BLASTX nr result

ID: Ophiopogon23_contig00002238 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00002238
         (532 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010934329.1| PREDICTED: small nuclear ribonucleoprotein S...   211   7e-68
ref|XP_008791570.1| PREDICTED: small nuclear ribonucleoprotein S...   210   1e-67
ref|XP_008785258.1| PREDICTED: small nuclear ribonucleoprotein S...   210   2e-67
ref|XP_018858297.1| PREDICTED: small nuclear ribonucleoprotein S...   207   1e-66
ref|XP_014494508.1| small nuclear ribonucleoprotein Sm D2 [Vigna...   207   1e-66
ref|XP_020253260.1| probable small nuclear ribonucleoprotein Sm ...   207   2e-66
gb|PHT38721.1| putative small nuclear ribonucleoprotein Sm D2, p...   207   3e-66
ref|XP_016565771.1| PREDICTED: small nuclear ribonucleoprotein S...   207   3e-66
ref|XP_020251965.1| small nuclear ribonucleoprotein Sm D2-like [...   206   4e-66
gb|ONK81597.1| uncharacterized protein A4U43_C01F30950 [Asparagu...   207   4e-66
gb|PKA47549.1| hypothetical protein AXF42_Ash014745 [Apostasia s...   206   7e-66
ref|XP_010523951.1| PREDICTED: small nuclear ribonucleoprotein S...   206   8e-66
ref|XP_024010712.1| small nuclear ribonucleoprotein Sm D2 isofor...   205   1e-65
ref|XP_017431318.1| PREDICTED: small nuclear ribonucleoprotein S...   205   1e-65
ref|XP_013711680.1| small nuclear ribonucleoprotein Sm D2-like [...   205   1e-65
ref|XP_007131373.1| hypothetical protein PHAVU_011G008300g [Phas...   205   1e-65
ref|XP_006397962.1| small nuclear ribonucleoprotein Sm D2 isofor...   205   1e-65
ref|XP_002878480.1| small nuclear ribonucleoprotein Sm D2 isofor...   205   1e-65
ref|NP_566107.1| Small nuclear ribonucleoprotein family protein ...   205   1e-65
ref|XP_018485753.1| PREDICTED: small nuclear ribonucleoprotein S...   205   1e-65

>ref|XP_010934329.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform X2 [Elaeis
           guineensis]
 ref|XP_010934330.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform X2 [Elaeis
           guineensis]
 ref|XP_019709389.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform X2 [Elaeis
           guineensis]
          Length = 105

 Score =  211 bits (536), Expect = 7e-68
 Identities = 103/105 (98%), Positives = 104/105 (99%)
 Frame = +3

Query: 45  MEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 224
           MEDD +AGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 1   MEDDTNAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 60

Query: 225 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 105


>ref|XP_008791570.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Phoenix
           dactylifera]
 ref|XP_008791571.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Phoenix
           dactylifera]
 ref|XP_010920461.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 [Elaeis
           guineensis]
          Length = 105

 Score =  210 bits (535), Expect = 1e-67
 Identities = 102/105 (97%), Positives = 104/105 (99%)
 Frame = +3

Query: 45  MEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 224
           MEDD +AGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 1   MEDDTNAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 60

Query: 225 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           VREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  VREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 105


>ref|XP_008785258.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Phoenix
           dactylifera]
          Length = 105

 Score =  210 bits (534), Expect = 2e-67
 Identities = 101/105 (96%), Positives = 104/105 (99%)
 Frame = +3

Query: 45  MEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 224
           MEDD +AGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 1   MEDDTNAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 60

Query: 225 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           VREMWTE+PKTGKGKKKALP+NKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  VREMWTEIPKTGKGKKKALPINKDRFISKMFLRGDSVIIVLRNPK 105


>ref|XP_018858297.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 [Juglans regia]
          Length = 109

 Score =  207 bits (528), Expect = 1e-66
 Identities = 101/106 (95%), Positives = 104/106 (98%)
 Frame = +3

Query: 42  PMEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 221
           PM++DA+AGK EEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE
Sbjct: 4   PMDEDATAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 63

Query: 222 NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           NVREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 64  NVREMWTEVPKTGKGKKKAHPVNKDRFISKMFLRGDSVIIVLRNPK 109


>ref|XP_014494508.1| small nuclear ribonucleoprotein Sm D2 [Vigna radiata var. radiata]
          Length = 109

 Score =  207 bits (528), Expect = 1e-66
 Identities = 101/106 (95%), Positives = 103/106 (97%)
 Frame = +3

Query: 42  PMEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 221
           PME+D +AGK EEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE
Sbjct: 4   PMEEDTAAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 63

Query: 222 NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           NVREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 64  NVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 109


>ref|XP_020253260.1| probable small nuclear ribonucleoprotein Sm D2 [Asparagus
           officinalis]
 gb|ONK77583.1| uncharacterized protein A4U43_C02F8140 [Asparagus officinalis]
          Length = 105

