BLASTX nr result
ID: Ophiopogon23_contig00003908
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00003908
(425 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP17739.1| unnamed protein product [Coffea canephora] 128 2e-46
emb|CDP17738.1| unnamed protein product [Coffea canephora] 127 3e-46
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 125 8e-46
gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium bar... 125 4e-45
gb|PKA55182.1| Retrovirus-related Pol polyprotein from transposo... 112 2e-41
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 107 5e-40
gb|KYP59920.1| Retrovirus-related Pol polyprotein from transposo... 103 2e-37
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo... 103 3e-37
gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposo... 103 3e-37
gb|KYP68607.1| Retrovirus-related Pol polyprotein from transposo... 101 1e-36
gb|PNX62043.1| retrovirus-related Pol polyprotein from transposo... 100 1e-36
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 96 2e-36
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 96 2e-36
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 97 2e-36
gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna ... 99 2e-36
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 102 5e-36
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 102 6e-36
gb|KYP69055.1| Retrovirus-related Pol polyprotein from transposo... 98 8e-36
dbj|GAU46320.1| hypothetical protein TSUD_401910 [Trifolium subt... 96 4e-35
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 100 1e-34
>emb|CDP17739.1| unnamed protein product [Coffea canephora]
Length = 435
Score = 128 bits (322), Expect(2) = 2e-46
Identities = 59/80 (73%), Positives = 69/80 (86%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
LDYVH++VWGP++ SLGG YFV+FIDD+SRR WV+TMK K EVLE F++WK RVE QT
Sbjct: 110 LDYVHSNVWGPAKTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEVLEIFLKWKARVENQT 169
Query: 183 GRKIKKLRSDNGGEYKSDPF 242
GRKIK LR+DNGGEYKSDPF
Sbjct: 170 GRKIKILRTDNGGEYKSDPF 189
Score = 85.5 bits (210), Expect(2) = 2e-46
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = +1
Query: 250 GIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYASHLVNRLP 423
GI +HFT+R TPQQNGV+ER+N+TL+EK CM + + L + FWAE V+YA HLVNRLP
Sbjct: 197 GIVQHFTVRKTPQQNGVSERMNKTLVEKVHCMLSNARLGRKFWAETVTYAQHLVNRLP 254
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 127 bits (320), Expect(2) = 3e-46
Identities = 58/80 (72%), Positives = 69/80 (86%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
LDYVH+DVWGP++ SLGG YFV+FIDD+SRR WV+TMK K E+L+ F++WK RVE QT
Sbjct: 502 LDYVHSDVWGPAKTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEMLKIFLKWKARVENQT 561
Query: 183 GRKIKKLRSDNGGEYKSDPF 242
GRKIK LR+DNGGEYKSDPF
Sbjct: 562 GRKIKILRTDNGGEYKSDPF 581
Score = 85.5 bits (210), Expect(2) = 3e-46
Identities = 37/58 (63%), Positives = 46/58 (79%)
Frame = +1
Query: 250 GIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYASHLVNRLP 423
GI RHF +R PQQNGV+E +N+TL+EK RCM + +GL + FWAE V+YA HLVNRLP
Sbjct: 589 GIVRHFIVRKIPQQNGVSEHMNKTLVEKVRCMLSNAGLGRKFWAEAVTYAQHLVNRLP 646
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 125 bits (315), Expect(2) = 8e-46
Identities = 54/80 (67%), Positives = 70/80 (87%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
LDYVH+DVWGP++ S+GG +YFV+F+DD+SRR WV+TMK+K++VLE F++WK VE T
Sbjct: 416 LDYVHSDVWGPAKTPSIGGRHYFVTFVDDFSRRVWVFTMKNKNDVLEIFLKWKAEVENHT 475
Query: 183 GRKIKKLRSDNGGEYKSDPF 242
