BLASTX nr result

ID: Ophiopogon23_contig00000866 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00000866
         (390 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020265584.1| CBS domain-containing protein CBSX1, chlorop...    71   2e-12
gb|ONK70328.1| uncharacterized protein A4U43_C05F32600 [Asparagu...    71   5e-12

>ref|XP_020265584.1| CBS domain-containing protein CBSX1, chloroplastic [Asparagus
           officinalis]
          Length = 240

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 44/85 (51%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
 Frame = -2

Query: 254 MDTVLVISSTLSPLLAQSSSSVRSMPCLALDGRGFSSCR--LXXXXXXXXXXXXXXXPLV 81
           MDT L I+S L PLL  SSSS++S P L L GRGF S R                     
Sbjct: 1   MDTAL-IASNLCPLLTPSSSSLKSKPYLPLHGRGFFSSRHSRRQLLHTKPSTSGSGPSAF 59

Query: 80  AVARNGSVITNSQNNGVYTVGDFMT 6
           AVA+NG+V+ NS NNGVYTVGDFMT
Sbjct: 60  AVAKNGAVVANSSNNGVYTVGDFMT 84


>gb|ONK70328.1| uncharacterized protein A4U43_C05F32600 [Asparagus officinalis]
          Length = 318

 Score = 71.2 bits (173), Expect = 5e-12
 Identities = 44/85 (51%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
 Frame = -2

Query: 254 MDTVLVISSTLSPLLAQSSSSVRSMPCLALDGRGFSSCR--LXXXXXXXXXXXXXXXPLV 81
           MDT L I+S L PLL  SSSS++S P L L GRGF S R                     
Sbjct: 1   MDTAL-IASNLCPLLTPSSSSLKSKPYLPLHGRGFFSSRHSRRQLLHTKPSTSGSGPSAF 59

Query: 80  AVARNGSVITNSQNNGVYTVGDFMT 6
           AVA+NG+V+ NS NNGVYTVGDFMT
Sbjct: 60  AVAKNGAVVANSSNNGVYTVGDFMT 84


Top