRSSYHQLKIRPGDIEKTAFRTRYGHYEFLVMFFALTNAPAAFMDLM 76

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            NR F  +LDKFVIVFIDDILVYSA   +H +HL IVLQTLREH+LYAKLSKCEF+L+Q++
Sbjct: 77   NRIFHQYLDKFVIVFIDDILVYSANEHEHAQHLHIVLQTLREHRLYAKLSKCEFWLTQVA 136

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGH+IS  GI VD  K+EA+ +W  PR+V E+RSFLGLAGYYRRFV+ FS IA  +T+L
Sbjct: 137  FLGHIISKDGICVDPAKIEAILNWESPRTVTEIRSFLGLAGYYRRFVEGFSLIAAPLTRL 196

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
            TRK  PF W + C+ +F ELKQRLV+AP+LT+P    G+ ++S+AS + LGCVL Q  +V
Sbjct: 197  TRKGVPFEWDDKCEKSFQELKQRLVSAPILTLPTSGRGYVVYSNASQEDLGCVLMQDDKV 256

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            +AYA RQLK HE NYPTHDLELA V+FALK+WRHYL G + ++FTDHKSLKY+ TQKE+N
Sbjct: 257  IAYAYRQLKKHEENYPTHDLELAVVVFALKIWRHYLYGAQRQVFTDHKSLKYLMTQKELN 316

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKPTAMFLTTQREL--LDEMRRMDLEVV 3578
            +RQRRWLEL+ D+D+ + YHPG+ N+  DALSRK +      +  L  L  +  M   ++
Sbjct: 317  LRQRRWLELIKDYDLVIDYHPGKTNVVTDALSRKSSTTMARIKSYLPQLVGVCSMGANLI 376

Query: 3579 IPGQACCMP-MQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTRL 3755
               Q   +   ++R ++V+QIK  Q  D KL    E+   G+ ++  +  DG L+   R+
Sbjct: 377  GGYQGTLLARFEVRPTLVDQIKELQEVDEKLSAELEKLYLGVPSEYSLRDDGVLQKFGRV 436

Query: 3756 CVPRGA-IRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQQI 3932
            C P    +++ ++ EAHSS Y++HPG TKMYR +R+ YWW GMK++IA FVS+CL+CQQ+
Sbjct: 437  CAPDNEELKRAVLEEAHSSAYALHPGITKMYRTIRESYWWPGMKKDIAEFVSRCLVCQQV 496

Query: 3933 KAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPFRV 4112
            KAEHQ+ AG LQPLPIPEWKWE ITMDF+ GLPR  RGH+AIWVIVDRLTKSAHFL  R+
Sbjct: 497  KAEHQKPAGTLQPLPIPEWKWEHITMDFIVGLPRIRRGHDAIWVIVDRLTKSAHFLLVRI 556

Query: 4113 GQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQTD 4292
              STE LA +Y+ EIVRLHGVP SIV DRD RFTS +W  LQ +LG+RLK+STAFHPQTD
Sbjct: 557  TFSTERLARLYVAEIVRLHGVPVSIVLDRDPRFTSRFWPKLQHALGTRLKFSTAFHPQTD 616

Query: 4293 GQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCRSP 4472
            GQ ER IQTLEDMLRACVL+F GSW DH+ L EF+YNNS+QASI MAP+EALYGRKCR+P
Sbjct: 617  GQFERIIQTLEDMLRACVLEFHGSWADHVALAEFAYNNSYQASIGMAPYEALYGRKCRTP 676

Query: 4473 VYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVFLK 4652
            V WD++GERKLL  ELI   V  V+ IR  +K AQDRQ+ +A+  +R LEFEVGD VFLK
Sbjct: 677  VCWDEVGERKLLNIELIDDMVEKVKMIRNRLKIAQDRQKSYADHRRRDLEFEVGDAVFLK 736

Query: 4653 ISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLRKYIR 4832
            +SP +GVIRF   GKL+PR+IGPF+I+ER+G VAYRL LP  L  +H+VFHVS LRKY+ 
Sbjct: 737  VSPWKGVIRFCKGGKLAPRYIGPFEIVERIGPVAYRLNLPSELGRIHDVFHVSMLRKYVL 796

Query: 4833 DESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDSTWERED 5012
            D SHVL    +E+   L+   QP+ ILDR    ++NK + +V+V W  Q+  + TWE E+
Sbjct: 797  DPSHVLQALPVELDEKLNSEVQPVGILDRQMTNLRNKQVPIVKVLWRSQTVEEMTWEPEE 856

Query: 5013 QMREQYPHLF 5042
             MR+QYPHLF
Sbjct: 857  AMRKQYPHLF 866


>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
          Length = 1152

 Score = 1052 bits (2720), Expect = 0.0
 Identities = 501/862 (58%), Positives = 652/862 (75%), Gaps = 3/862 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            +QL+G  VFSK+DLRSGYHQ+++K +D  KTAF TRYGHYEFLVMPFG+TNAP+ FMDLM
Sbjct: 291  NQLQGKKVFSKIDLRSGYHQLKIKVADRPKTAFSTRYGHYEFLVMPFGLTNAPSAFMDLM 350

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
             R F P+LDKFV+VFIDDIL+YS   ++HEEHLRIVLQTL+E +LYAK SKCEF+L Q+S
Sbjct: 351  QRVFMPYLDKFVVVFIDDILIYSKDEKEHEEHLRIVLQTLKEKKLYAKFSKCEFWLKQVS 410

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGHVIS  GI VD  K+EAV  WP P +V E+RSFLGLAGYYR+FV+DFSKIA  +T+L
Sbjct: 411  FLGHVISGDGIQVDPAKIEAVSKWPRPTTVTEIRSFLGLAGYYRKFVQDFSKIATPLTRL 470

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
            T+KN  F W++ C+ AF  LK +L  APVL +P+    + +++DASG+GLGCVL Q G+V
Sbjct: 471  TQKNIKFEWSKECEEAFQTLKDKLTVAPVLALPEVFDNYDVYTDASGQGLGCVLMQAGKV 530

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            +AYASRQLKVHE+NYPTHDLELAAV+FALK WRHYL G +  IFTDHKSLK+ FTQ+ +N
Sbjct: 531  IAYASRQLKVHEKNYPTHDLELAAVVFALKQWRHYLYGVKARIFTDHKSLKFFFTQENLN 590

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKPTAMFLTTQRELLDEMRRMDLEVVI- 3581
            MRQRRWLE + D+D+D+QYHPG+ N+  DALSR+P    +TT +E++ ++  + ++VV  
Sbjct: 591  MRQRRWLEFVKDYDLDIQYHPGKANVVADALSRRPVNA-ITTLQEVIHQLDSLQIQVVER 649

Query: 3582 PGQACCM-PMQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTRLC 3758
             G+A C  P+  RS +++ I+  Q  D  L +L+  A         +  +G L +G RLC
Sbjct: 650  EGEAQCFAPLMARSELLDDIRAKQDEDPVLVDLKRVAREKPTVGYQLDKNGHLWYGDRLC 709

Query: 3759 VPR-GAIRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQQIK 3935
            VP    +RQ++M EAH   +++HPG TKMYRDL++ YWW GMK  IA FV+KC  CQ++K
Sbjct: 710  VPDVDGLRQQVMDEAHKIAFAVHPGSTKMYRDLKERYWWLGMKLNIAEFVAKCDTCQRVK 769

Query: 3936 AEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPFRVG 4115
            AEH+R  GLL+PL +PEWKWE ITMDF+TGLPR+  GH+ IWVIVDRLTKSAHFLP +V 
Sbjct: 770  AEHRRPGGLLKPLEVPEWKWENITMDFITGLPRTKSGHDMIWVIVDRLTKSAHFLPCKVD 829

Query: 4116 QSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQTDG 4295
               +    +Y+  IVRLHGVP SIVSDRD+RF SH+W  LQ++  ++   STAFHPQTDG
Sbjct: 830  MPIKKFTQLYLDNIVRLHGVPLSIVSDRDSRFISHFWKGLQKAFETKTDLSTAFHPQTDG 889

Query: 4296 QSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCRSPV 4475
            QSERTIQTLEDMLRACVL+ GGSW+D L + EF+YNNS+ AS+ M PFEALYGRKCR+P+
Sbjct: 890  QSERTIQTLEDMLRACVLEVGGSWDDFLSVAEFAYNNSYHASLGMPPFEALYGRKCRTPL 949

Query: 4476 YWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVFLKI 4655
            YWD++GE++  GPEL+ +    VE IR+++K AQDRQ+ WA+I +R LEF VGD V+L+ 
Sbjct: 950  YWDEVGEKQYTGPELVEQAKEKVELIRKNLKAAQDRQKSWADIRRRPLEFAVGDRVYLRA 1009

Query: 4656 SPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLRKYIRD 4835
            SP +GV RFG +GKLSPR++GPFDIIER+GK+AYRL LP +++ VHNVFHVS L+K +  
Sbjct: 1010 SPMKGVKRFGQKGKLSPRYVGPFDIIERIGKLAYRLRLPESMSRVHNVFHVSMLKKCLSS 1069

Query: 4836 ESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDSTWEREDQ 5015
                   +   ++ +LS   +P+ ILDR EK++K + I LV VQW+  SP ++TWE E+ 
Sbjct: 1070 TDVESQFNPEMLQDNLSYIEKPVKILDRKEKIVKRRIIPLVLVQWSNHSPSEATWEEEEV 1129

Query: 5016 MREQYPHLFE*LVFSFPFQHFN 5081
            + +++P  FE L  +  F+  N
Sbjct: 1130 IADEFPE-FENLPGTLKFRGRN 1150



 Score =  221 bits (562), Expect = 2e-54
 Identities = 123/276 (44%), Positives = 171/276 (61%), Gaps = 19/276 (6%)
 Frame = +1

Query: 1732 GTISVYSQPAFALFDSGASRCFVSARFVSMHSIPYISLDVFWTISTGNGSVSCGKECRDC 1911
            GTI + +    ALFD+GAS  FVS++     ++P   L+   +I+T  G V+   +    
Sbjct: 14   GTIIIDNLAVSALFDTGASGTFVSSKIARKLNLPLQELEKPLSITTPLGRVTKVAQVLPQ 73

Query: 1912 LIV-VGDHSFLADLLVIDNCEFDVILGMDWLSGCHAMIDCRRRAVVFRMPGLPEFEFIGD 2088
            + V VG +   +DL V+D   FDVILGMDWLS     +DCR + V+FR+PG  +  F G+
Sbjct: 74   VDVRVGAYRCKSDLTVLDFTNFDVILGMDWLSKNFVHVDCRGKKVIFRVPGKSDKTFQGN 133

Query: 2089 VSPHQSDRVSIRARFMMMEEQQ-------------ESVTPAL-----ISEFLDVFPEDLP 2214
            V      +  I +    M+  Q             E  TP L     + +F +VFP++LP
Sbjct: 134  VYKASKKKYPIISAVRAMKALQKGCEGYVLYAMDTEKHTPKLEETSIVKDFPEVFPDELP 193

Query: 2215 GLPPEREVEFAIEVFSGTGPISKAPYRMAPVELAELKKQVQEMLDKGLVRPSTSPWGAPV 2394
            G  P+R++EF I++  G  P +KAPYRMAP EL ELK Q+++ML++ +++PSTSPWGAPV
Sbjct: 194  GNMPDRDIEFEIQLIPGAAPTAKAPYRMAPAELKELKIQLKDMLERNVIQPSTSPWGAPV 253

Query: 2395 LLVKKKDGSQRLCIDYRELNRVTVRNKYPLPRIDDL 2502
            L VKKKDGS R+CIDYR LN +T++NKYPLPRIDDL
Sbjct: 254  LFVKKKDGSLRMCIDYRALNNLTIKNKYPLPRIDDL 289


>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
          Length = 1501

 Score = 1048 bits (2709), Expect = 0.0
 Identities = 494/852 (57%), Positives = 644/852 (75%), Gaps = 6/852 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQL GA+VFSK+DLRSGYHQ+RV   D+ KTAFRTRYGHYEF VMPFG+TNAPA FMDLM
Sbjct: 638  DQLNGASVFSKIDLRSGYHQLRVADKDVPKTAFRTRYGHYEFTVMPFGLTNAPAIFMDLM 697

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            NR F  FLDKFV+VFIDDIL+YS    +H+EHLRI+L+TLR++QLYAK SKCEF L +++
Sbjct: 698  NRIFHEFLDKFVVVFIDDILIYSRNETEHDEHLRIILETLRKNQLYAKFSKCEFRLEKVA 757