GRKIK L++DNGGEYKSDPF
Sbjct: 476 GRKIKVLQTDNGGEYKSDPF 495
Score = 85.9 bits (211), Expect(2) = 8e-46
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = +1
Query: 250 GIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYASHLVNRLP 423
GI RHFT+R TPQQNGV+ER+N+TL+EK CM + + L + FWAE V+YA HLVNRLP
Sbjct: 503 GIVRHFTVRKTPQQNGVSERMNKTLVEKVCCMLSNAELGREFWAEAVTYAQHLVNRLP 560
>gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium barbadense]
Length = 1034
Score = 125 bits (314), Expect(2) = 4e-45
Identities = 54/82 (65%), Positives = 69/82 (84%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
LDYVH+DVWGP++ SLGG +YFV+F+DDYSR+ WVY MK K+EVL+ F++WKK VE Q
Sbjct: 329 LDYVHSDVWGPTKVASLGGMHYFVTFVDDYSRKVWVYLMKRKNEVLDVFLKWKKMVETQA 388
Query: 183 GRKIKKLRSDNGGEYKSDPFFR 248
RK+K+LRSDNG EYK+DPF +
Sbjct: 389 DRKVKRLRSDNGTEYKNDPFLQ 410
Score = 84.0 bits (206), Expect(2) = 4e-45
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +1
Query: 235 ILSSEGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYASHLVN 414
+ EGI RHFT+R TPQQNGVAER+NRT+LEK RCM + +GL K FWAE V+Y + + N
Sbjct: 411 VCHDEGIVRHFTVRDTPQQNGVAERMNRTILEKVRCMLSNAGLGKEFWAEAVTYITMMKN 470
>gb|PKA55182.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 286
Score = 112 bits (281), Expect(2) = 2e-41
Identities = 51/79 (64%), Positives = 60/79 (75%)
Frame = +3
Query: 6 DYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQTG 185
+YVH+DVWGPS TSLGGA YFV+FIDDY R+ WVY ++HK EV EKF WK +E TG
Sbjct: 51 EYVHSDVWGPSPVTSLGGAKYFVTFIDDYLRKVWVYFLQHKSEVFEKFKYWKANIEKTTG 110
Query: 186 RKIKKLRSDNGGEYKSDPF 242
+ IK LR+DNGGEY S F
Sbjct: 111 KYIKVLRTDNGGEYTSKEF 129
Score = 84.7 bits (208), Expect(2) = 2e-41
Identities = 42/70 (60%), Positives = 49/70 (70%)
Frame = +1
Query: 214 TEESIKVILSSEGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVS 393
T + + EGI RHFTI TPQQNGVAER+NRTLLE+ RCM +GL KSFWAE V+
Sbjct: 125 TSKEFQDFCLKEGITRHFTIPNTPQQNGVAERMNRTLLERERCMRLFAGLSKSFWAESVN 184
Query: 394 YASHLVNRLP 423
+LVNR P
Sbjct: 185 TTYYLVNRSP 194
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 107 bits (266), Expect(2) = 5e-40
Identities = 47/75 (62%), Positives = 57/75 (76%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
LDY+H+D WGP + SLGG +FVS IDDYSR WVY MKHK E +KF EWK +E QT
Sbjct: 470 LDYIHSDCWGPCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQT 529
Query: 183 GRKIKKLRSDNGGEY 227
G+KIK+LR+DNG E+
Sbjct: 530 GKKIKRLRTDNGLEF 544
Score = 85.5 bits (210), Expect(2) = 5e-40
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = +1
Query: 247 EGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYASHLVNRLP 423
EGI RH T+R TPQQNGVAER+N+TLLE+ARCM + +GL + FWAE VS A +L+NR P
Sbjct: 556 EGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLINRGP 614
>gb|KYP59920.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 259
Score = 103 bits (258), Expect(2) = 2e-37
Identities = 46/80 (57%), Positives = 60/80 (75%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
LDYVH++ WGPS+ SLGG YF+S IDDYSR W++ MKHK++ + F EWK VE QT
Sbjct: 55 LDYVHSNCWGPSRVPSLGGGRYFLSIIDDYSRMTWIFIMKHKNQAFKYFKEWKILVENQT 114
Query: 183 GRKIKKLRSDNGGEYKSDPF 242
G++IK+LR+DNG E+ S F
Sbjct: 115 GKRIKRLRTDNGLEFCSAEF 134
Score = 80.1 bits (196), Expect(2) = 2e-37
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = +1
Query: 247 EGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYASHLVNRLP 423
EGI R +T+R TPQQNGVAER+NRTLLEK R + + +GL KSFWAE V+ A +LVN P
Sbjct: 141 EGIVRQYTVRNTPQQNGVAERMNRTLLEKRRYLLSNAGLTKSFWAEAVNTACYLVNGSP 199
