BLASTX nr result

ID: Ophiopogon23_contig00001736 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00001736
         (620 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020265987.1| YTH domain-containing family protein 1-like ...    43   4e-06
ref|XP_020265990.1| YTH domain-containing family protein 1-like ...    43   4e-06

>ref|XP_020265987.1| YTH domain-containing family protein 1-like isoform X1 [Asparagus
           officinalis]
 ref|XP_020265988.1| YTH domain-containing family protein 1-like isoform X2 [Asparagus
           officinalis]
 ref|XP_020265989.1| YTH domain-containing family protein 1-like isoform X1 [Asparagus
           officinalis]
          Length = 692

 Score = 42.7 bits (99), Expect(2) = 4e-06
 Identities = 25/64 (39%), Positives = 36/64 (56%)
 Frame = -1

Query: 593 LTAEAMLADRKHQKSVDNDGPIDQRVCSKPDTIQPSEDKDDVNLNQKGDANVASSVTEMK 414
           L A+  L + KH KS  +DGPI+       D ++      D+N ++K DAN  SSV +MK
Sbjct: 566 LNADVELTEFKHNKSSGSDGPIEL------DALESLNAVKDLNPDKKEDANYLSSVMKMK 619

Query: 413 SLAI 402
           SL +
Sbjct: 620 SLPL 623



 Score = 35.8 bits (81), Expect(2) = 4e-06
 Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = -2

Query: 346 IKVNGTAVATSNAIAIGSIPVEPKAVKL-ENKGATSEGNSSPK 221
           IKVNGTA A S    IGS  +E K +KL +NKG  SE ++S K
Sbjct: 651 IKVNGTAEAASEVTNIGS-TIESKTMKLDDNKGPISEDSASLK 692


>ref|XP_020265990.1| YTH domain-containing family protein 1-like isoform X3 [Asparagus
           officinalis]
          Length = 676

 Score = 42.7 bits (99), Expect(2) = 4e-06
 Identities = 25/64 (39%), Positives = 36/64 (56%)
 Frame = -1

Query: 593 LTAEAMLADRKHQKSVDNDGPIDQRVCSKPDTIQPSEDKDDVNLNQKGDANVASSVTEMK 414
           L A+  L + KH KS  +DGPI+       D ++      D+N ++K DAN  SSV +MK
Sbjct: 550 LNADVELTEFKHNKSSGSDGPIEL------DALESLNAVKDLNPDKKEDANYLSSVMKMK 603

Query: 413 SLAI 402
           SL +
Sbjct: 604 SLPL 607



 Score = 35.8 bits (81), Expect(2) = 4e-06
 Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = -2

Query: 346 IKVNGTAVATSNAIAIGSIPVEPKAVKL-ENKGATSEGNSSPK 221
           IKVNGTA A S    IGS  +E K +KL +NKG  SE ++S K
Sbjct: 635 IKVNGTAEAASEVTNIGS-TIESKTMKLDDNKGPISEDSASLK 676


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