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGH +S +G++VD  K++AV +WP P+SV ++RSFLGLAGYYRRFV+DFSKIA  MT L
Sbjct: 758  FLGHFVSKEGVSVDPAKIQAVSEWPTPKSVTDIRSFLGLAGYYRRFVRDFSKIARPMTNL 817

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
             +K   F W E C+ AF  LK RL TAPVLT+PD   GF ++SDAS  GLGCVL Q G+V
Sbjct: 818  MKKETKFEWNEKCEEAFQILKDRLTTAPVLTLPDGNEGFEVYSDASKNGLGCVLQQNGKV 877

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            +AYAS QLK +E NYPTHDLELAA++FALK+WRHYL G   +IFTDHKSLKYIFTQK++N
Sbjct: 878  IAYASCQLKPYEANYPTHDLELAAIVFALKIWRHYLYGATCKIFTDHKSLKYIFTQKDLN 937

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKPTAMFLT--TQRELLDEMRRMDLEVV 3578
            MRQRRWLEL+ D+D+D+QYH G+ N+  DALSRK +    T     EL  +M+R++LE++
Sbjct: 938  MRQRRWLELIKDYDLDIQYHEGKANVVADALSRKSSHSLSTLIVPEELCRDMKRLNLEIL 997

Query: 3579 IPGQ--ACCMPMQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTR 3752
             PG+  A    + +  SI ++I   Q GD  L +++E+ + G   D  IH DGSLRF  R
Sbjct: 998  NPGESEARLSNLSLGVSIFDEIIEGQVGDEHLDKIKEKMKQGKEIDFKIHEDGSLRFKGR 1057

Query: 3753 LCVPRGA--IRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQ 3926
             CVP+    +++ LM E H++PYS+HPGG K+Y+DL+  YWW  MKRE+A +VSKCL CQ
Sbjct: 1058 WCVPQKCNDLKRRLMDEGHNTPYSVHPGGDKLYKDLKVIYWWPNMKREVAEYVSKCLTCQ 1117

Query: 3927 QIKAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPF 4106
            ++K +H+R  G +QPL +P WKW+ I+MDFVT LP+S  G++ IWVIVDRLTKSA F+P 
Sbjct: 1118 KVKIDHKRPMGTVQPLEVPGWKWDSISMDFVTALPKSRSGNDTIWVIVDRLTKSAVFIPI 1177

Query: 4107 RVGQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQ 4286
            +     + LA  Y+  +VRLHGVP+ I+SDRD+RF S +W  +Q +LG+ LK STAFHP 
Sbjct: 1178 KETWKKKQLATTYIKHVVRLHGVPKDIISDRDSRFLSKFWKKVQANLGTTLKMSTAFHPA 1237

Query: 4287 TDGQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCR 4466
            TDGQ+ERT QT+EDMLRAC +DF GSWED L L+EFSYNNS+ ASI+MAPFEALYGRKCR
Sbjct: 1238 TDGQTERTNQTMEDMLRACAIDFQGSWEDQLDLIEFSYNNSYHASIKMAPFEALYGRKCR 1297

Query: 4467 SPVYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVF 4646
            SP+ W+D  E  +LG E I  TV  V  I+  ++ AQDRQ+ +A++ +R  EF VGD VF
Sbjct: 1298 SPICWNDYSENVVLGTEFIEETVKNVRLIQARIQAAQDRQKSYADLKRREDEFAVGDKVF 1357

Query: 4647 LKISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLRKY 4826
            LK+SPT+GV+RFG +GKLS +++GP++I+ER+GKVAYRLALP     +H+VFH+SQL++Y
Sbjct: 1358 LKVSPTKGVMRFGKKGKLSAKYVGPYEILERIGKVAYRLALPMEFEKMHDVFHISQLKRY 1417

Query: 4827 IRDESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDSTWER 5006
            I DE HVL+   ++I   L+   +P+ ILDR  +  +NK + +V+V W+     ++TWE 
Sbjct: 1418 IPDERHVLEPERVQIDSSLTYEERPVKILDRKVRSTRNKDVHIVKVLWSNHESEEATWEA 1477

Query: 5007 EDQMREQYPHLF 5042
            E+ M+++YP LF
Sbjct: 1478 EEDMKKKYPDLF 1489



 Score =  313 bits (802), Expect = 6e-83
 Identities = 215/623 (34%), Positives = 301/623 (48%), Gaps = 32/623 (5%)
 Frame = +1

Query: 730  RLQPATFAGTETPLDADQWLVDMTNLLSAARIPEKDMVEVVKIQLTDIARTWWMTEEERY 909
            +++P  F G   P   + W+ +   L      P    V    + L D A  WW     R 
Sbjct: 38   KVKPPYFKGQADPTFLENWIREFEKLFEVVNCPADMRVGQAVLYLKDEADLWWRENGARL 97

Query: 910  DLAEGEFISWEMFSAAFLVRFFPKSAKKQMEQQFVNLVQGDRSVDAYAAEFIRLSRFAPK 1089
              AEG   +WE F      +F+P   +KQ  Q+F+NL  G  ++  Y ++FI LSRFAP+
Sbjct: 98   SAAEG--FNWEAFVIVLRGKFYPAFMRKQKAQEFINLRMGSMTISEYYSKFIALSRFAPE 155

Query: 1090 LVMDEEDRADRFQQGLRLEIQMQQSSQELETYDQVLTAA-----------RKAELLIQKK 1236
            +V  EE +A RF+QGL  EIQ+    +   + D V   A           +KA ++ +K+
Sbjct: 156  VVATEELKAQRFEQGLTDEIQLGLGGETFTSLDVVYGRASHIYGLQSRRDKKAGIVGEKR 215

Query: 1237 AASGYHGQQKRPYGQMTSVAQPSQRAAQIPRSTXXXXXXXXXXXXXXCSFCQRTGHLKKD 1416
                  G Q               R  Q  RS               C FC +  H  KD
Sbjct: 216  KEVSTGGNQNNFKKNRNGNGNFQGRNNQDNRSQGRPERVHI------CKFCDKN-HPGKD 268

Query: 1417 CHRANGACLACGSMDHKIAQCPNGRRHLETGATAPGQIRXXXXXXXXXXXXXXIQTRPPA 1596
            C      C  C    H+  +C     + + G     +I+               Q   P 
Sbjct: 269  CKGELVTCHYCQKKGHREYEC-----YTKHGKGL--KIQGNGNQARPGSNQIGNQGPKPG 321

Query: 1597 GQVQ----ARPAYPPQSVAFXXXXXXXXXXXAAFTLTAEQAEVAGDVVTGTISVYSQPAF 1764
            GQ      +RPA    S                F ++  +AE + DVVTG  S+ S    
Sbjct: 322  GQNNQGNHSRPAANDNSAQ-------NKPAGKVFVMSHNEAERSADVVTGNFSINSVFVK 374

Query: 1765 ALFDSGASRCFVSARFV-SMHSIPYISLDVFWTISTGNGSVSCGKECRDCLIVVGDHSFL 1941
             LFDSGA+  F+S   + S+  + + S+D+  +I TG   V C K  ++  + +G   F 
Sbjct: 375  TLFDSGATYSFISPSVLKSLGLVEHESIDLSVSIPTGE-VVKCTKLFKNLPLKIGGSVFP 433

Query: 1942 ADLLVIDNCEFDVILGMDWLSGCHAMIDCRRRAVVFRMP----------GLPE-FEFIGD 2088
            ++L+  +  + DVILGM+WLS   A IDC  + VV R P          G P+ F  I  
Sbjct: 434  SELIEFNLGDLDVILGMNWLSLYKARIDCEVQKVVLRNPSGKFTSYRRFGKPKNFGVISA 493

Query: 2089 VSPHQSDRVSIRARFMMMEEQQESVT-----PALISEFLDVFPEDLPGLPPEREVEFAIE 2253
            +   +  R      F  +++  +         ++++EF+DVFP ++ G+PP R VEF I+
Sbjct: 494  LQVQKLMRKGCELFFCSVQDVSKEAELKLEDVSIVNEFMDVFPSEISGMPPARAVEFTID 553

Query: 2254 VFSGTGPISKAPYRMAPVELAELKKQVQEMLDKGLVRPSTSPWGAPVLLVKKKDGSQRLC 2433
            +  GT PISKAPYRMAP E++ELK Q+QE+LDKG +RPS SPWGAPVL VKKKDGS RLC
Sbjct: 554  LVPGTAPISKAPYRMAPPEMSELKTQLQELLDKGYIRPSASPWGAPVLFVKKKDGSMRLC 613

Query: 2434 IDYRELNRVTVRNKYPLPRIDDL 2502
            IDYRELN VT++NKYPLPRIDDL
Sbjct: 614  IDYRELNNVTIKNKYPLPRIDDL 636


>emb|CAA73042.1| polyprotein, partial [Ananas comosus]
          Length = 871

 Score = 1047 bits (2707), Expect = 0.0
 Identities = 490/777 (63%), Positives = 623/777 (80%), Gaps = 5/777 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQL+G+ V+SK+DL+SGYHQ+++K  D+ KTAFRTRYGHYEF VMPFG+TNAP  FMDLM
Sbjct: 95   DQLQGSCVYSKIDLQSGYHQLKIKPEDVSKTAFRTRYGHYEFAVMPFGLTNAPTAFMDLM 154

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            NR F P+LD+FV+VFIDDILVYS +   HEEHLRIVLQ LRE +LY KL KCEF+L +++
Sbjct: 155  NRVFKPYLDRFVVVFIDDILVYSRSDADHEEHLRIVLQVLREKELYVKLKKCEFWLREVA 214

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGH+IS  GIAVD KK+EA++DWP   SV E+RSFLGLAGYYRRFV+ F+K++  +T+L
Sbjct: 215  FLGHLISGSGIAVDPKKIEAIKDWPRLTSVTEIRSFLGLAGYYRRFVERFAKLSTPLTRL 274

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
            T K   F+W +AC+ +F ELKQRL TAP+LT+P    G+ ++SDAS  GLGCVL Q  +V
Sbjct: 275  THKGVKFIWNDACERSFQELKQRLTTAPILTLPVAGAGYVVYSDASLNGLGCVLMQDDKV 334

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            +AYASRQLK +E+NYPTHDLELAAV+FALKLWRHYL GER E++TDHKSLKY+FTQKE+N
Sbjct: 335  IAYASRQLKEYEKNYPTHDLELAAVVFALKLWRHYLYGERCEVYTDHKSLKYLFTQKELN 394

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKPT---AMFLTTQRELLDEMRRMDLEV 3575
            +RQRRWLEL+ D+D+ + YHPG+ N+  DALSRK     AM + TQ  L+++M+R++LE+
Sbjct: 395  LRQRRWLELLKDYDLTILYHPGKANVVADALSRKSMENLAMHVVTQPRLIEQMKRLELEI 454

Query: 3576 VIPGQAC-CMPMQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTR 3752
            V P      M + ++ +++++IK  QA D +LQ+++ +   G   D  +  DG +RF  R
Sbjct: 455  VTPDTPMRLMTLVVQPTLLDRIKEKQASDVELQKIKGKMVDGCTGDFTLDGDGLMRFRGR 514

Query: 3753 LCVPRGA-IRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQQ 3929
            +CVP  + I+++++ EAH +PY+IHPGGTKMY+DL+  YWW G+K+++  FV+KCL CQQ
Sbjct: 515  ICVPADSGIKEDILQEAHRAPYAIHPGGTKMYKDLKLLYWWPGIKKDVGEFVAKCLTCQQ 574

Query: 3930 IKAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPFR 4109
            +KAEH+  AG LQ LPIP WKWEKITMDFVTGLPRS  GH+AIWVIVDRLTKSAHF+P  
Sbjct: 575  VKAEHRVPAGKLQSLPIPVWKWEKITMDFVTGLPRSQAGHDAIWVIVDRLTKSAHFIPIH 634

Query: 4110 VGQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQT 4289
               + E LA +Y+ EIVRLHGVP SIVSDRDTRF SH+W SLQ++LG+RL +STAFHPQ+
Sbjct: 635  TTWTGERLAQVYLDEIVRLHGVPTSIVSDRDTRFVSHFWRSLQDALGTRLDFSTAFHPQS 694

Query: 4290 DGQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCRS 4469
            DGQSERTIQTLEDMLRACV+DF G W  HL + EF+YNNS+QASI+MAPFEALYGRKCRS
Sbjct: 695  DGQSERTIQTLEDMLRACVIDFQGGWSQHLPMAEFAYNNSYQASIKMAPFEALYGRKCRS 754