>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 609
Score = 103 bits (256), Expect(2) = 3e-37
Identities = 46/80 (57%), Positives = 59/80 (73%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
LDYVH+D WGPS+ SLGG YF+S IDDYS W++ MKHK++ + F EWK VE QT
Sbjct: 405 LDYVHSDCWGPSRVPSLGGGRYFLSIIDDYSGMTWIFIMKHKNQAFKYFKEWKILVENQT 464
Query: 183 GRKIKKLRSDNGGEYKSDPF 242
G++IK+LR+DNG E+ S F
Sbjct: 465 GKRIKRLRTDNGLEFCSAEF 484
Score = 80.1 bits (196), Expect(2) = 3e-37
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = +1
Query: 247 EGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYASHLVNRLP 423
EGI R +T+R TPQQNGVAER+NRTLLEK R + + +GL KSFWAE V+ A +LVN P
Sbjct: 491 EGIVRQYTVRNTPQQNGVAERMNRTLLEKRRYLLSNAGLTKSFWAEAVNTACYLVNGSP 549
>gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 507
Score = 103 bits (256), Expect(2) = 3e-37
Identities = 46/80 (57%), Positives = 59/80 (73%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
LDYVH+D WGPS+ SLGG YF+S IDDYS W++ MKHK++ + F EWK VE QT
Sbjct: 303 LDYVHSDCWGPSRVPSLGGGRYFLSIIDDYSGMTWIFIMKHKNQAFKYFKEWKILVENQT 362
Query: 183 GRKIKKLRSDNGGEYKSDPF 242
G++IK+LR+DNG E+ S F
Sbjct: 363 GKRIKRLRTDNGLEFCSAEF 382
Score = 80.1 bits (196), Expect(2) = 3e-37
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = +1
Query: 247 EGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYASHLVNRLP 423
EGI R +T+R TPQQNGVAER+NRTLLEK R + + +GL KSFWAE V+ A +LVN P
Sbjct: 389 EGIVRQYTVRNTPQQNGVAERMNRTLLEKRRYLLSNAGLTKSFWAEAVNTACYLVNGSP 447
>gb|KYP68607.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1291
Score = 101 bits (251), Expect(2) = 1e-36
Identities = 46/80 (57%), Positives = 58/80 (72%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
L+ VHTDVWGP+ SLGG+ Y+V+FIDD +R+ WVY +K+K +V F WK VE QT
Sbjct: 453 LELVHTDVWGPAPVKSLGGSCYYVTFIDDATRKVWVYFLKNKSDVFSVFKRWKTEVENQT 512
Query: 183 GRKIKKLRSDNGGEYKSDPF 242
G K+K L+SDNGGEY S F
Sbjct: 513 GLKLKSLKSDNGGEYNSHEF 532
Score = 80.1 bits (196), Expect(2) = 1e-36
Identities = 39/65 (60%), Positives = 48/65 (73%)
Frame = +1
Query: 229 KVILSSEGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYASHL 408
K S GI TI GTP+QNGVAER+NRTL E+ARCM QSGLPK FWA+ ++ A++L
Sbjct: 533 KNFCSEHGIRMIKTIPGTPEQNGVAERMNRTLNERARCMRIQSGLPKVFWADAINTAAYL 592
Query: 409 VNRLP 423
+NR P
Sbjct: 593 INRGP 597
>gb|PNX62043.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 204
Score = 100 bits (249), Expect(2) = 1e-36
Identities = 45/80 (56%), Positives = 58/80 (72%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
L+ VHTDVWGP+ S+GG+ Y+++FIDD +R+ WVY +K+K +V F WK VE QT
Sbjct: 43 LELVHTDVWGPAPVKSIGGSCYYITFIDDSTRKVWVYFLKNKSDVFSVFKRWKVEVENQT 102
Query: 183 GRKIKKLRSDNGGEYKSDPF 242
G KIK L+SDNGGEY S F
Sbjct: 103 GLKIKSLKSDNGGEYDSQEF 122
Score = 80.5 bits (197), Expect(2) = 1e-36
Identities = 39/68 (57%), Positives = 49/68 (72%)
Frame = +1
Query: 220 ESIKVILSSEGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYA 399
+ K S GI TI GTP+QNGVAER+NRTL E+ARC+ QSGLPK FWAE ++ A
Sbjct: 120 QEFKDFCSEHGIRMIKTIPGTPEQNGVAERMNRTLNERARCIRIQSGLPKVFWAEAINTA 179
Query: 400 SHLVNRLP 423
++L+NR P
Sbjct: 180 AYLINRGP 187
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 95.9 bits (237), Expect(2) = 2e-36
Identities = 43/80 (53%), Positives = 58/80 (72%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
+DY H+D+WGPS S GG Y ++FIDDYSR+ WVY +K K+EVL F ++K +E QT
Sbjct: 978 VDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFKALIENQT 1037
Query: 183 GRKIKKLRSDNGGEYKSDPF 242
