BLASTX nr result

ID: Ophiopogon23_contig00002472 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00002472
         (369 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020253087.1| thioredoxin M-type, chloroplastic-like [Aspa...    56   4e-07

>ref|XP_020253087.1| thioredoxin M-type, chloroplastic-like [Asparagus officinalis]
 gb|ONK77416.1| uncharacterized protein A4U43_C02F6300 [Asparagus officinalis]
          Length = 180

 Score = 56.2 bits (134), Expect = 4e-07
 Identities = 39/82 (47%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
 Frame = -2

Query: 230 MALE-ACFQVXXXXXXXXXXXTKSGCLSP-YPFPHKEKLNFRSKRPMPSMSVSTSLS--- 66
           MALE ACFQV                L+P +P PHKE+L  R KR + S   +TS S   
Sbjct: 1   MALELACFQVSTISSSSTPNK-----LNPNHPSPHKERLGLRPKRSISSFLTTTSSSSFK 55

Query: 65  -FKSLRRGRRFVCEAKNAVDGV 3
            ++S  R  RFVCEAKNAVDGV
Sbjct: 56  HYQSNARANRFVCEAKNAVDGV 77


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