Query: 4470 PVYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVFL 4649
            P++W ++GE   LGP+++      V   R+ + TAQ RQ+ +A+  +R LEF+VGDHVFL
Sbjct: 755  PLHWSEVGESLALGPDVLQEAEVKVRIARERLLTAQSRQRSYADRRRRDLEFQVGDHVFL 814

Query: 4650 KISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLR 4820
            K+SPTRG+ RFG RGKLSPRFIGP++I+ERVG VAYRLALPP L+GVHNVFHVS +R
Sbjct: 815  KVSPTRGIKRFGIRGKLSPRFIGPYEILERVGPVAYRLALPPNLSGVHNVFHVSVVR 871



 Score =  152 bits (383), Expect = 2e-33
 Identities = 68/92 (73%), Positives = 81/92 (88%)
 Frame = +1

Query: 2227 EREVEFAIEVFSGTGPISKAPYRMAPVELAELKKQVQEMLDKGLVRPSTSPWGAPVLLVK 2406
            +RE+EF I++  GT PISKAPYRMAP EL EL+ Q+Q++LDKG +RPS SPWGAPVL VK
Sbjct: 2    DREIEFVIDLVPGTTPISKAPYRMAPAELRELRAQLQDLLDKGFIRPSVSPWGAPVLFVK 61

Query: 2407 KKDGSQRLCIDYRELNRVTVRNKYPLPRIDDL 2502
            KKDGS RLC+DYRELN+VT++NKYPLPRIDDL
Sbjct: 62   KKDGSLRLCVDYRELNKVTIKNKYPLPRIDDL 93


>gb|PNY00884.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 1072

 Score = 1045 bits (2702), Expect = 0.0
 Identities = 500/854 (58%), Positives = 655/854 (76%), Gaps = 7/854 (0%)
 Frame = +3

Query: 2502 VDQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDL 2681
            +DQL+GATVFSK+DLRSGYHQ+R+++SD+ KTAFRTRYGHYEFLVMPFGVTNAPA FMD 
Sbjct: 227  LDQLRGATVFSKIDLRSGYHQIRIRSSDVSKTAFRTRYGHYEFLVMPFGVTNAPAIFMDY 286

Query: 2682 MNRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQI 2861
            MNR F P+LDKFV++FIDDIL+YS   ++H EHLRIVL+ LRE +LYAK SKCEF+LS++
Sbjct: 287  MNRIFQPYLDKFVVIFIDDILIYSKDSQEHAEHLRIVLEILREKKLYAKFSKCEFWLSEV 346

Query: 2862 SFLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTK 3041
             FLGHVIS  G++VD  KVEAV +W  PRSV EVRSFLGLAGYYRRF+K FS+IA  +T+
Sbjct: 347  KFLGHVISQGGVSVDQSKVEAVLNWERPRSVTEVRSFLGLAGYYRRFIKSFSQIALPLTR 406

Query: 3042 LTRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGR 3221
            LTRK+ PFVW E C+ +F  LK+ L  APVLTIPD    + +  DAS KGLGCVL Q  R
Sbjct: 407  LTRKDTPFVWNEECERSFRRLKEMLTQAPVLTIPDPTKSYVVFCDASAKGLGCVLMQDDR 466

Query: 3222 VVAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEI 3401
            VVAYASRQLK HE NYPTHDLELAA+IFALK+WRH+L G   ++F+DHKSLKY+F QKE+
Sbjct: 467  VVAYASRQLKTHEENYPTHDLELAAIIFALKIWRHHLYGVHFDLFSDHKSLKYLFDQKEL 526

Query: 3402 NMRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKP--TAMFLTTQRELLDEMRRMDLEV 3575
            NMRQRRW+E + DFD +L+YHPG+ N+  DALSRK    +  +  +  L++  R ++L V
Sbjct: 527  NMRQRRWMEYLKDFDFELKYHPGKANVVADALSRKALHASELMMHKCRLIESFRNLNLNV 586

Query: 3576 V-IPGQACCMPMQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTR 3752
            + + G       ++   +   I  +Q  D  LQ    + E        + ADG++ +  R
Sbjct: 587  MDVEGGLLMNKYEMSCDLRSMIVQAQISDPDLQRRIGKPE------FSVSADGAILYEGR 640

Query: 3753 LCVPRGA-IRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQQ 3929
            LCVP    ++Q +++EAH S +SIHPG TKMY DL++ YWW GMK EIA FV++C++CQQ
Sbjct: 641  LCVPNDTELKQLILSEAHKSGFSIHPGSTKMYHDLKKDYWWPGMKTEIAEFVARCIVCQQ 700

Query: 3930 IKAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPFR 4109
            +K EHQ+ AGLLQPL IP+WKWE+ITMDFV+GLPR+ +GH++IWVIVDRLTKSAHF+  +
Sbjct: 701  VKIEHQKPAGLLQPLEIPQWKWEQITMDFVSGLPRTKKGHDSIWVIVDRLTKSAHFIAVK 760

Query: 4110 VGQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQT 4289
                    A++++ +IV+LHGVP SIVSDRD RFTS +W + QE++G+RLK ST+ HPQT
Sbjct: 761  TTYKAPKYAELFISKIVKLHGVPLSIVSDRDARFTSRFWKAFQEAMGTRLKMSTSHHPQT 820

Query: 4290 DGQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCRS 4469
            DGQSERTIQTLEDMLRACVL+ GGSW ++LHL+EF+YNNS+ +SI MAP+EALYGRKCR+
Sbjct: 821  DGQSERTIQTLEDMLRACVLEDGGSWGNYLHLIEFAYNNSYHSSIGMAPYEALYGRKCRT 880

Query: 4470 PVYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVFL 4649
            P+ W ++GE+ +LGP+++  T   ++ I++ MKTAQ RQ+ +A+  +R++EF+ GDHVFL
Sbjct: 881  PLCWAEVGEKGILGPDMVQETTLKIKSIQEKMKTAQSRQKSYADKGRRSVEFKEGDHVFL 940

Query: 4650 KISP---TRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLR 4820
            K++P    RGV  F T+ KL PR+IGPF IIERVG+VAYRLALPPA++G+H+VFHVSQLR
Sbjct: 941  KVTPMLRLRGV--FKTK-KLCPRYIGPFQIIERVGEVAYRLALPPAMSGLHDVFHVSQLR 997

Query: 4821 KYIRDESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDSTW 5000
            K++ D    +D   ++++ DL+   QP+ I+ R  K +++KTI +V+V W     G++TW
Sbjct: 998  KFVPDPFTTVDLDTVDLKSDLTFQPQPVHIIGRDVKALRSKTIPIVKVLWEGSPDGEATW 1057

Query: 5001 EREDQMREQYPHLF 5042
            E E +MR+QYPHLF
Sbjct: 1058 ELESEMRKQYPHLF 1071



 Score =  202 bits (515), Expect = 6e-49
 Identities = 106/229 (46%), Positives = 146/229 (63%), Gaps = 13/229 (5%)
 Frame = +1

Query: 1858 TISTGNGSVSCGKECRDCLIVVGDHSFLADLLVIDNCEFDVILGMDWLSGCHAMIDCRRR 2037
            +++TG G V   + C+ C I V   ++  DL+ +   + DVILGMDWLS     I C  +
Sbjct: 4    SVATG-GRVISKRVCQSCPITVTGKTYFVDLICLPISDLDVILGMDWLSANSVYIGCAEK 62

Query: 2038 AVVFRMPGLPEFEFIGDVSPHQSDRVSIRARFMMMEEQQE----SVTPA---------LI 2178
            ++        E   +  +  +    V    +++  E +      +VTP          ++
Sbjct: 63   SIYMPTENTAEGVALSTLLQNTHQMV----QYLFAENKNFCILFTVTPEPVLSPSNIPIV 118

Query: 2179 SEFLDVFPEDLPGLPPEREVEFAIEVFSGTGPISKAPYRMAPVELAELKKQVQEMLDKGL 2358
            +EFLDVFP+D+  LPPERE+EF+I++  G  PIS APYRM+PVEL ELK Q++E+L K  
Sbjct: 119  NEFLDVFPDDITNLPPEREIEFSIDLLPGAQPISVAPYRMSPVELRELKNQLEELLRKHF 178

Query: 2359 VRPSTSPWGAPVLLVKKKDGSQRLCIDYRELNRVTVRNKYPLPRIDDLL 2505
            +RPS SPWGAPVLLVKKKDG+ RLCIDYR+LN+VT++NKYPLPRIDDLL
Sbjct: 179  IRPSVSPWGAPVLLVKKKDGTMRLCIDYRQLNKVTIKNKYPLPRIDDLL 227


>ref|XP_019106882.1| PREDICTED: uncharacterized protein LOC109135779 [Beta vulgaris subsp.
            vulgaris]
          Length = 1826

 Score = 1042 bits (2694), Expect = 0.0
 Identities = 481/853 (56%), Positives = 658/853 (77%), Gaps = 6/853 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQL+GA +FSK+DLRSGYHQ++++  DI  TAFRTRYGHYEF VMPFG+TNAPA FMDLM
Sbjct: 974  DQLRGAGIFSKIDLRSGYHQLQIREKDIPTTAFRTRYGHYEFTVMPFGLTNAPAMFMDLM 1033

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            NR F  +LDKFV+VFIDDIL+YS   E+HEEHLR VL TLRE+QLYAK SKCEF++ +++
Sbjct: 1034 NRVFREYLDKFVVVFIDDILIYSKNKEEHEEHLRSVLSTLRENQLYAKFSKCEFWMEEVA 1093

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGH++S +GI+VD  K+ AV +WP PR+V ++RSFLGLAGYYRRFVKDFS++A+ MT L
Sbjct: 1094 FLGHIVSKKGISVDPSKITAVSEWPKPRNVTDIRSFLGLAGYYRRFVKDFSRVAKPMTSL 1153

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
             +K+  F+WTE C+ AF +LK+ L TAP+LT+P++     ++SDAS  GLGCVL Q  +V
Sbjct: 1154 MKKDTKFIWTEECEKAFKKLKELLTTAPILTLPEENAELEVYSDASKNGLGCVLMQNRKV 1213

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            +AYASRQLK +E NYPTHDLELAA++FALK+WRHYL G +V+++TDHKSLKY++TQK++N
Sbjct: 1214 IAYASRQLKPYEVNYPTHDLELAAIVFALKIWRHYLYGVKVKLYTDHKSLKYLYTQKDLN 1273

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKPTAMF--LTTQRELLDEMRRMDLEVV 3578
            MRQRRWLEL+ D+DI++ YH G+ N+  DALSRK +     L    +L DE R++++EVV
Sbjct: 1274 MRQRRWLELVNDYDIEILYHEGKANVVADALSRKSSHSLSTLVLPEKLCDEFRKLNIEVV 1333

Query: 3579 IPG--QACCMPMQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTR 3752
                 +AC   + I+S + E+I  +Q G+ +++++++  E     +  IH DGS+RF  R
Sbjct: 1334 GSSGVEACLNAISIQSELNEEILKAQEGNEEMEKIKKLIEEKKTKEFSIHDDGSVRFNGR 1393

Query: 3753 LCVPRGA--IRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQ 3926
             C+P     +++++M E H++ YSIHPGG K+Y+DL+  +WW+ MKRE+A FV++CL CQ
Sbjct: 1394 WCIPSSCTELKEKVMKEGHNTTYSIHPGGDKLYKDLKLMFWWNNMKREVAEFVARCLTCQ 1453

Query: 3927 QIKAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPF 4106
            ++K+EH+R  G +QPLP+PEWKW+ I MDFV GLP++ +G   +WVIVDRLTK A F+P 
Sbjct: 1454 KVKSEHKRPQGTIQPLPVPEWKWDDIAMDFVVGLPKTAKGFTKVWVIVDRLTKVAKFVPM 1513

Query: 4107 RVGQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQ 4286
            +   S E    +Y+ ++VR HGVP +IVSDRD+RF SH+W +LQ++ G+ +  STAFHP 
Sbjct: 1514 KDNWSMEQCGKVYVDQVVRHHGVPSTIVSDRDSRFLSHFWEALQKAFGTDVLKSTAFHPA 1573

Query: 4287 TDGQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCR 4466
            TDGQSERTIQTLEDMLRAC LD+  +W++ L L+EFSYNNS+ +SI+MAPFEALYGRKCR
Sbjct: 1574 TDGQSERTIQTLEDMLRACALDYPKTWDEMLALIEFSYNNSYHSSIKMAPFEALYGRKCR 1633