G+KIK+ R+DNG E+ S F
Sbjct: 1038 GKKIKRFRTDNGLEFCSGEF 1057
Score = 84.7 bits (208), Expect(2) = 2e-36
Identities = 40/60 (66%), Positives = 49/60 (81%)
Frame = +1
Query: 244 SEGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYASHLVNRLP 423
+EGI RH T+R TPQQNGVAER+NRTLLE+ARCM + +GL + FWAE V+ A +LVNR P
Sbjct: 1063 NEGIVRHRTVRRTPQQNGVAERMNRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSP 1122
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 95.9 bits (237), Expect(2) = 2e-36
Identities = 43/80 (53%), Positives = 58/80 (72%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
+DY H+D+WGPS S GG Y ++FIDDYSR+ WVY +K K+EVL F ++K +E QT
Sbjct: 999 VDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFKALIENQT 1058
Query: 183 GRKIKKLRSDNGGEYKSDPF 242
G+KIK+ R+DNG E+ S F
Sbjct: 1059 GKKIKRFRTDNGLEFCSGEF 1078
Score = 84.7 bits (208), Expect(2) = 2e-36
Identities = 40/60 (66%), Positives = 49/60 (81%)
Frame = +1
Query: 244 SEGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYASHLVNRLP 423
+EGI RH T+R TPQQNGVAER+NRTLLE+ARCM + +GL + FWAE V+ A +LVNR P
Sbjct: 1084 NEGIVRHRTVRRTPQQNGVAERMNRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSP 1143
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 96.7 bits (239), Expect(2) = 2e-36
Identities = 48/80 (60%), Positives = 58/80 (72%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
L+ VH+DVW + SLGGA YFVSFIDDYSRR WVY +K K +V F +K RVEL +
Sbjct: 472 LELVHSDVW-QAPVPSLGGAKYFVSFIDDYSRRCWVYPIKKKSDVFATFKAFKARVELDS 530
Query: 183 GRKIKKLRSDNGGEYKSDPF 242
G+KIK R+DNGGEY S+ F
Sbjct: 531 GKKIKCFRTDNGGEYTSEEF 550
Score = 84.0 bits (206), Expect(2) = 2e-36
Identities = 41/70 (58%), Positives = 48/70 (68%)
Frame = +1
Query: 214 TEESIKVILSSEGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVS 393
T E EGI+R FT+ TPQQNGVAER+NRTLLE+ R M +GL KSFWAE V+
Sbjct: 546 TSEEFDDFCKKEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRAAGLEKSFWAEAVN 605
Query: 394 YASHLVNRLP 423
A +LVNR P
Sbjct: 606 TACYLVNRAP 615
>gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna angularis]
Length = 473
Score = 98.6 bits (244), Expect(2) = 2e-36
Identities = 48/80 (60%), Positives = 58/80 (72%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
LD +H+DVW S S+GGA YFVSFIDDYSRR WVY +K K +V F E+K +VEL+T
Sbjct: 94 LDLIHSDVW-ESPEISMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELET 152
Query: 183 GRKIKKLRSDNGGEYKSDPF 242
G+ IK LR+DNGGEY F
Sbjct: 153 GKMIKCLRTDNGGEYTDGDF 172
Score = 82.0 bits (201), Expect(2) = 2e-36
Identities = 39/70 (55%), Positives = 47/70 (67%)
Frame = +1
Query: 214 TEESIKVILSSEGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVS 393
T+ EGI+R FT+ TPQQNGVAER+NRTLLE+ R M +GL KSFWAE V
Sbjct: 168 TDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTTGLAKSFWAEAVK 227
Query: 394 YASHLVNRLP 423
A +L+NR P
Sbjct: 228 TACYLINRSP 237
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 102 bits (255), Expect(2) = 5e-36
Identities = 46/76 (60%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Frame = +3
Query: 3 LDYVHTDVWGPSQN-TSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQ 179
L YVH+D+WG N SLG + YF+SF+DDYSR+ W+Y ++ K E EKFVEWKK VE Q
Sbjct: 473 LAYVHSDLWGSPHNPASLGNSQYFISFVDDYSRKVWIYFLRKKDEAFEKFVEWKKMVENQ 532
Query: 180 TGRKIKKLRSDNGGEY 227
+ RK+KKLR+DNG EY
Sbjct: 533 SDRKVKKLRTDNGLEY 548
Score = 76.3 bits (186), Expect(2) = 5e-36
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +1
Query: 247 EGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYASHLVNRLP 423
