BLASTX nr result
ID: Ophiopogon23_contig00001520
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00001520
(522 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|POE79026.1| ribonuclease h [Quercus suber] 60 2e-08
ref|WP_028986336.1| ribonuclease H [Thermicanus aegyptius] 59 2e-07
emb|CCQ98285.1| Ribonuclease H [[Clostridium] ultunense Esp] 59 2e-07
ref|WP_068779216.1| ribonuclease H [Paenibacillus sp. GM2] 59 3e-07
ref|WP_020618607.1| hypothetical protein [Paenibacillus daejeone... 58 6e-07
ref|WP_068657145.1| ribonuclease H [Paenibacillus crassostreae] ... 57 1e-06
ref|WP_091180831.1| ribonuclease H [Paenibacillus catalpae] >gi|... 57 1e-06
ref|WP_015845420.1| ribonuclease H [Paenibacillus sp. JDR-2] >gi... 57 2e-06
emb|CAN79317.1| hypothetical protein VITISV_008344 [Vitis vinifera] 55 2e-06
gb|OUY04614.1| hypothetical protein CBB67_04605 [Alteromonadacea... 54 2e-06
emb|SHE12540.1| Ribonuclease H [Chlamydia abortus] 56 2e-06
ref|WP_080833399.1| ribonuclease H [Cohnella sp. 6021052837] 56 2e-06
ref|WP_019007846.1| hypothetical protein [Cohnella laeviribosi] 56 3e-06
ref|WP_068650817.1| ribonuclease H [Paenibacillus antarcticus] >... 56 3e-06
ref|WP_068580038.1| ribonuclease H [Paenibacillus macquariensis]... 56 3e-06
ref|WP_068601073.1| ribonuclease H [Paenibacillus macquariensis]... 56 3e-06
gb|ANY74285.1| ribonuclease H [Paenibacillus ihbetae] 56 3e-06
ref|WP_077568241.1| ribonuclease H [Paenibacillus ihbetae] >gi|1... 56 3e-06
ref|WP_007131775.1| ribonuclease H [Paenibacillus lactis] >gi|35... 56 3e-06
gb|KZV32949.1| hypothetical protein F511_01460 [Dorcoceras hygro... 55 3e-06
>gb|POE79026.1| ribonuclease h [Quercus suber]
Length = 151
Score = 60.5 bits (145), Expect = 2e-08
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +3
Query: 258 TYVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFMEYW 401
TYVVFVGR PG++ W E QVH+YS A +K F EVE+AFM++W
Sbjct: 12 TYVVFVGRVPGVYDTWEEACAQVHQYSGADHKAFKHKMEVEVAFMKFW 59
>ref|WP_028986336.1| ribonuclease H [Thermicanus aegyptius]
Length = 218
Score = 59.3 bits (142), Expect = 2e-07
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFME 395
YVV+ GRRPG++ W EC EQ+H + A YK FST EE E A+ E
Sbjct: 7 YVVWKGRRPGIYTRWEECKEQIHHFPGARYKSFSTKEEAERAYKE 51
>emb|CCQ98285.1| Ribonuclease H [[Clostridium] ultunense Esp]
Length = 218
Score = 59.3 bits (142), Expect = 2e-07
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFME 395
YVV+ GRRPG++ W EC EQ+H + A YK FST EE E A+ E
Sbjct: 7 YVVWKGRRPGIYTRWEECKEQIHHFPGARYKSFSTKEEAERAYKE 51
>ref|WP_068779216.1| ribonuclease H [Paenibacillus sp. GM2]
Length = 214
Score = 58.5 bits (140), Expect = 3e-07
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFME----YWGYSSLEVP 425
YVV+ GRRPG++ W EC Q ++Y A YK + +Y+E E AF E +WG S P
Sbjct: 7 YVVWAGRRPGIYHTWAECQAQTNQYVDAKYKSYHSYKEAEQAFQEGWHKHWGQKSTAKP 65