Query: 4467 SPVYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVF 4646
            SP+ W+DI E   LGP++I  TV  V  IR+ M+ AQDRQ+ +A+ ++R  E++VG+ V 
Sbjct: 1634 SPLCWNDISETVTLGPQMIEDTVNQVRYIREKMRAAQDRQKAYADQNRRDSEYQVGEKVL 1693

Query: 4647 LKISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLRKY 4826
            LK+SP +GV+RFG +GKLSP+FIGP+DIIER+G++AYRL LP  L  VHNVFHVSQL++Y
Sbjct: 1694 LKVSPMKGVMRFGQKGKLSPKFIGPYDIIERIGRLAYRLDLPNNLGKVHNVFHVSQLKRY 1753

Query: 4827 IRDESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDSTWER 5006
            + D+SHVLD   +E+   LS   +P+ ILD   +  +NK I++++V W+ Q   ++TWE 
Sbjct: 1754 VPDKSHVLDPEIIEVDETLSFEERPVKILDSKVRSTRNKDIKILKVLWSNQRTEEATWEA 1813

Query: 5007 EDQMREQYPHLFE 5045
            ED+MR++YP LF+
Sbjct: 1814 EDEMRKKYPELFD 1826



 Score =  300 bits (767), Expect = 2e-78
 Identities = 200/641 (31%), Positives = 304/641 (47%), Gaps = 40/641 (6%)
 Frame = +1

Query: 700  AKPGNVSDFRRL---QPATFAGTETPLDADQWLVDMTNLLSAARIPEKDMVEVVKIQLTD 870
            +K  +V  F+R+   +P ++ G   P+  + W+ D   L  A + P+   V +    L +
Sbjct: 348  SKKKSVDWFKRVSDSKPPSYDGKGDPVKLENWVRDFEKLFDAIQCPDNRKVAIAAYYLKE 407

Query: 871  IARTWWMTEEERYDLAEGEFISWEMFSAAFLVRFFPKSAKKQMEQQFVNLVQGDRSVDAY 1050
             A  WW   +E   +A  +F  W+ F  A   +F+P   ++Q   +F  L QGD +V+ Y
Sbjct: 408  EADFWWSQHKETL-MARPDF-DWKAFGVAMKEKFYPNFLRRQKATEFDELKQGDMTVEQY 465

Query: 1051 AAEFIRLSRFAPKLVMDEEDRADRFQQGLRLEIQMQQSSQELETYDQVLTAARKAELLIQ 1230
              +F+ L +FAP+LV  EE +A RF+ GL LE+++        T ++V   A      ++
Sbjct: 466  YEKFVGLMKFAPELVPTEERKAIRFETGLSLEVKLGLGGSTFRTLEEVYDRAAHLGSYLK 525

Query: 1231 KKAASGYHGQQK--------------RPYGQMTSVAQPS--QRAAQIPRSTXXXXXXXXX 1362
            +      + ++K              +P        Q S  +   Q              
Sbjct: 526  QAGVESSNNKRKENPSQNFQRNDKKFKPQNNFHQGGQSSGQRNGGQYQPQKGGNGSNKGK 585

Query: 1363 XXXXXCSFCQRT--GHLKKDCHRANGACLACGSMDHKIAQCPNGRRHLETGATAPGQIRX 1536
                   FC+R    H  KDC      C  C  + H+  +C +    L+T     G    
Sbjct: 586  KGDERVYFCKRCPYNHPGKDCEGKLVECNYCHKLGHREYECFSKNLELKTDKGKSGNQFG 645

Query: 1537 XXXXXXXXXXXXXIQTRPPAGQVQARPAYPPQSVAFXXXXXXXXXXXAAFTLTAEQAEVA 1716
                            R             P   A                ++A +AE +
Sbjct: 646  QGNRNQSGGNNYQGGNRQNGNNKTVLSGAGPSVPAVARLN----------VISAREAETS 695

Query: 1717 GDVVTGTISVYSQPAFALFDSGASRCFVSARFVSMHSIPYI-SLDVFWTISTGNGSVSCG 1893
             DVV G +S+ S    ALFDSGA R FVS   VS + +  + ++++   + +G   V+C 
Sbjct: 696  KDVVMGNVSINSTFVKALFDSGAERSFVSKLVVSKYGLGNLRNVEIPIMLPSGE-VVTCS 754

Query: 1894 KECRDCLIVVGDHSFLADLLVIDNCEFDVILGMDWLSGCHAMIDCRRRAVVFRMPGLPEF 2073
            +   + L+ +GD  F  +L+     + ++ILGMDWL    A I C  + V  R     + 
Sbjct: 755  RVYENVLVRIGDVDFETNLIEFPLEDLEIILGMDWLKEYKAEILCGEQKVRLRNKNGKKV 814

Query: 2074 EFIGDVSPHQSDRVSIRARFMMMEEQQESVTPAL------------------ISEFLDVF 2199
             F    +  Q  R+ I +   ++++  +  +  L                  ++EF DVF
Sbjct: 815  TF---KTKPQEGRIKIISALSLVKQVSKGASLFLCSVQRLEEDKLKIEHVKVVNEFPDVF 871

Query: 2200 PEDLPGLPPEREVEFAIEVFSGTGPISKAPYRMAPVELAELKKQVQEMLDKGLVRPSTSP 2379
            PED+PG+PP+RE+EF I++  GT PISKAPYRMAP E+ EL KQ++E+L+KG +RPS SP
Sbjct: 872  PEDIPGMPPKRELEFTIDLVPGTAPISKAPYRMAPAEMKELNKQLEELLEKGYIRPSYSP 931

Query: 2380 WGAPVLLVKKKDGSQRLCIDYRELNRVTVRNKYPLPRIDDL 2502
            WGAPVL VKKKDGS RLCIDYR+LN+VT++NKYPLPRIDDL
Sbjct: 932  WGAPVLFVKKKDGSLRLCIDYRDLNKVTIKNKYPLPRIDDL 972


>gb|PRQ45918.1| putative nucleotidyltransferase, Ribonuclease H [Rosa chinensis]
          Length = 815

 Score = 1039 bits (2686), Expect = 0.0
 Identities = 496/814 (60%), Positives = 634/814 (77%), Gaps = 12/814 (1%)
 Frame = +3

Query: 2637 MPFGVTNAPATFMDLMNRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQ 2816
            MPFG+TNAPA FMDLMNR F P+LD+FVIVFIDDILVYS    QH +HLRIVL+TLRE Q
Sbjct: 1    MPFGLTNAPAAFMDLMNRVFCPYLDRFVIVFIDDILVYSKDNSQHAKHLRIVLRTLREAQ 60

Query: 2817 LYAKLSKCEFYLSQISFLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYR 2996
            LYAK +KCEF+L+ I FLGHV+S++GI+VD +KV AV +W  P +V E+RSFLGLAGYYR
Sbjct: 61   LYAKFNKCEFWLNSIGFLGHVVSAEGISVDPQKVVAVLNWERPTTVTEIRSFLGLAGYYR 120

Query: 2997 RFVKDFSKIAESMTKLTRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSD 3176
            RFV+DFSKIA  +T+LTRK   FVW+E C+ +F ELK RL +APVL +PD  G + ++SD
Sbjct: 121  RFVQDFSKIATPLTRLTRKGVKFVWSEECEQSFQELKGRLTSAPVLVLPDDSGEYVVYSD 180

Query: 3177 ASGKGLGCVLSQRGRVVAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIF 3356
            AS +GLGCVL Q G V+AYASRQLK HE NYPTHDLELAAV+ ALKLWRHYL G R +IF
Sbjct: 181  ASRQGLGCVLMQHGNVIAYASRQLKPHELNYPTHDLELAAVVLALKLWRHYLYGARCQIF 240

Query: 3357 TDHKSLKYIFTQKEINMRQRRWLELMADFDIDLQYHPGRQNLAPDALSRK--------PT 3512
            TDHKSL+Y+ TQKEIN+RQRRWLEL+ D+D  ++YHPGR N+  DALSRK        P+
Sbjct: 241  TDHKSLQYLLTQKEINLRQRRWLELIKDYDCTIEYHPGRANVVADALSRKTYPSLLPSPS 300

Query: 3513 AMFLTTQR-ELLDEMRR--MDLEVVIPGQACCMPMQIRSSIVEQIKGSQAGDAKLQELRE 3683
               + T R  LL E+R   + LE      A      +R  ++++++ +Q  D  LQE+RE
Sbjct: 301  LSHMRTVRVPLLYELRATGVSLEGTDEFAALIASFHVRPILIDKVREAQLHDEALQEVRE 360

Query: 3684 QAEAGLRTDIVIHADGSLRFGTRLCVPR-GAIRQELMAEAHSSPYSIHPGGTKMYRDLRQ 3860
              E G R D ++  DG+L FG R+CVP+   ++QE++ EAHSSPY++HPGGTKMYR L++
Sbjct: 361  AVENGAREDFIVRGDGALMFGNRICVPKQDDLKQEILEEAHSSPYAMHPGGTKMYRTLKE 420

Query: 3861 HYWWHGMKREIARFVSKCLICQQIKAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSP 4040
            +YWW  MKREIA +V +CL+CQQ+KAE Q+ +GLLQPLPIPEWKWE ITMDFV+GLPRS 
Sbjct: 421  YYWWSNMKREIADYVRRCLVCQQVKAERQKPSGLLQPLPIPEWKWEHITMDFVSGLPRSR 480

Query: 4041 RGHNAIWVIVDRLTKSAHFLPFRVGQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSH 4220
             GH++IWVIVDRLTKSAHFLP       +  A++Y++EIVRLHG P SI SDRD RFTS 
Sbjct: 481  NGHDSIWVIVDRLTKSAHFLPVSKTYKMDKYAELYLNEIVRLHGTPVSITSDRDPRFTSK 540

Query: 4221 YWTSLQESLGSRLKYSTAFHPQTDGQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSY 4400
            +W+ L E+LG++ ++STAFHPQTDGQ+ERTIQTLEDMLRACVL F G+W++H+ L+EF+Y
Sbjct: 541  FWSELMEALGTQSQFSTAFHPQTDGQTERTIQTLEDMLRACVLQFKGNWDNHVALIEFAY 600

Query: 4401 NNSFQASIEMAPFEALYGRKCRSPVYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQD 4580
            NNS+ +SI MAP+EALYG++CR+P+ W++ GERKL+GPEL+  T   V  I++ +KTAQ 
Sbjct: 601  NNSYHSSIGMAPYEALYGKQCRTPLCWNEAGERKLIGPELVRVTTEKVNLIKEKLKTAQS 660

Query: 4581 RQQKWANIHKRALEFEVGDHVFLKISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYR 4760
            RQ+ +A+  ++ LEF+VGD VFLK+SP +G+IRFG RGKLSPR+IGP++I ER+G VAYR
Sbjct: 661  RQKSYADNRRKDLEFQVGDWVFLKLSPWKGIIRFGKRGKLSPRYIGPYEITERIGAVAYR 720

Query: 4761 LALPPALAGVHNVFHVSQLRKYIRDESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKN 4940
            LALPP L+ VH+VFHVS LRKYI D SHVL    + +R +L+   QP+ ILDR E++++N
Sbjct: 721  LALPPRLSRVHDVFHVSMLRKYIADSSHVLQEQPIRLRENLTYEEQPVQILDRREQILRN 780

Query: 4941 KTIRLVRVQWNPQSPGDSTWEREDQMREQYPHLF 5042
            KTI LV+V W+     ++TWE E+QMR+QYPHLF
Sbjct: 781  KTIPLVKVLWSNHMVEEATWEPEEQMRKQYPHLF 814


>gb|PKU71866.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1184

 Score = 1036 bits (2680), Expect = 0.0
 Identities = 499/850 (58%), Positives = 642/850 (75%), Gaps = 4/850 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQL G++VFSK+DLRSGY+QV+VK +D+ KTAF TRYGHYEFLVMPFGVTNAPA FMDLM
Sbjct: 335  DQLSGSSVFSKIDLRSGYYQVKVKEADVVKTAFSTRYGHYEFLVMPFGVTNAPAIFMDLM 394

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            NR F  +LD+FVIVFIDDILVYSA+ ++H  HLRIVL+TLR HQLYAK SKCEF+L  IS
Sbjct: 395  NRVFREYLDQFVIVFIDDILVYSASEDEHARHLRIVLETLRRHQLYAKFSKCEFWLKSIS 454

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGHVIS +GI+VD +K++AV DWP P +V EVRSFLG+AGYYR+FVK FS+I+  +T+L
Sbjct: 455  FLGHVISGKGISVDPQKIQAVADWPRPTTVFEVRSFLGMAGYYRKFVKGFSQISTPLTRL 514

