BLASTX nr result
ID: Ophiopogon23_contig00002245
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00002245
(527 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AIZ68181.1| E3 ubiquitin-protein ligase RING1-like protein [O... 85 3e-16
ref|XP_020254619.1| probable E3 ubiquitin-protein ligase RHC1A [... 65 3e-09
ref|XP_008786879.1| PREDICTED: probable E3 ubiquitin-protein lig... 60 3e-07
ref|XP_010931555.1| PREDICTED: probable E3 ubiquitin-protein lig... 57 2e-06
ref|XP_020101273.1| probable E3 ubiquitin-protein ligase RHC1A [... 57 3e-06
ref|XP_008788576.1| PREDICTED: probable E3 ubiquitin-protein lig... 56 4e-06
ref|XP_015873380.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 55 8e-06
>gb|AIZ68181.1| E3 ubiquitin-protein ligase RING1-like protein [Ornithogalum
longebracteatum]
Length = 334
Score = 84.7 bits (208), Expect = 3e-16
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = +1
Query: 1 SNIWPFRSSNSGTSSQQNAYPRQNDHTRQNETAGSSAAVSEDSINEMSYSGWPFDY 168
S +WPFR+SNSGT+SQQN YP QN + +NE A SSAA+ +DSINEM YSGWPFDY
Sbjct: 280 SYLWPFRTSNSGTASQQNEYPHQNRYPSRNE-ASSSAALHDDSINEMGYSGWPFDY 334
>ref|XP_020254619.1| probable E3 ubiquitin-protein ligase RHC1A [Asparagus officinalis]
ref|XP_020254620.1| probable E3 ubiquitin-protein ligase RHC1A [Asparagus officinalis]
gb|ONK78467.1| uncharacterized protein A4U43_C02F19080 [Asparagus officinalis]
Length = 316
Score = 65.1 bits (157), Expect = 3e-09
Identities = 33/56 (58%), Positives = 36/56 (64%)
Frame = +1
Query: 1 SNIWPFRSSNSGTSSQQNAYPRQNDHTRQNETAGSSAAVSEDSINEMSYSGWPFDY 168
S +WPF +SNSG N TRQ+ G SA VSEDSINEMSYSGWPFDY
Sbjct: 272 SYLWPFGASNSG-----------NTTTRQSGAGGGSAGVSEDSINEMSYSGWPFDY 316
>ref|XP_008786879.1| PREDICTED: probable E3 ubiquitin-protein ligase RHC1A [Phoenix
dactylifera]
ref|XP_008786880.1| PREDICTED: probable E3 ubiquitin-protein ligase RHC1A [Phoenix
dactylifera]
Length = 324
Score = 59.7 bits (143), Expect = 3e-07
Identities = 30/56 (53%), Positives = 35/56 (62%)
Frame = +1
Query: 1 SNIWPFRSSNSGTSSQQNAYPRQNDHTRQNETAGSSAAVSEDSINEMSYSGWPFDY 168
S +WPFRSSN P N H QNE+ GSS+A + IN+MSYSGWPFDY
Sbjct: 281 SFLWPFRSSN----------PSSNSH--QNESGGSSSAAVHEDINQMSYSGWPFDY 324
>ref|XP_010931555.1| PREDICTED: probable E3 ubiquitin-protein ligase RHC1A [Elaeis
guineensis]
ref|XP_010931556.1| PREDICTED: probable E3 ubiquitin-protein ligase RHC1A [Elaeis
guineensis]
Length = 324
Score = 57.0 bits (136), Expect = 2e-06
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = +1
Query: 1 SNIWPFRSSNSGTSSQQNAYPRQNDHTRQNETAGSSAAVSEDSINEMSYSGWPFDY 168
S +WPFRSSNS ++S QN E+ GSS+A + IN+M Y+GWPFDY
Sbjct: 281 SFLWPFRSSNSSSNSHQN------------ESGGSSSAAVHEDINQMHYTGWPFDY 324
>ref|XP_020101273.1| probable E3 ubiquitin-protein ligase RHC1A [Ananas comosus]
ref|XP_020101275.1| probable E3 ubiquitin-protein ligase RHC1A [Ananas comosus]
ref|XP_020101276.1| probable E3 ubiquitin-protein ligase RHC1A [Ananas comosus]
ref|XP_020101277.1| probable E3 ubiquitin-protein ligase RHC1A [Ananas comosus]
ref|XP_020101278.1| probable E3 ubiquitin-protein ligase RHC1A [Ananas comosus]
ref|XP_020101279.1| probable E3 ubiquitin-protein ligase RHC1A [Ananas comosus]
ref|XP_020101280.1| probable E3 ubiquitin-protein ligase RHC1A [Ananas comosus]
Length = 330
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/63 (44%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Frame = +1
Query: 1 SNIWPFRSSNS-------GTSSQQNAYPRQNDHTRQNETAGSSAAVSEDSINEMSYSGWP 159
S WPFRS NS G +S + + Q AG S+A D IN+MSYSGWP
Sbjct: 268 SFFWPFRSPNSRFQSSDSGFNSNSGFHSNSGSNNYQQNNAGGSSAAVHDDINQMSYSGWP 327
Query: 160 FDY 168
FDY
Sbjct: 328 FDY 330
>ref|XP_008788576.1| PREDICTED: probable E3 ubiquitin-protein ligase RHC1A [Phoenix
dactylifera]
ref|XP_008788577.1| PREDICTED: probable E3 ubiquitin-protein ligase RHC1A [Phoenix
dactylifera]
ref|XP_008788578.1| PREDICTED: probable E3 ubiquitin-protein ligase RHC1A [Phoenix
dactylifera]
Length = 326
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = +1
Query: 1 SNIWPFRSSNSGTSSQQNAYPRQNDHTRQNETAGSSAAVSEDSINEMSYSGWPFDY 168
S +WPFR SNS +SS +N E+ GSS+A + +N+MSYSGWPFDY
Sbjct: 283 SFLWPFRYSNSSSSSHRN------------ESGGSSSASVHEDVNQMSYSGWPFDY 326
>ref|XP_015873380.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba]
ref|XP_015873381.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba]
ref|XP_015873382.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba]
ref|XP_015873383.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba]
Length = 337
Score = 55.5 bits (132), Expect = 8e-06
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +1
Query: 1 SNIWPFRSSNSGTSSQQNAYPRQNDHTRQN---ETAGSSAAVSEDSINEMSYSGWPFDY 168
S +WPFRSSNS + A Q T ET GSS++ + + +EM YSGWPFDY
Sbjct: 279 SYLWPFRSSNSNSRQYGEANSHQYGETNNRQYGETGGSSSSATHEPNHEMGYSGWPFDY 337