 Score =  207 bits (527), Expect = 2e-66
 Identities = 101/105 (96%), Positives = 103/105 (98%)
 Frame = +3

Query: 45  MEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 224
           MEDDA+A KKEEEEFNTGPLSVL MSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 1   MEDDANAAKKEEEEFNTGPLSVLAMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 60

Query: 225 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           VREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  VREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 105


>gb|PHT38721.1| putative small nuclear ribonucleoprotein Sm D2, partial [Capsicum
           baccatum]
 gb|PHT86112.1| Small nuclear ribonucleoprotein Sm D2, partial [Capsicum annuum]
 gb|PHU21963.1| putative small nuclear ribonucleoprotein Sm D2, partial [Capsicum
           chinense]
          Length = 108

 Score =  207 bits (526), Expect = 3e-66
 Identities = 100/106 (94%), Positives = 103/106 (97%)
 Frame = +3

Query: 42  PMEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 221
           PME+D + GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLE
Sbjct: 3   PMEEDTAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLE 62

Query: 222 NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 63  NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 108


>ref|XP_016565771.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform X1
           [Capsicum annuum]
          Length = 109

 Score =  207 bits (526), Expect = 3e-66
 Identities = 100/106 (94%), Positives = 103/106 (97%)
 Frame = +3

Query: 42  PMEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 221
           PME+D + GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLE
Sbjct: 4   PMEEDTAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLE 63

Query: 222 NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 64  NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 109


>ref|XP_020251965.1| small nuclear ribonucleoprotein Sm D2-like [Asparagus officinalis]
 ref|XP_020251966.1| small nuclear ribonucleoprotein Sm D2-like [Asparagus officinalis]
          Length = 105

 Score =  206 bits (525), Expect = 4e-66
 Identities = 102/105 (97%), Positives = 102/105 (97%)
 Frame = +3

Query: 45  MEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 224
           MEDDA A KKEEEEFNTGPLSVL MSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 1   MEDDAIAAKKEEEEFNTGPLSVLAMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 60

Query: 225 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 105


>gb|ONK81597.1| uncharacterized protein A4U43_C01F30950 [Asparagus officinalis]
          Length = 140

 Score =  207 bits (528), Expect = 4e-66
 Identities = 103/107 (96%), Positives = 103/107 (96%)
 Frame = +3

Query: 39  VPMEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVL 218
           V MEDDA A KKEEEEFNTGPLSVL MSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVL
Sbjct: 34  VQMEDDAIAAKKEEEEFNTGPLSVLAMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVL 93

Query: 219 ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 94  ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 140


>gb|PKA47549.1| hypothetical protein AXF42_Ash014745 [Apostasia shenzhenica]
          Length = 105

 Score =  206 bits (523), Expect = 7e-66
 Identities = 100/105 (95%), Positives = 102/105 (97%)
 Frame = +3

Query: 45  MEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 224
           M DDA AGKKEEEEFNTGPLS+LMMSVK NTQVLINCRNN+KLLGRVRAFDRHCNMVLEN
Sbjct: 1   MADDADAGKKEEEEFNTGPLSILMMSVKQNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 60

Query: 225 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 105


>ref|XP_010523951.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform X1
           [Tarenaya hassleriana]
          Length = 109

 Score =  206 bits (523), Expect = 8e-66
 Identities = 99/106 (93%), Positives = 103/106 (97%)
 Frame = +3

Query: 42  PMEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 221
           PME+D + GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLE
Sbjct: 4   PMEEDTNQGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLE 63

Query: 222 NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           NVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 64  NVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 109


>ref|XP_024010712.1| small nuclear ribonucleoprotein Sm D2 isoform X3 [Eutrema
           salsugineum]
          Length = 108

 Score =  205 bits (522), Expect = 1e-65
 Identities = 99/106 (93%), Positives = 103/106 (97%)
 Frame = +3

Query: 42  PMEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 221
           PME+D + GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLE
Sbjct: 3   PMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLE 62

Query: 222 NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           NVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 63  NVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 108


>ref|XP_017431318.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Vigna
           angularis]
          Length = 109

 Score =  205 bits (522), Expect = 1e-65
 Identities = 100/106 (94%), Positives = 102/106 (96%)
 Frame = +3

Query: 42  PMEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 221
           PME+D +AGK EEEEFNTGPLSVLM SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE
Sbjct: 4   PMEEDTAAGKNEEEEFNTGPLSVLMTSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 63

Query: 222 NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           NVREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 64  NVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 109


>ref|XP_013711680.1| small nuclear ribonucleoprotein Sm D2-like [Brassica napus]
          Length = 109

 Score =  205 bits (522), Expect = 1e-65
 Identities = 99/106 (93%), Positives = 103/106 (97%)
 Frame = +3

Query: 42  PMEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 221
           PME+D + GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLE
Sbjct: 4   PMEEDTNLGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLE 63

Query: 222 NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           NVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 64  NVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 109