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
            T+K+ PFVWT  C+ +F  LK+ L +APVL +P    GF + SDAS KGLGCVL Q G+V
Sbjct: 515  TQKSVPFVWTPECEASFQRLKECLTSAPVLALPSGTEGFQVFSDASLKGLGCVLMQHGQV 574

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            ++YASRQLK HE+NYPTHDLELAAV+FALK+WRHYL G R EIFTDHKSLKYIFTQK++N
Sbjct: 575  ISYASRQLKPHEKNYPTHDLELAAVVFALKIWRHYLYGVRCEIFTDHKSLKYIFTQKDLN 634

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKPTAMF---LTTQRELLDEMRRMDLEV 3575
            +RQRRWLEL+ D+D+ +QY PG+ N+  DALSRK + +    LT    L+ +M R+ LEV
Sbjct: 635  LRQRRWLELIKDYDLTIQYQPGKANVVADALSRKSSGLSGIQLTCDDFLIRDMERLQLEV 694

Query: 3576 VIPGQACCMPMQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTRL 3755
            +         M IRS++  +I+ +Q  D+   +L  Q  +G   ++ I   G++    RL
Sbjct: 695  ISSSGLELAQMSIRSTLETRIQEAQKSDSDYSKLIAQIGSGKTPELRISDSGAIFCKNRL 754

Query: 3756 CVPR-GAIRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQQI 3932
             VP  G +RQE++ E+H S Y+IHPG  KMY D++  +WW GMK+++A FVS+C  CQ +
Sbjct: 755  WVPVFGDLRQEILYESHHSGYTIHPGSGKMYADMKLLFWWPGMKKDVAEFVSRCEACQLV 814

Query: 3933 KAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPFRV 4112
            KAEHQR  GLLQ LPIPEWKWE++TMDF  G PRS +GH+AIWV+VDRLTKSAHFLP R 
Sbjct: 815  KAEHQRPGGLLQSLPIPEWKWEEVTMDFAMGFPRSRQGHDAIWVVVDRLTKSAHFLPIRQ 874

Query: 4113 GQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQTD 4292
              S + LA +Y+ EIVRLHGVP  IVSDRD RFTS  W  +Q+ LG++L +STAFHPQTD
Sbjct: 875  TDSVDRLAQIYVKEIVRLHGVPRVIVSDRDGRFTSRLWKGIQQGLGTKLHFSTAFHPQTD 934

Query: 4293 GQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCRSP 4472
            GQSERTIQ LED+LR CVLDF GSWEDH+ L+EF+YNNSFQ+SI MAP+EALYGRKCR+P
Sbjct: 935  GQSERTIQVLEDLLRLCVLDFSGSWEDHIPLIEFAYNNSFQSSIGMAPYEALYGRKCRTP 994

Query: 4473 VYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVFLK 4652
            +   ++G+R+ LG      T   +  IR+ +K AQDRQQK+ N   R +EF+VGD V++K
Sbjct: 995  LTLTEVGDRQALGATFADETAQKINLIRERLKAAQDRQQKYYNQKHRFVEFQVGDFVYVK 1054

Query: 4653 ISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLRKYIR 4832
            +SP +GV RFG   KLSPR++GPF+I+ER+GK AY+L L  ++  VHNVFHVS LRK++ 
Sbjct: 1055 VSPMKGVSRFGQVSKLSPRYVGPFEILERIGKAAYKLMLSDSMPDVHNVFHVSTLRKWVS 1114

Query: 4833 DESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDSTWERED 5012
            D    +   E+EI+ +L+   +P  IL    + +++K I +V+VQW  ++  ++TWE+E 
Sbjct: 1115 DSGKKVSADEVEIQENLTYKEEPELILAYDVRKLRSKQIPMVKVQWKHRTAREATWEKES 1174

Query: 5013 QMREQYPHLF 5042
             MR  YP+LF
Sbjct: 1175 DMRRLYPYLF 1184



 Score =  237 bits (604), Expect = 2e-59
 Identities = 128/273 (46%), Positives = 176/273 (64%)
 Frame = +1

Query: 1684 FTLTAEQAEVAGDVVTGTISVYSQPAFALFDSGASRCFVSARFVSMHSIPYISLDVFWTI 1863
            ++L+ ++A  A DVVTGT+ +  QP   LFDSGAS  F+S     +  +  + L +  ++
Sbjct: 72   YSLSQQEARDAPDVVTGTVYISDQPCRVLFDSGASHSFLSEHCFEILHLDSMVLPISLSV 131

Query: 1864 STGNGSVSCGKECRDCLIVVGDHSFLADLLVIDNCEFDVILGMDWLSGCHAMIDCRRRAV 2043
                G+    ++   C I +    + + L+ +    +DVILGMDWLS   A IDC ++ V
Sbjct: 132  ILPAGNPLIARQFCLCEIEISGKKWKSSLIRLPISSYDVILGMDWLSQYEAQIDCLKKQV 191

Query: 2044 VFRMPGLPEFEFIGDVSPHQSDRVSIRARFMMMEEQQESVTPALISEFLDVFPEDLPGLP 2223
               + G        +    Q  R S+R   + +E    S  P ++ EF DVFPE+L GLP
Sbjct: 192  SLLVAG--------ERVVFQGLRASVRD--LNLEVGSVSEIP-VVREFADVFPEELVGLP 240

Query: 2224 PEREVEFAIEVFSGTGPISKAPYRMAPVELAELKKQVQEMLDKGLVRPSTSPWGAPVLLV 2403
            P+R+VEF+I+VF GT PISKAPYRMAP EL+EL  Q+QE++D+G VRPS SPWGAPVL V
Sbjct: 241  PDRDVEFSIDVFPGTAPISKAPYRMAPKELSELNFQLQELVDRGFVRPSVSPWGAPVLFV 300

Query: 2404 KKKDGSQRLCIDYRELNRVTVRNKYPLPRIDDL 2502
            KKKDG+ R+CIDYR+LN+VT++NKYPLPRIDDL
Sbjct: 301  KKKDGTLRMCIDYRDLNKVTIKNKYPLPRIDDL 333


>gb|PKU79799.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 1184

 Score = 1036 bits (2678), Expect = 0.0
 Identities = 499/850 (58%), Positives = 641/850 (75%), Gaps = 4/850 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQL G++VFSK+DLRSGY+QV+VK +D+ KTAF TRYGHYEFLVMPFGVTNAPA FMDLM
Sbjct: 335  DQLSGSSVFSKIDLRSGYYQVKVKEADVVKTAFSTRYGHYEFLVMPFGVTNAPAIFMDLM 394

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            NR F  +LD+FVIVFIDDILVYSA+ ++H  HLRIVL+TLR HQLYAK SKCEF+L  IS
Sbjct: 395  NRVFREYLDQFVIVFIDDILVYSASEDEHARHLRIVLETLRRHQLYAKFSKCEFWLKSIS 454

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGHVIS +GI+VD +K++AV DWP P +V EVRSFLG+AGYYR+FVK FS+I+  +T+L
Sbjct: 455  FLGHVISGKGISVDPQKIQAVADWPRPTTVFEVRSFLGMAGYYRKFVKGFSQISTPLTRL 514

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
            T+K+ PFVWT  C+ +F  LK  L +APVL +P    GF + SDAS KGLGCVL Q G+V
Sbjct: 515  TQKSVPFVWTPECEASFQRLKDCLTSAPVLALPSGTEGFQVFSDASLKGLGCVLMQHGQV 574

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            ++YASRQLK HE+NYPTHDLELAAV+FALK+WRHYL G R EIFTDHKSLKYIFTQK++N
Sbjct: 575  ISYASRQLKPHEKNYPTHDLELAAVVFALKIWRHYLYGVRCEIFTDHKSLKYIFTQKDLN 634

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKPTAMF---LTTQRELLDEMRRMDLEV 3575
            +RQRRWLEL+ D+D+ +QY PG+ N+  DALSRK + +    LT    L+ +M R+ LEV
Sbjct: 635  LRQRRWLELIKDYDLTIQYQPGKANVVADALSRKSSGLSGIQLTCDDFLIRDMERLQLEV 694

Query: 3576 VIPGQACCMPMQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTRL 3755
            +         M IRS++  +I+ +Q  D+   +L  Q  +G   ++ I   G++    RL
Sbjct: 695  ISSSGLELAQMSIRSTLETRIQEAQKSDSDYSKLIAQIGSGKTPELRISDSGAIFCKNRL 754

Query: 3756 CVPR-GAIRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQQI 3932
             VP  G +RQE++ E+H S Y+IHPG  KMY D++  +WW GMK+++A FVS+C  CQ +
Sbjct: 755  WVPVFGDLRQEILYESHHSGYTIHPGSGKMYADMKLLFWWPGMKKDVAEFVSRCEACQLV 814

Query: 3933 KAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPFRV 4112
            KAEHQR  GLLQ LPIPEWKWE++TMDF  G PRS +GH+AIWV+VDRLTKSAHFLP R 
Sbjct: 815  KAEHQRPGGLLQSLPIPEWKWEEVTMDFAMGFPRSRQGHDAIWVVVDRLTKSAHFLPIRQ 874

Query: 4113 GQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQTD 4292
              S + LA +Y+ EIVRLHGVP  IVSDRD RFTS  W  +Q+ LG++L +STAFHPQTD
Sbjct: 875  TDSVDRLAQIYVKEIVRLHGVPRVIVSDRDGRFTSRLWKGIQQGLGTKLHFSTAFHPQTD 934

Query: 4293 GQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCRSP 4472
            GQSERTIQ LED+LR CVLDF GSWEDH+ L+EF+YNNSFQ+SI MAP+EALYGRKCR+P
Sbjct: 935  GQSERTIQVLEDLLRLCVLDFSGSWEDHIPLIEFAYNNSFQSSIGMAPYEALYGRKCRTP 994

Query: 4473 VYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVFLK 4652
            +   ++G+R+ LG      T   +  IR+ +K AQDRQQK+ N   R +EF+VGD V++K
Sbjct: 995  LTLTEVGDRQALGATFADETAQKINLIRERLKAAQDRQQKYYNQKHRFVEFQVGDFVYVK 1054

Query: 4653 ISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLRKYIR 4832
            +SP +GV RFG   KLSPR++GPF+I+ER+GK AY+L L  ++  VHNVFHVS LRK++ 
Sbjct: 1055 VSPMKGVSRFGQVSKLSPRYVGPFEILERIGKAAYKLMLSDSMPDVHNVFHVSTLRKWVS 1114

Query: 4833 DESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDSTWERED 5012
            D    +   E+EI+ +L+   +P  IL    + +++K I +V+VQW  ++  ++TWE+E 
Sbjct: 1115 DSGKKVSADEVEIQENLTYKEEPELILAYDVRKLRSKQIPMVKVQWKHRTAREATWEKES 1174

Query: 5013 QMREQYPHLF 5042
             MR  YP+LF
Sbjct: 1175 DMRRLYPYLF 1184



 Score =  237 bits (604), Expect = 2e-59
 Identities = 128/273 (46%), Positives = 176/273 (64%)
 Frame = +1

Query: 1684 FTLTAEQAEVAGDVVTGTISVYSQPAFALFDSGASRCFVSARFVSMHSIPYISLDVFWTI 1863
            ++L+ ++A  A DVVTGT+ +  QP   LFDSGAS  F+S     +  +  + L +  ++
Sbjct: 72   YSLSQQEARDAPDVVTGTVYISDQPCRVLFDSGASHSFLSEHCFEILHLDSMVLPISLSV 131

Query: 1864 STGNGSVSCGKECRDCLIVVGDHSFLADLLVIDNCEFDVILGMDWLSGCHAMIDCRRRAV 2043
                G+    ++   C I +    + + L+ +    +DVILGMDWLS   A IDC ++ V
Sbjct: 132  ILPAGNPLIARQFCLCEIEISGKKWKSSLIRLPISSYDVILGMDWLSQYEAQIDCLKKQV 191

Query: 2044 VFRMPGLPEFEFIGDVSPHQSDRVSIRARFMMMEEQQESVTPALISEFLDVFPEDLPGLP 2223
               + G        +    Q  R S+R   + +E    S  P ++ EF DVFPE+L GLP
Sbjct: 192  SLLVAG--------ERVVFQGLRASVRD--LNLEVGSVSEIP-VVREFADVFPEELVGLP 240

