BLASTX nr result

ID: Ophiopogon23_contig00001956 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00001956
         (383 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020265974.1| uncharacterized protein LOC109841419 isoform...    81   3e-15
ref|XP_020265973.1| uncharacterized protein LOC109841419 isoform...    81   4e-15
gb|PKA50663.1| Cleavage and polyadenylation specificity factor C...    54   9e-06

>ref|XP_020265974.1| uncharacterized protein LOC109841419 isoform X2 [Asparagus
           officinalis]
          Length = 570

 Score = 80.9 bits (198), Expect = 3e-15
 Identities = 39/68 (57%), Positives = 50/68 (73%)
 Frame = +1

Query: 178 MEPLNTSATDAEENSANAQNLTEQLHSVKGDDIMPDNVSQDANNVDVSRDTTCELGTSDG 357
           ME LN S   A+E  A+++NL EQ  SVK + ++PDNVSQDANNVD SRDT+ +LG  DG
Sbjct: 25  MELLNASPVGAKEKPASSENLIEQTLSVKDEKLVPDNVSQDANNVDASRDTSSQLGPLDG 84

Query: 358 SGDCNTVN 381
           S DC+ +N
Sbjct: 85  SRDCSDIN 92


>ref|XP_020265973.1| uncharacterized protein LOC109841419 isoform X1 [Asparagus
           officinalis]
          Length = 695

 Score = 80.9 bits (198), Expect = 4e-15
 Identities = 39/68 (57%), Positives = 50/68 (73%)
 Frame = +1

Query: 178 MEPLNTSATDAEENSANAQNLTEQLHSVKGDDIMPDNVSQDANNVDVSRDTTCELGTSDG 357
           ME LN S   A+E  A+++NL EQ  SVK + ++PDNVSQDANNVD SRDT+ +LG  DG
Sbjct: 25  MELLNASPVGAKEKPASSENLIEQTLSVKDEKLVPDNVSQDANNVDASRDTSSQLGPLDG 84

Query: 358 SGDCNTVN 381
           S DC+ +N
Sbjct: 85  SRDCSDIN 92


>gb|PKA50663.1| Cleavage and polyadenylation specificity factor CPSF30 [Apostasia
           shenzhenica]
          Length = 648

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = +1

Query: 175 SMEPLNTSATDAEENSANAQNLTEQLHSVKGDDIMPDNVSQDANNVDVSRDTTCE-LGTS 351
           +MEPLN SA DA ENS++ +N+ ++ HS K D  +  NVS D+N +D  +D   E L TS
Sbjct: 13  AMEPLNLSALDAIENSSSIENIKDESHSCKDDKTVDSNVSHDSNAMDPLQDAVLESLDTS 72

Query: 352 DGSG 363
              G
Sbjct: 73  VDGG 76


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