>ref|WP_020618607.1| hypothetical protein [Paenibacillus daejeonensis]
Length = 215
Score = 57.8 bits (138), Expect = 6e-07
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFMEYW 401
YVV+ G++PG++ NWP+C +QV+ Y+ A YK F+T E E A+ + W
Sbjct: 7 YVVWQGKQPGIYTNWPDCQKQVNGYTDAKYKSFATKAEAEQAYQKGW 53
>ref|WP_068657145.1| ribonuclease H [Paenibacillus crassostreae]
gb|OAB75530.1| ribonuclease H [Paenibacillus crassostreae]
gb|AOZ92601.1| ribonuclease H [Paenibacillus crassostreae]
Length = 218
Score = 57.0 bits (136), Expect = 1e-06
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFMEYW 401
YVV+VG PG++ NWPEC QV ++ A YK F + E E A+ E W
Sbjct: 7 YVVWVGNNPGIYTNWPECQSQVAQFKDAKYKSFDSKAEAERAYQEGW 53
>ref|WP_091180831.1| ribonuclease H [Paenibacillus catalpae]
emb|SFD60216.1| ribonuclease HI [Paenibacillus catalpae]
Length = 225
Score = 57.0 bits (136), Expect = 1e-06
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFMEYW 401
YVV+VG++PG++ +WPEC QV+ Y +A YK F + ++ E A+ E W
Sbjct: 7 YVVWVGKQPGVYKSWPECQSQVNGYPEAKYKSFESRDKAEAAYKEGW 53
>ref|WP_015845420.1| ribonuclease H [Paenibacillus sp. JDR-2]
gb|ACT02480.1| ribonuclease H-related protein [Paenibacillus sp. JDR-2]
Length = 225
Score = 56.6 bits (135), Expect = 2e-06
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFMEYW 401
YVV+VG++PG++ +WPEC QV+ Y +A YK F + ++ E A+ E W
Sbjct: 7 YVVWVGKQPGVYKSWPECQAQVNGYPEAKYKSFESKDKAEAAYKEGW 53
>emb|CAN79317.1| hypothetical protein VITISV_008344 [Vitis vinifera]
Length = 118
Score = 54.7 bits (130), Expect = 2e-06
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFMEY 398
YVVF GR+ G++ +WPEC EQV Y +YK + T+EE A+M Y
Sbjct: 32 YVVFAGRKKGIYNSWPECQEQVVGYKGNVYKLYKTFEEARRAWMFY 77
>gb|OUY04614.1| hypothetical protein CBB67_04605 [Alteromonadaceae bacterium TMED7]
Length = 105
Score = 54.3 bits (129), Expect = 2e-06
Identities = 25/49 (51%), Positives = 30/49 (61%)
Frame = +3
Query: 252 RTTYVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFMEY 398
R YVVFVGR PG++ +W E QVHR+S YK F + EE AF Y
Sbjct: 16 REAYVVFVGRNPGVYTSWEETKAQVHRFSGQNYKGFDSLEEAREAFDNY 64
>emb|SHE12540.1| Ribonuclease H [Chlamydia abortus]
Length = 208
Score = 56.2 bits (134), Expect = 2e-06
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFMEYW 401
YVV+VG +PG++ +WPEC EQV A YK FS+ E E A+ E W
Sbjct: 7 YVVWVGHKPGIYTSWPECKEQVDGRKDAKYKSFSSKAEAEKAYREGW 53
>ref|WP_080833399.1| ribonuclease H [Cohnella sp. 6021052837]
Length = 212
Score = 56.2 bits (134), Expect = 2e-06
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFMEYW 401
YVV+ GR PG++ +WPEC +Q+ ++ A YK + + E E AF E W
Sbjct: 7 YVVWAGRNPGIYASWPECRKQIEKFEDARYKSYESRAEAEKAFKEGW 53
>ref|WP_019007846.1| hypothetical protein [Cohnella laeviribosi]
Length = 212
Score = 55.8 bits (133), Expect = 3e-06
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFMEYW 401