Query: 2224 PEREVEFAIEVFSGTGPISKAPYRMAPVELAELKKQVQEMLDKGLVRPSTSPWGAPVLLV 2403
            P+R+VEF+I+VF GT PISKAPYRMAP EL+EL  Q+QE++D+G VRPS SPWGAPVL V
Sbjct: 241  PDRDVEFSIDVFPGTAPISKAPYRMAPKELSELNFQLQELVDRGFVRPSVSPWGAPVLFV 300

Query: 2404 KKKDGSQRLCIDYRELNRVTVRNKYPLPRIDDL 2502
            KKKDG+ R+CIDYR+LN+VT++NKYPLPRIDDL
Sbjct: 301  KKKDGTLRMCIDYRDLNKVTIKNKYPLPRIDDL 333


>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1053

 Score = 1035 bits (2677), Expect = 0.0
 Identities = 487/849 (57%), Positives = 647/849 (76%), Gaps = 4/849 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQLKGA+VFSK+DLRSGYHQ++++  DI KTAF TRYG YEF VM FG+TNAPA FM++M
Sbjct: 202  DQLKGASVFSKIDLRSGYHQLKIRPEDIPKTAFTTRYGLYEFTVMSFGLTNAPAYFMNMM 261

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            N+ F  FLDKFV+VFIDDIL+YS   ++HE+HLRI+L  LRE+QLYAK +KCEF+LSQ++
Sbjct: 262  NKVFMEFLDKFVVVFIDDILIYSKNEDEHEDHLRIILGKLRENQLYAKFNKCEFWLSQVA 321

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGH++S+ G+AVD  KVEAV  W  P+SV EVRSFLGLAGYYRRF++ FSKIA  MT+L
Sbjct: 322  FLGHIVSAGGVAVDPAKVEAVMGWKQPKSVTEVRSFLGLAGYYRRFIEGFSKIARPMTQL 381

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
             +K + F WTEAC+ +  ELK+RLV+APVL +PD    F I  DAS +GLGCVL Q G+V
Sbjct: 382  LKKEKKFEWTEACEKSLQELKKRLVSAPVLILPDIHKDFEIFCDASRQGLGCVLMQEGKV 441

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            VAYASRQL+ HE NYPTHDLELAA++ ALK+WRHYL+G R EIFTDHKSLKYIFTQ E+N
Sbjct: 442  VAYASRQLRPHEGNYPTHDLELAAIVHALKIWRHYLIGNRCEIFTDHKSLKYIFTQSELN 501

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKP---TAMFLTTQRELLDEMRRMDLEV 3575
            +RQRRWLEL+ D+D+ + YHPG+ N+  DALSRK    T +    Q EL +E++ ++LE+
Sbjct: 502  LRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCNTILVQKNQPELYEELKHLNLEI 561

Query: 3576 VIPGQACCMPMQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTRL 3755
            V   Q C   ++++ ++  QI+  Q  D  ++E+++    G          G++ FG R+
Sbjct: 562  V--NQGCVNALEVQPTLQSQIREKQLEDEDIKEIKKNMRRGKAPGFSEDEQGTVWFGNRI 619

Query: 3756 CVP-RGAIRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQQI 3932
            CVP +  ++Q ++ EAH SPYSIHPG TKMY+DL++ YWW  MKREIA FV+ C ICQ++
Sbjct: 620  CVPNQQELKQSILKEAHESPYSIHPGSTKMYQDLKEKYWWVSMKREIAEFVAHCDICQRV 679

Query: 3933 KAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPFRV 4112
            KAEHQR AGLLQPLPIPEWKWE+I MDF+TGLPR+  G ++IWVI+DRLTK AHF+P + 
Sbjct: 680  KAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTQTGCDSIWVIIDRLTKVAHFIPVKT 739

Query: 4113 GQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQTD 4292
               +  LA++Y+ +IV LHGVP+ IVSDR ++FTS +W SL E+LG+RL +STA+HPQTD
Sbjct: 740  TYQSSKLAELYVAKIVCLHGVPKKIVSDRGSQFTSRFWKSLHEALGTRLNFSTAYHPQTD 799

Query: 4293 GQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCRSP 4472
            GQ+ER  Q LEDMLRAC LD+G SW+ +L   EFSYNNS+QAS++M+PFEALYGRKCR+P
Sbjct: 800  GQTERVNQVLEDMLRACALDYGKSWDKNLPFAEFSYNNSYQASLQMSPFEALYGRKCRTP 859

Query: 4473 VYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVFLK 4652
            + WD++GE +  GPELI      V+ IR+ +K AQ RQ+ +A+  +R L FE+GD V+L+
Sbjct: 860  LLWDEVGEHQFFGPELIKEAENKVKTIRERLKVAQTRQKSYADNRRRELTFEIGDFVYLR 919

Query: 4653 ISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLRKYIR 4832
            ++P RGV RF T+GKL+PRF+GP+ I+ + G+VAY+L LP +L+ VHNVFHVSQL+K +R
Sbjct: 920  VTPLRGVRRFRTKGKLAPRFVGPYKILAKRGEVAYQLELPTSLSAVHNVFHVSQLKKCLR 979

Query: 4833 DESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDSTWERED 5012
                      ++++ DL+   QP+ ILD +E+V ++K IR  +VQW+     ++TWERE+
Sbjct: 980  VPEDQTLIESIDLQEDLTYVEQPIKILDVAERVTRSKIIRSYKVQWSHHPESEATWEREE 1039

Query: 5013 QMREQYPHL 5039
             ++ +YPHL
Sbjct: 1040 DLKAEYPHL 1048



 Score =  191 bits (484), Expect = 3e-45
 Identities = 97/201 (48%), Positives = 130/201 (64%)
 Frame = +1

Query: 1900 CRDCLIVVGDHSFLADLLVIDNCEFDVILGMDWLSGCHAMIDCRRRAVVFRMPGLPEFEF 2079
            C +  + +   +FLADL+V+ +   DVILGMDWL+     I+C  R++          EF
Sbjct: 7    CPNLTLEISGVTFLADLIVLHSQGLDVILGMDWLAKNQGQINCANRSIALTNKQGISVEF 66

Query: 2080 IGDVSPHQSDRVSIRARFMMMEEQQESVTPALISEFLDVFPEDLPGLPPEREVEFAIEVF 2259
                S         R+    ++E +    P ++ EF DVFP++LPG+PP+R+V F I++ 
Sbjct: 67   KPKTS------TGGRSVLTSLKELKLEDIP-VVQEFPDVFPDELPGMPPDRDVVFIIDLV 119

Query: 2260 SGTGPISKAPYRMAPVELAELKKQVQEMLDKGLVRPSTSPWGAPVLLVKKKDGSQRLCID 2439
             GT PISK PYRM   ELAE+KKQ+ E+  KG +RPS+SPWGAPVL VKKKD S R+C+D
Sbjct: 120  PGTAPISKRPYRMPANELAEMKKQIMELKQKGYIRPSSSPWGAPVLFVKKKDNSMRMCVD 179

Query: 2440 YRELNRVTVRNKYPLPRIDDL 2502
            YR LN VT++NKYPLPRIDDL
Sbjct: 180  YRSLNEVTIKNKYPLPRIDDL 200


>ref|XP_015078360.1| PREDICTED: uncharacterized protein LOC107022192 [Solanum pennellii]
          Length = 1745

 Score = 1034 bits (2674), Expect = 0.0
 Identities = 499/858 (58%), Positives = 641/858 (74%), Gaps = 11/858 (1%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQL+GA++FSK+DLRSGYHQ++++ SDI KTAFRTRYGHYEFLVM FG+TNAPA FM+LM
Sbjct: 859  DQLQGASLFSKIDLRSGYHQLKIRASDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMELM 918

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            N  F P+LD FVIVFIDDILVYS T E H  HLRIVLQ LRE +LYAK SKCEF+L+ ++
Sbjct: 919  NGVFRPYLDSFVIVFIDDILVYSKTEEDHVRHLRIVLQRLREEKLYAKFSKCEFWLTSVT 978

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGHV+S +GI VD  K+EAV+ W  P S  E+RSF+GLAGYYRRFV+ FS IA  +T+L
Sbjct: 979  FLGHVVSKEGIRVDPAKIEAVRGWTRPTSPTEIRSFVGLAGYYRRFVQSFSTIAAPLTRL 1038

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
            TR++  F W++ C+ +F +LK  L +APVLT+P++   F ++ DASG GLG VL Q+G+V
Sbjct: 1039 TRQDVGFQWSDECEESFQKLKTLLTSAPVLTLPEEGVDFTVYCDASGVGLGGVLMQKGKV 1098

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            +AYASRQLK HE+NYPTHDLELAAV+F LKLWRHYL G   EIFTDH+SL+YIF+Q+++N
Sbjct: 1099 IAYASRQLKSHEKNYPTHDLELAAVVFVLKLWRHYLYGVHCEIFTDHRSLQYIFSQRDLN 1158

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKPTAMFLTTQRELLDEMRRMDLEVVI- 3581
            +RQRRWLEL+ D+D+ + YHPG+ N+  DALSRK  +M       + +     D++++  
Sbjct: 1159 LRQRRWLELLKDYDVTILYHPGKANVVADALSRKTPSMGSLAALSIEERPLARDVQILAN 1218

Query: 3582 ---------PGQACCMPMQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGS 3734
                             ++ RSS+VEQI+  Q  D KL  +R++   G   + V+ +DG 
Sbjct: 1219 SLVRLQISEESDGMIAFIEARSSLVEQIRAHQFDDEKLCLIRDKVLRGEAKEAVLDSDGV 1278

Query: 3735 LRFGTRLCVPR-GAIRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSK 3911
            LR G R+CVPR G   + ++ EAH + YSIHPG  KMY DL QHYWW GMKR+I+ FVS+
Sbjct: 1279 LRIGGRICVPRTGDFIRLILEEAHCTRYSIHPGAAKMYHDLSQHYWWCGMKRDISDFVSR 1338

Query: 3912 CLICQQIKAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSA 4091
            CL CQQ+K EHQR  G+ Q +PIP WKWE+ITMDFV GLP +  G+++IWVIVDRLTKSA
Sbjct: 1339 CLTCQQVKCEHQRPGGVSQRMPIPTWKWERITMDFVVGLPTTVGGYDSIWVIVDRLTKSA 1398

Query: 4092 HFLPFRVGQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYST 4271
            HF+P RV  + E LA++Y+ +IVRLHGVP SI+SDR + FTSH+W +LQ  LG++L  ST
Sbjct: 1399 HFIPVRVKYTAEKLAELYISQIVRLHGVPISIISDRGSLFTSHFWKALQHGLGTQLDMST 1458

Query: 4272 AFHPQTDGQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALY 4451
            AFHPQTDGQSERTIQ LEDMLRACV+DFG  W+ HL L EF+YNNS+ +SI+MAPFEALY
Sbjct: 1459 AFHPQTDGQSERTIQVLEDMLRACVIDFGARWDQHLPLAEFAYNNSYHSSIQMAPFEALY 1518

Query: 4452 GRKCRSPVYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEV 4631
            GR+CRSP+ W D  E   L  +L+   +  V  I+  + TAQ RQ+ +A+   RAL F  
Sbjct: 1519 GRRCRSPIGWFDSAEMDSLDTDLLRDAMEQVRMIQYRLLTAQSRQKSYADRRVRALVFME 1578

Query: 4632 GDHVFLKISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVS 4811
            GDHV+L++SP +GV+RFG +GKLSPRFIGPF+I+ RVG+VAY+LALPP+L+ VH VFHVS
Sbjct: 1579 GDHVWLRVSPMKGVMRFGKKGKLSPRFIGPFEILSRVGEVAYKLALPPSLSAVHPVFHVS 1638

Query: 4812 QLRKYIRDESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGD 4991
             LRKYI DESHVL    +E+ PDL+   +P+AILDR  + ++ K I  V+VQW  +S  +
Sbjct: 1639 MLRKYIPDESHVLSLDSVELGPDLTFEEEPIAILDRQIRKLRTKEIASVKVQWKHRSVEE 1698

Query: 4992 STWEREDQMREQYPHLFE 5045
            +TWE E  MR +YP LFE
Sbjct: 1699 ATWETESDMRARYPQLFE 1716



 Score = 90.9 bits (224), Expect = 3e-14
 Identities = 81/319 (25%), Positives = 132/319 (41%), Gaps = 22/319 (6%)
 Frame = +1

Query: 724  FRRLQPATFAGTETPLDADQWLVDMTNLLSAARIPEKDMVEVVKIQLTDIARTWWMTEEE 903
            FR++ P  F G ++  DA ++L     LL    + E   V    +QL   AR WW T   
Sbjct: 445  FRKMDPPQFQGGKSE-DAHEFLTTCRELLEVVGLAESHGVRYATLQLRGPARDWWRTYSG 503