>ref|XP_007131373.1| hypothetical protein PHAVU_011G008300g [Phaseolus vulgaris]
 gb|ESW03367.1| hypothetical protein PHAVU_011G008300g [Phaseolus vulgaris]
          Length = 109

 Score =  205 bits (522), Expect = 1e-65
 Identities = 100/106 (94%), Positives = 102/106 (96%)
 Frame = +3

Query: 42  PMEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 221
           PME+D +A K EEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE
Sbjct: 4   PMEEDTAAAKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 63

Query: 222 NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           NVREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 64  NVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 109


>ref|XP_006397962.1| small nuclear ribonucleoprotein Sm D2 isoform X1 [Eutrema
           salsugineum]
 ref|XP_009116945.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform X1
           [Brassica rapa]
 ref|XP_013634316.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform X1
           [Brassica oleracea var. oleracea]
 ref|XP_013604328.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform X1
           [Brassica oleracea var. oleracea]
 ref|XP_013604330.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform X1
           [Brassica oleracea var. oleracea]
 ref|XP_013648519.1| small nuclear ribonucleoprotein Sm D2-like isoform X1 [Brassica
           napus]
 ref|XP_013671901.1| small nuclear ribonucleoprotein Sm D2-like isoform X1 [Brassica
           napus]
 ref|XP_013716807.1| small nuclear ribonucleoprotein Sm D2-like isoform X1 [Brassica
           napus]
 ref|XP_013731563.1| small nuclear ribonucleoprotein Sm D2-like isoform X1 [Brassica
           napus]
 ref|XP_018485022.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform X1
           [Raphanus sativus]
 ref|XP_018485755.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform X3
           [Raphanus sativus]
 ref|XP_018490541.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform X3
           [Raphanus sativus]
 gb|ESQ39413.1| hypothetical protein EUTSA_v10001688mg [Eutrema salsugineum]
 gb|ESQ39415.1| hypothetical protein EUTSA_v10001688mg [Eutrema salsugineum]
          Length = 109

 Score =  205 bits (522), Expect = 1e-65
 Identities = 99/106 (93%), Positives = 103/106 (97%)
 Frame = +3

Query: 42  PMEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 221
           PME+D + GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLE
Sbjct: 4   PMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLE 63

Query: 222 NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           NVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 64  NVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 109


>ref|XP_002878480.1| small nuclear ribonucleoprotein Sm D2 isoform X1 [Arabidopsis
           lyrata subsp. lyrata]
 gb|EFH54739.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 109

 Score =  205 bits (522), Expect = 1e-65
 Identities = 99/106 (93%), Positives = 103/106 (97%)
 Frame = +3

Query: 42  PMEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 221
           PME+D + GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLE
Sbjct: 4   PMEEDTTQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLE 63

Query: 222 NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           NVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 64  NVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 109


>ref|NP_566107.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
           thaliana]
 ref|NP_001078076.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
           thaliana]
 ref|NP_567134.3| Small nuclear ribonucleoprotein family protein [Arabidopsis
           thaliana]
 ref|XP_006295280.1| small nuclear ribonucleoprotein Sm D2 isoform X1 [Capsella rubella]
 ref|XP_010506804.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform X1
           [Camelina sativa]
 ref|XP_010507866.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform X1
           [Camelina sativa]
 ref|XP_010518475.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform X3
           [Camelina sativa]
 ref|XP_010518478.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform X3
           [Camelina sativa]
 ref|XP_020883169.1| small nuclear ribonucleoprotein Sm D2 isoform X1 [Arabidopsis
           lyrata subsp. lyrata]
 ref|XP_020883170.1| small nuclear ribonucleoprotein Sm D2 isoform X1 [Arabidopsis
           lyrata subsp. lyrata]
 gb|AAM14847.1| putative small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
 gb|AAC63620.2| putative small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
 gb|AEC10867.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
           thaliana]
 gb|AEC10870.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
           thaliana]
 gb|AEE80400.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
           thaliana]
 gb|EOA28178.1| hypothetical protein CARUB_v10024367mg [Capsella rubella]
 gb|OAP10825.1| hypothetical protein AXX17_AT2G45430 [Arabidopsis thaliana]
          Length = 109

 Score =  205 bits (522), Expect = 1e-65
 Identities = 99/106 (93%), Positives = 103/106 (97%)
 Frame = +3

Query: 42  PMEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 221
           PME+D + GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLE
Sbjct: 4   PMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLE 63

Query: 222 NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           NVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 64  NVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 109


>ref|XP_018485753.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform X1
           [Raphanus sativus]
 ref|XP_018490538.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform X1
           [Raphanus sativus]
 ref|XP_018445228.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform X1
           [Raphanus sativus]
 ref|XP_018460349.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform X1
           [Raphanus sativus]
          Length = 110

 Score =  205 bits (522), Expect = 1e-65
 Identities = 99/106 (93%), Positives = 103/106 (97%)
 Frame = +3

Query: 42  PMEDDASAGKKEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE 221
           PME+D + GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLE
Sbjct: 5   PMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLE 64

Query: 222 NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 359
           NVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 65  NVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 110


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