EGI RH T TPQQNG+AERLNRT+++K R M ++SG+ K FWAE S A +L+NR P
Sbjct: 560 EGIVRHKTCAYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSP 618
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gb|AAL75759.1| Putative pol polyprotein [Oryza sativa Japonica Group]
gb|AAP51772.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1005
Score = 102 bits (254), Expect(2) = 6e-36
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
LDYVH D+WGPS SLGGA Y ++ IDD+SR+ W Y +KHK + F EWK +E QT
Sbjct: 222 LDYVHADLWGPSHKPSLGGARYMLTIIDDHSRKVWPYFLKHKDDTFAAFKEWKVMIERQT 281
Query: 183 GRKIKKLRSDNGGEYKSDPF 242
+++K LR+DNGGE+ SD F
Sbjct: 282 EKEVKVLRTDNGGEFCSDAF 301
Score = 76.3 bits (186), Expect(2) = 6e-36
Identities = 34/59 (57%), Positives = 44/59 (74%)
Frame = +1
Query: 247 EGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYASHLVNRLP 423
EGI RH+TI TPQQNGVAER+NRT++ KA CM + + + K FWAE + A +L+NR P
Sbjct: 308 EGIVRHYTIPYTPQQNGVAERMNRTIISKAHCMLSNARMNKRFWAEAANTACYLINRSP 366
>gb|KYP69055.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 264
Score = 97.8 bits (242), Expect(2) = 8e-36
Identities = 42/80 (52%), Positives = 57/80 (71%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
LDY+H+D WGPSQ SLG YF+S +DDYSR W++ MKHK++ + F EWK +E QT
Sbjct: 105 LDYIHSDCWGPSQLPSLGRGMYFLSIMDDYSRMTWIFIMKHKNQAFKCFKEWKILMEKQT 164
Query: 183 GRKIKKLRSDNGGEYKSDPF 242
+ +K+LR+DNG E+ S F
Sbjct: 165 SKMVKRLRTDNGLEFGSKEF 184
Score = 80.5 bits (197), Expect(2) = 8e-36
Identities = 35/60 (58%), Positives = 47/60 (78%)
Frame = +1
Query: 244 SEGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYASHLVNRLP 423
+EGI R +++R TPQQNGV ER+NRTLLE+ARC+ + + L +SFW E VS A +L+NR P
Sbjct: 190 AEGIARQYSVRNTPQQNGVVERMNRTLLERARCLLSNARLSRSFWVEAVSTACYLINRSP 249
>dbj|GAU46320.1| hypothetical protein TSUD_401910 [Trifolium subterraneum]
Length = 1006
Score = 95.9 bits (237), Expect(2) = 4e-35
Identities = 42/79 (53%), Positives = 58/79 (73%)
Frame = +3
Query: 6 DYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQTG 185
+YVH+D+WGP+ + GG +YF+S IDDYSRR WV+ +K+K +V EKF EW +E Q G
Sbjct: 303 EYVHSDLWGPASVPTHGGGSYFLSIIDDYSRRVWVHIIKNKSDVFEKFKEWHTLIENQIG 362
Query: 186 RKIKKLRSDNGGEYKSDPF 242
K+K LR+DNG E+ S+ F
Sbjct: 363 TKLKVLRTDNGLEFVSEQF 381
Score = 80.1 bits (196), Expect(2) = 4e-35
Identities = 37/68 (54%), Positives = 48/68 (70%)
Frame = +1
Query: 220 ESIKVILSSEGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYA 399
E +GI+RH T+ TPQQNG+AER+NRTLLE+ R M +GLPKSFW E V+ A
Sbjct: 379 EQFNEFCRKKGIKRHRTVAYTPQQNGLAERMNRTLLERVRYMLLGAGLPKSFWGEAVNTA 438
Query: 400 SHLVNRLP 423
++L+NR P
Sbjct: 439 AYLINRCP 446
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAT44170.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1175
Score = 100 bits (249), Expect(2) = 1e-34
Identities = 43/80 (53%), Positives = 57/80 (71%)
Frame = +3
Query: 3 LDYVHTDVWGPSQNTSLGGANYFVSFIDDYSRRNWVYTMKHKHEVLEKFVEWKKRVELQT 182
LDYVH D+WGPS+ SLGGA Y ++ IDDYSR+ W Y +KHK + F EWK ++ QT
Sbjct: 380 LDYVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIKRQT 439
Query: 183 GRKIKKLRSDNGGEYKSDPF 242
+++K LR+DNGG + SD F
Sbjct: 440 EKEVKVLRTDNGGGFCSDAF 459
Score = 73.9 bits (180), Expect(2) = 1e-34
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +1
Query: 247 EGIERHFTIRGTPQQNGVAERLNRTLLEKARCMFTQSGLPKSFWAEMVSYASHLVNRLP 423
EGI H TI TPQQNGVAER+NRT++ KARCM + + + K FWAE A +L+NR P
Sbjct: 466 EGIVMHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAAKTACYLINRSP 524