Query: 904  RYDLAEGEFISWEMFSAAFLVRFFPKSAKKQMEQQFVNLVQGDRSVDAYAAEFIRLSRFA 1083
               +     ++WE F++AF  RF P S +++   +F +L Q   SV  Y A F +LSR A
Sbjct: 504  CLPVGSPP-VTWEQFASAFQDRFIPWSVREESRLRFESLRQDGLSVTEYEARFCQLSRHA 562

Query: 1084 PKLVMDEEDRADRFQQGLRLEIQ--MQQSSQELETYDQVLTAARKAELLIQK-------- 1233
              ++ +E +R  RF +GL   I+  + ++S+E  ++  +++AA++AEL+ ++        
Sbjct: 563  LAIIPNETERIRRFVRGLTFSIRSAVFRTSREGTSFQSIVSAAKEAELMEREEFGDPKRA 622

Query: 1234 KAASGYHGQQKRPYGQMTSVAQPSQRA---AQIPRSTXXXXXXXXXXXXXXCSFCQRTGH 1404
            + +  +HG      G         QR    A +P                     Q+   
Sbjct: 623  RISGQFHGASSGGRGSQRVSGSFQQRGPIHASMPTFEGGQTSRGSYGPGQGSYGSQQRPT 682

Query: 1405 LKKDCHRANGA---------CLACGSMDHKIAQCPNGRRHLETGATAPGQIRXXXXXXXX 1557
             + +    +G+         C  CG  DH + QC + R     G   P            
Sbjct: 683  GRGNYSGFSGSAQQFPGQRFCFTCGDPDHLMRQCTSQRGR---GGPRPNS---------- 729

Query: 1558 XXXXXXIQTRPPAGQVQAR 1614
                   QTRPPA Q + R
Sbjct: 730  -----SFQTRPPAPQGRGR 743


>gb|OTG36861.1| putative reverse transcriptase domain-containing protein [Helianthus
            annuus]
          Length = 2099

 Score = 1034 bits (2673), Expect = 0.0
 Identities = 496/814 (60%), Positives = 635/814 (78%), Gaps = 4/814 (0%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQL+GA  FSK+DLRSGYHQ+RV+  D+ KTAFRTRYGHYEFLVMPFG+TNAPA FMDLM
Sbjct: 1235 DQLQGAKFFSKIDLRSGYHQLRVRDQDVHKTAFRTRYGHYEFLVMPFGLTNAPAVFMDLM 1294

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            NR F  +LD+FVIVFIDDILV+S +  +HE+HLR VL TLR+ +LYAK SKC+F+L Q++
Sbjct: 1295 NRVFHEYLDRFVIVFIDDILVFSKSRGEHEDHLRTVLGTLRQEKLYAKFSKCDFWLEQVA 1354

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGH++S++GI +D  KVEA+  WP P SV EVRSFLGLAGYYRRFV+ FS +A  +T+L
Sbjct: 1355 FLGHIVSAEGITMDPSKVEAITKWPRPTSVTEVRSFLGLAGYYRRFVEGFSILALPLTQL 1414

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
             RK   F W +  + +F+ LKQ+LV+AP+LT+P   GGF I+SDAS KGLGCVL Q G+V
Sbjct: 1415 LRKGVKFTWNDDREKSFEALKQKLVSAPILTLPSDIGGFDIYSDASKKGLGCVLMQHGKV 1474

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            +AYASRQLK +E NYPTHDLELAAV+FALK+WRHYL GE   IFTDHKSLKYIFTQKE+N
Sbjct: 1475 IAYASRQLKPYEVNYPTHDLELAAVVFALKIWRHYLYGETCNIFTDHKSLKYIFTQKELN 1534

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKPTAMF--LTTQRELLDEMRRMDLEVV 3578
            MRQRRWLEL+ D+D ++QYHPG+ N+  DALSRK +     LT +  +L ++RRM++ + 
Sbjct: 1535 MRQRRWLELLKDYDANIQYHPGKANVVADALSRKNSGGLACLTLEPHILSDLRRMEIGIQ 1594

Query: 3579 IPGQACCMP-MQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSLRFGTRL 3755
            +      +  ++I  +++ QIK +Q  D +L  + +  E G +++  +   G++  G RL
Sbjct: 1595 VGESGGYLARLKIEPNLITQIKEAQKDDGELWAVLQNLEVGKQSEFRVDEHGTIWCGKRL 1654

Query: 3756 CVPR-GAIRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKCLICQQI 3932
            CVP   ++R+ L+ EAHSSPYSIHPG TKMYRDLRQH+WW GMK ++AR VS+CLICQQ+
Sbjct: 1655 CVPDDSSLRESLLTEAHSSPYSIHPGSTKMYRDLRQHFWWSGMKEDVARHVSQCLICQQV 1714

Query: 3933 KAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAHFLPFRV 4112
            K EHQR +GLLQPL IP WKW+ I+MDFVTGLPR+   ++AIWV+VDRLTKSAHFLP + 
Sbjct: 1715 KIEHQRASGLLQPLDIPVWKWDDISMDFVTGLPRTRMKNDAIWVVVDRLTKSAHFLPIQK 1774

Query: 4113 GQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTAFHPQTD 4292
            G     L+++++ EIVRLHG P SIV DRD RFTS +W   Q +  +++++STAFHPQTD
Sbjct: 1775 GYLVSKLSEIFLREIVRLHGTPSSIVCDRDPRFTSRFWKGFQNAWNTKIRFSTAFHPQTD 1834

Query: 4293 GQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYGRKCRSP 4472
            GQSERTIQTLEDMLR+C L++ G+W+++L LVEF+YNNS+QASI+MAPFE LYGRKCR+P
Sbjct: 1835 GQSERTIQTLEDMLRSCALEWTGNWDEYLCLVEFAYNNSWQASIDMAPFELLYGRKCRAP 1894

Query: 4473 VYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVGDHVFLK 4652
              WD++GE+ + GPEL+  T   V   R+ +K AQ RQ+ +A+ H+R +EF VG+ VFLK
Sbjct: 1895 TCWDEVGEKMIEGPELVQITNEKVAIAREKLKEAQSRQKSYADRHRRVVEFNVGEKVFLK 1954

Query: 4653 ISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQLRKYIR 4832
            +SP RGV RFG +GKLSPRFIGPF+I+ERVG+V+YRLALPP LA VHNVFH+S LR Y  
Sbjct: 1955 VSPCRGVRRFGIKGKLSPRFIGPFEILERVGEVSYRLALPPQLAHVHNVFHISLLRGYNY 2014

Query: 4833 DESHVLDHSELEIRPDLSVAAQPMAILDRSEKVM 4934
               HV+++S  EIR DLS   +P AILDR E+VM
Sbjct: 2015 HPLHVVNYSLHEIREDLSYEEEPEAILDRQERVM 2048



 Score =  244 bits (623), Expect = 4e-61
 Identities = 193/639 (30%), Positives = 280/639 (43%), Gaps = 46/639 (7%)
 Frame = +1

Query: 724  FRRLQPATFAGTETPLDADQWLVDMTNLLSAARIPEKDMVEVVKIQLTDIARTWWM-TEE 900
            F + +P +F    TP+ A  W+  +  +  A  + ++    +   +L + A+TWW    E
Sbjct: 656  FIKQKPRSFTKATTPIVARDWIAHIEKIFRALGVGDEFKSRLASYKLEEDAQTWWEGVLE 715

Query: 901  ERYDLAEGEFISWEMFSAAFLVRFFPKSAKKQMEQQFVNLVQ-GDRSVDAYAAEFIRLSR 1077
            ER      E + W  F A F  ++F    K    +++ N+ Q  D  +  +   F RL  
Sbjct: 716  ERGGDPFVENLPWADFRAIFFEKYFNSVDKSSYTREYHNIRQRNDEPLSDFTDRFYRLVG 775

Query: 1078 FAPKLVMDEEDRADRFQQGLRLEIQMQQSSQELETYDQVLTAARKAELLI---------- 1227
            F        E++A+++Q  +   I+         T  +   AA+K ++            
Sbjct: 776  FLGSAAGTPEEQAEKYQWAVCDRIRRAIIQSTFPTVAEAAKAAKKVDMENKEFLGGSNNS 835

Query: 1228 ------------------------QKKAASGYHGQQKRPY---GQMTSVAQPSQRAAQIP 1326
                                    Q    +   G+  RP+   GQ     +P Q   Q  
Sbjct: 836  RKRNRDEYRTSFTSESPQAPTRNNQNNLGNRSSGRNNRPWQGRGQNQGQTKPYQPPTQA- 894

Query: 1327 RSTXXXXXXXXXXXXXXCSFCQRTGHLKKDCHRANGACLACGSMDHKIAQCPN-GRRHLE 1503
                             C+ C +       C R  GACL CG M HKI +CP  G R  +
Sbjct: 895  -QPVNQRGNQNPTQPPVCNHCNKRH--PGICRRLTGACLKCGDMGHKINECPKAGNRTTD 951

Query: 1504 T--GATAPGQIRXXXXXXXXXXXXXXIQTRPPAGQVQARPAYPPQSVAFXXXXXXXXXXX 1677
            T  GAT P                      P  G                          
Sbjct: 952  TTRGATMP----------------------PTTG-------------------------G 964

Query: 1678 AAFTLTAEQAEVAGDVVTGTISVYSQPAFALFDSGASRCFVSARFVSMHSIPYISLDVFW 1857
              F+LTA +A  A   V+G+I +  +  + LFD+GA+   VS        I    LD   
Sbjct: 965  RVFSLTAGEAANAPGTVSGSIYLGERDLYVLFDTGATHSIVSQLITRHLKISPSLLDPAL 1024

Query: 1858 TISTGNGSVSCGKEC-RDCLIVVGDHSFLADLLVIDNCEFDVILGMDWLSGCHAMIDCRR 2034
             IST  G+ S      +DC +V+G+   +A+L  +   +FDVILGMDWLS   A IDC  
Sbjct: 1025 VISTPMGNPSVITHVYKDCPLVIGNVIRIANLYPMQMGDFDVILGMDWLSTHRATIDCHS 1084

Query: 2035 RAVVFRMPGLPEFEFIGDVSPHQSDRV--SIRARFMMMEEQQESVTPALISEFLDVFPED 2208
            + V+F     PE  + G   P +S ++  +++A+ ++             + FL    + 
Sbjct: 1085 KRVIFGDILNPECIYQGS-QPRKSIKIISALKAQKLISHG---------CAGFLAAIKDT 1134

Query: 2209 LPGLPPEREVE-FAIEVFSGTGPISKAPYRMAPVELAELKKQVQEMLDKGLVRPSTSPWG 2385
                P   +V  F I++  G  PISKAPYRMAP+EL ELK+Q+QE+L+ G +RPS SPWG
Sbjct: 1135 SVDAPRVEDVPIFTIDLIPGAEPISKAPYRMAPLELKELKEQLQELLELGFIRPSVSPWG 1194

Query: 2386 APVLLVKKKDGSQRLCIDYRELNRVTVRNKYPLPRIDDL 2502
            APVL VKKKDGS RLCIDYRELN++T+RN+YPLPRIDDL
Sbjct: 1195 APVLFVKKKDGSMRLCIDYRELNKITIRNRYPLPRIDDL 1233



 Score = 72.0 bits (175), Expect = 2e-08
 Identities = 70/308 (22%), Positives = 112/308 (36%), Gaps = 42/308 (13%)
 Frame = +1

Query: 724  FRRLQPATFAGTETPLDADQWLVDMTNLLSAARIPEKDMVEVVKIQLTDIARTWWM-TEE 900
            F + +P +F    TP+ A  W+  +  +  A  + ++    +   +L + A+TWW    E
Sbjct: 118  FIKQKPRSFTKATTPIVARDWIAHIEKIFRALGVGDEFKSRLASYKLEEDAQTWWEGVLE 177

Query: 901  ERYDLAEGEFISWEMFSAAFLVRFFPKSAKKQMEQQFVNLVQ-GDRSVDAYAAEFIRLSR 1077
            ER      E + W  F A F  ++F    K    +++ N+ Q  D  +  +   F RL  
Sbjct: 178  ERGGDPFVENLPWADFRAIFFEKYFNSVDKSSYTREYHNIRQRNDEPLSDFTDRFYRLVG 237

Query: 1078 FAPKLVMDEEDRADRFQQGLRLEIQMQQSSQELETYDQVLTAARKAEL------------ 1221
            F        E++A+++Q  +   I+         T  +   AA+K ++            
Sbjct: 238  FLGSAAGTPEEQAEKYQWAVCDRIRRAIIQSTFPTVAEAAKAAKKVDMENKEFLGGSNNS 297