YVV+ GR PG++ +WPEC +Q+ ++ A YK F + E E AF + W
Sbjct: 7 YVVWAGRNPGIYESWPECRKQIEKFEGAKYKSFESRAEAEAAFRDGW 53
>ref|WP_068650817.1| ribonuclease H [Paenibacillus antarcticus]
gb|OAB44927.1| ribonuclease H [Paenibacillus antarcticus]
Length = 217
Score = 55.8 bits (133), Expect = 3e-06
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFMEYW 401
YVV+VG PG++ NWPEC QV ++ A YK + + E E A+ E W
Sbjct: 7 YVVWVGNTPGIYTNWPECQSQVAQFKDAKYKSYESKSEAEQAYREGW 53
>ref|WP_068580038.1| ribonuclease H [Paenibacillus macquariensis]
gb|OAB38564.1| ribonuclease H [Paenibacillus macquariensis subsp. macquariensis]
emb|SIR31337.1| ribonuclease HI [Paenibacillus macquariensis]
Length = 217
Score = 55.8 bits (133), Expect = 3e-06
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFMEYW 401
YVV+VG PG++ NWPEC QV ++ A YK + + E E A+ E W
Sbjct: 7 YVVWVGNTPGIYTNWPECQSQVAQFKDAKYKSYESKSEAEQAYREGW 53
>ref|WP_068601073.1| ribonuclease H [Paenibacillus macquariensis]
gb|OAB27124.1| ribonuclease H [Paenibacillus macquariensis subsp. defensor]
Length = 217
Score = 55.8 bits (133), Expect = 3e-06
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAFMEYW 401
YVV+VG PG++ NWPEC QV ++ A YK + + E E A+ E W
Sbjct: 7 YVVWVGNTPGIYTNWPECQSQVAQFKDAKYKSYESKSEAEQAYREGW 53
>gb|ANY74285.1| ribonuclease H [Paenibacillus ihbetae]
Length = 218
Score = 55.8 bits (133), Expect = 3e-06
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAF----MEYWGYSS 413
YVV+VG+ PG++ +W EC +QV++Y+ A +K F + E E AF YWG SS
Sbjct: 7 YVVWVGKVPGIYTSWAECQQQVNQYTGAKFKAFESRSEAEQAFAAGYKNYWGQSS 61
>ref|WP_077568241.1| ribonuclease H [Paenibacillus ihbetae]
gb|OOC63534.1| ribonuclease H [Paenibacillus ihbetae]
Length = 219
Score = 55.8 bits (133), Expect = 3e-06
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAF----MEYWGYSS 413
YVV+VG+ PG++ +W EC +QV++Y+ A +K F + E E AF YWG SS
Sbjct: 7 YVVWVGKVPGIYASWAECQQQVNQYTGAKFKAFESRSEAEQAFAAGYKNYWGQSS 61
>ref|WP_007131775.1| ribonuclease H [Paenibacillus lactis]
gb|EHB59644.1| ribonuclease H-related protein [Paenibacillus lactis 154]
Length = 222
Score = 55.8 bits (133), Expect = 3e-06
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Frame = +3
Query: 261 YVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEEVEMAF----MEYWGYSS 413
YVV+VG+ PG++ +W EC +QV++Y+ A +K F + E E AF YWG SS
Sbjct: 7 YVVWVGKVPGIYTSWAECQQQVNQYTGAKFKAFESRSEAEQAFAAGYKNYWGQSS 61
>gb|KZV32949.1| hypothetical protein F511_01460 [Dorcoceras hygrometricum]
Length = 150
Score = 54.7 bits (130), Expect = 3e-06
Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +3
Query: 201 CFHHTG--NHNLMHNSTRMRTTYVVFVGRRPGLHPNWPECAEQVHRYSKALYKKFSTYEE 374
CF H N L+ N YVVF+GR+PG++ W E +EQV +S A YK F T +E
Sbjct: 10 CFAHVKCLNMLLVFNPRDKPKAYVVFIGRQPGVYDKWFEASEQVLGFSGACYKGFDTKKE 69
Query: 375 VEMAFMEY 398
E AF Y
Sbjct: 70 AEEAFSCY 77