Query: 1222 ----------------------LIQKKAASGYHGQQKRPY---GQMTSVAQPSQRAAQIP 1326
                                    Q    +   G+  RP+   GQ     +P Q   Q  
Sbjct: 298  RKRNRDEYRTSFTSESPQAPTRNNQNNLGNRSSGRNNRPWQGRGQNQGQTKPYQPPTQ-- 355

Query: 1327 RSTXXXXXXXXXXXXXXCSFCQRTGHLKKDCHRANGACLACGSMDHKIAQCPN-GRRHLE 1503
                             C+ C +       C R  GACL CG M HKI +CP  G R  +
Sbjct: 356  AQPVNQRGNQNPTQPPVCNHCNK--RHPGICRRLTGACLKCGDMGHKINECPKAGNRTTD 413

Query: 1504 T--GATAP 1521
            T  GAT P
Sbjct: 414  TTRGATMP 421


>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score = 1033 bits (2671), Expect = 0.0
 Identities = 496/857 (57%), Positives = 641/857 (74%), Gaps = 10/857 (1%)
 Frame = +3

Query: 2505 DQLKGATVFSKLDLRSGYHQVRVKTSDIQKTAFRTRYGHYEFLVMPFGVTNAPATFMDLM 2684
            DQL+GAT FSK+DLRSGYHQ+RV+  DI KTAFRTRYGHYEFLVM FG+TNAPA FMDLM
Sbjct: 742  DQLQGATCFSKIDLRSGYHQLRVRERDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLM 801

Query: 2685 NRTFAPFLDKFVIVFIDDILVYSATPEQHEEHLRIVLQTLREHQLYAKLSKCEFYLSQIS 2864
            NR F P+LD FVI+FIDDIL+YS   E H  HLR VLQTL++ +LYAK SKCEF+L  ++
Sbjct: 802  NRVFRPYLDMFVIIFIDDILIYSRNEEDHASHLRTVLQTLKDKELYAKFSKCEFWLKSVA 861

Query: 2865 FLGHVISSQGIAVDSKKVEAVQDWPIPRSVPEVRSFLGLAGYYRRFVKDFSKIAESMTKL 3044
            FLGH++S  GI VD++K+EAVQ+WP P S  E+RSFLGLAGYYRRFV+ FS IA  +TKL
Sbjct: 862  FLGHIVSGDGIKVDTRKIEAVQNWPRPTSPTEIRSFLGLAGYYRRFVEGFSSIASPLTKL 921

Query: 3045 TRKNEPFVWTEACQGAFDELKQRLVTAPVLTIPDQQGGFAIHSDASGKGLGCVLSQRGRV 3224
            T+K   F W+EAC+ +F ELK+RL+TAPVLT+P+   G  ++ DAS  GLGCVL Q G+V
Sbjct: 922  TQKTGKFQWSEACEKSFQELKKRLITAPVLTLPEGTQGLVVYCDASRIGLGCVLMQNGKV 981

Query: 3225 VAYASRQLKVHERNYPTHDLELAAVIFALKLWRHYLLGERVEIFTDHKSLKYIFTQKEIN 3404
            +AYASRQLKVHE+NYPTHDLELA V+FALKLWRHYL G  V+IFTDHKSL+Y+ TQK +N
Sbjct: 982  IAYASRQLKVHEKNYPTHDLELAVVVFALKLWRHYLYGVHVDIFTDHKSLQYVLTQKALN 1041

Query: 3405 MRQRRWLELMADFDIDLQYHPGRQNLAPDALSRKPTAMFLTT-----QRELLDEMRRMDL 3569
            +RQRRWLEL+ D+D+ + YHPG+ N+  D+LSR   +M  TT     +REL  +M R+  
Sbjct: 1042 LRQRRWLELLKDYDLSILYHPGKANVVADSLSR--LSMGSTTHIEEGRRELAKDMHRLAC 1099

Query: 3570 EVV----IPGQACCMPMQIRSSIVEQIKGSQAGDAKLQELREQAEAGLRTDIVIHADGSL 3737
              V           +  +  SS++ ++K  Q  D  L EL+   +           DG L
Sbjct: 1100 LGVRFTDSTEGGIAVTSKAESSLMSEVKEKQDQDPILLELKANVQKQRVLAFEQGGDGVL 1159

Query: 3738 RFGTRLCVPR-GAIRQELMAEAHSSPYSIHPGGTKMYRDLRQHYWWHGMKREIARFVSKC 3914
            R+  RLCVP    +++ +M EAHSS YS+HPG TKMYRDLR+ YWW+GMK+ IA FV+KC
Sbjct: 1160 RYQGRLCVPMVDGLQERVMEEAHSSRYSVHPGSTKMYRDLREFYWWNGMKKGIAEFVAKC 1219

Query: 3915 LICQQIKAEHQRTAGLLQPLPIPEWKWEKITMDFVTGLPRSPRGHNAIWVIVDRLTKSAH 4094
              CQQ+K EHQR  GL Q + +PEWKWE I MDF+TGLPRS R H++IWVIVDR+TKSAH
Sbjct: 1220 PNCQQVKVEHQRPGGLAQNIELPEWKWEMINMDFITGLPRSRRQHDSIWVIVDRMTKSAH 1279

Query: 4095 FLPFRVGQSTESLADMYMHEIVRLHGVPESIVSDRDTRFTSHYWTSLQESLGSRLKYSTA 4274
            FLP +   S E  A +Y+ EIVRLHGVP SI+SDR  +FT+ +W S Q+ LGS++  STA
Sbjct: 1280 FLPVKTTHSAEDYAKLYIQEIVRLHGVPISIISDRGAQFTAQFWKSFQKGLGSKVSLSTA 1339

Query: 4275 FHPQTDGQSERTIQTLEDMLRACVLDFGGSWEDHLHLVEFSYNNSFQASIEMAPFEALYG 4454
            FHPQTDGQ+ERTIQTLEDMLRACV+DF  +W+DHL L+EF+YNNS+ +SI+MAP+EALYG
Sbjct: 1340 FHPQTDGQAERTIQTLEDMLRACVIDFKSNWDDHLPLIEFAYNNSYHSSIQMAPYEALYG 1399

Query: 4455 RKCRSPVYWDDIGERKLLGPELITRTVGVVEQIRQHMKTAQDRQQKWANIHKRALEFEVG 4634
            R+CRSP+ W ++GE +L+GP+L+ + +  V+ I++ +KTAQ RQ+ + ++ +RALEFEV 
Sbjct: 1400 RRCRSPIGWFEVGEARLIGPDLVHQAMEKVKVIQERLKTAQSRQKSYTDVRRRALEFEVD 1459

Query: 4635 DHVFLKISPTRGVIRFGTRGKLSPRFIGPFDIIERVGKVAYRLALPPALAGVHNVFHVSQ 4814
            D V+LK+SP +GV+RFG +GKLSPR+IGP+ I++RVG VAY L LP  LA VH VFH+S 
Sbjct: 1460 DWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIVQRVGSVAYELELPQELAAVHPVFHISM 1519

Query: 4815 LRKYIRDESHVLDHSELEIRPDLSVAAQPMAILDRSEKVMKNKTIRLVRVQWNPQSPGDS 4994
            L+K I D S +L    ++I+ +LS    P+ ILDR  + ++ K +  V+V W  Q   ++
Sbjct: 1520 LKKCIGDPSLILPTESVKIKDNLSYEEVPVQILDRQVRRLRTKDVASVKVLWRNQFVEEA 1579

Query: 4995 TWEREDQMREQYPHLFE 5045
            TWE E+ M+++YPHLFE
Sbjct: 1580 TWEAEEDMKKRYPHLFE 1596



 Score =  293 bits (751), Expect = 1e-76
 Identities = 215/686 (31%), Positives = 315/686 (45%), Gaps = 61/686 (8%)
 Frame = +1

Query: 628  FQEGLLRAQQTAT--AAMERSTAPREAKPGNVSDFRRLQPATFAGTETPLDADQWLVDMT 801
            F+E +    Q        +R      A    + +F  + P +F G+ T  D + ++ ++ 
Sbjct: 97   FREAIRMLSQVVANQVGQQRGVRHEGADTSRIREFLGMNPPSFMGSSTTEDPENFIEELK 156

Query: 802  NLLSAARIPEKDMVEVVKIQLTDIARTWWMTEEERYDLAEGEFISWEMFSAAFLVRFFPK 981
             +     + + + VE+   QL D+ARTW + + +   +      SW  F  AFL  FFP+
Sbjct: 157  RIFDVMHVADTERVELAAYQLKDVARTW-LDQWKGGRVENAPSASWANFEEAFLGHFFPR 215

Query: 982  SAKKQMEQQFVNLVQGDRSVDAYAAEFIRLSRFAPKLVMDEEDRADRFQQGL-------- 1137
              K+   ++F+ L Q   SV  Y+ +F +LSR+AP++V D  +R   F  GL        
Sbjct: 216  ELKEAKVREFLTLKQEPLSVREYSLKFTQLSRYAPEMVADMRNRMSLFVAGLSRLSSKEG 275

Query: 1138 ------------RLEIQMQQSSQELETYDQVLTAARKAELLIQKKAASGYH-GQQK---- 1266
                        RL + +QQ  +E           R  E    K+A +G   GQQK    
Sbjct: 276  RAAMLIGDMDISRLMVYVQQVEEE---------KLRDREEFRSKRAKTGNEPGQQKGNAN 326

Query: 1267 RP-YGQMTSVAQPSQRAAQIPRSTXXXXXXXXXXXXXX-----------------CSFCQ 1392
            RP + +      PS  +A  PR                                 C+ C 
Sbjct: 327  RPSFQERQKGPAPSSVSAPAPRYRGGHNGQNSKDFKARPVQSSGSVAQRSSLFPACARCG 386

Query: 1393 RTGHLKKDCHRANGACLACGSMDHKIAQCPNGRRHLETGATAPGQIRXXXXXXXXXXXXX 1572
            RT   K  C      C  CG   H + +CP   +    G+ + G                
Sbjct: 387  RTHPGK--CRDGQTGCFKCGQEGHFVKECPKNNQ----GSGSLG---------------- 424

Query: 1573 XIQTRPPAGQVQARPAYPPQSVAFXXXXXXXXXXXAAFTLTAEQAEVAGDVVTGTISVYS 1752
               +R  +  V       P+                A T   EQ E + +VVT  I V++
Sbjct: 425  ---SRTQSSSVAPPDRMTPRGATSSTGGGANRLY--AITSRHEQ-ENSPNVVTAMIKVFA 478

Query: 1753 QPAFALFDSGASRCFVSARFVSMHSIPYISLDVFWTISTGNG-SVSCGKECRDCLIVVGD 1929
               +AL D GAS  FV+    +   +    L   + +ST  G S+   +  RDC + +  
Sbjct: 479  FYVYALLDPGASLSFVTPYVANKFDVLPERLCEPFCVSTPVGESILAERVYRDCPVSINH 538

Query: 1930 HSFLADLLVIDNCEFDVILGMDWLSGCHAMIDCRRRAVVFRMPGLPEFEFIGDVSPHQSD 2109
             S + DL+ +D  +FDVILGMDWL  C+A IDCR R V F+ P  P  E+    +  +  
Sbjct: 539  KSTMVDLIELDMVDFDVILGMDWLHACYASIDCRTRVVKFQFPSEPILEWSSSSAVPKGR 598

Query: 2110 RVS-IRAR--------FMMMEEQQESV------TPALISEFLDVFPEDLPGLPPEREVEF 2244
             +S ++AR        + +      SV      +  ++ EF +VFP+DLPG+PPERE++F
Sbjct: 599  FISYLKARKLVSKGCIYHLARVNDSSVEIPYFQSVPIVREFPEVFPDDLPGIPPEREIDF 658

Query: 2245 AIEVFSGTGPISKAPYRMAPVELAELKKQVQEMLDKGLVRPSTSPWGAPVLLVKKKDGSQ 2424
             I++   T PIS  PYRMAP EL ELK    ++L+KG +RPS SPWGAPVL V+KKDGS 
Sbjct: 659  GIDLIPDTRPISIPPYRMAPAELKELK----DLLEKGFIRPSVSPWGAPVLFVRKKDGSL 714

Query: 2425 RLCIDYRELNRVTVRNKYPLPRIDDL 2502
            R+CIDYR+LN+VT++NKYPLPRIDDL
Sbjct: 715  RICIDYRQLNKVTIKNKYPLPRIDDL 740