BLASTX nr result

ID: Ophiopogon23_contig00000549 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00000549
         (365 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256451.1| cytochrome b6-f complex iron-sulfur subunit ...    73   3e-13
gb|KMZ63328.1| Plastoquinol--plastocyanin reductase [Zostera mar...    65   5e-10
ref|XP_020599940.1| cytochrome b6-f complex iron-sulfur subunit,...    59   9e-08
ref|XP_010927955.1| PREDICTED: cytochrome b6-f complex iron-sulf...    56   9e-07
ref|XP_009418752.1| PREDICTED: cytochrome b6-f complex iron-sulf...    55   2e-06
ref|XP_008812856.2| PREDICTED: cytochrome b6-f complex iron-sulf...    55   2e-06
ref|XP_008812857.1| PREDICTED: cytochrome b6-f complex iron-sulf...    55   2e-06

>ref|XP_020256451.1| cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic
           [Asparagus officinalis]
 gb|ONK74652.1| uncharacterized protein A4U43_C03F8740 [Asparagus officinalis]
          Length = 226

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 32/39 (82%), Positives = 38/39 (97%)
 Frame = +1

Query: 247 CSGRNGMFAPSQALLAKPAKGLGFDKGRGMKVTCMATSI 363
           C+G+NG+FAPSQAL+AKPAKGLGF KG+GMKVTCMA+SI
Sbjct: 14  CAGKNGIFAPSQALMAKPAKGLGFGKGKGMKVTCMASSI 52


>gb|KMZ63328.1| Plastoquinol--plastocyanin reductase [Zostera marina]
          Length = 226

 Score = 64.7 bits (156), Expect = 5e-10
 Identities = 28/39 (71%), Positives = 36/39 (92%)
 Frame = +1

Query: 247 CSGRNGMFAPSQALLAKPAKGLGFDKGRGMKVTCMATSI 363
           CSG+NG+F+PS+ALL+KPAKGLG  KG+G +VTCMA+SI
Sbjct: 14  CSGKNGVFSPSKALLSKPAKGLGLGKGKGGRVTCMASSI 52


>ref|XP_020599940.1| cytochrome b6-f complex iron-sulfur subunit, chloroplastic
           [Phalaenopsis equestris]
          Length = 228

 Score = 58.5 bits (140), Expect = 9e-08
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = +1

Query: 247 CSGRNGMFAPSQALLAKPAKGLGFDKGRGMKVTCMATSI 363
           CS +NG++APSQALL KP KGLG +K R MK+ C ATSI
Sbjct: 16  CSSKNGIYAPSQALLYKPTKGLGSEKDRRMKIACQATSI 54


>ref|XP_010927955.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic [Elaeis guineensis]
          Length = 228

 Score = 55.8 bits (133), Expect = 9e-07
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +1

Query: 247 CSGRNGMFAPSQALLAKPAKGLGFDKGRGMKVTCMATSI 363
           CSG+NG F+PSQALL KPAKGL   +G+  ++TC ATSI
Sbjct: 16  CSGKNGAFSPSQALLCKPAKGLCLGRGKIGRITCQATSI 54


>ref|XP_009418752.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 228

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 24/38 (63%), Positives = 32/38 (84%)
 Frame = +1

Query: 250 SGRNGMFAPSQALLAKPAKGLGFDKGRGMKVTCMATSI 363
           SG+NG+F+PS+ALL++PA+GLG  K R  K+TC ATSI
Sbjct: 17  SGKNGIFSPSRALLSRPARGLGLGKERSGKITCQATSI 54


>ref|XP_008812856.2| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic isoform X1 [Phoenix dactylifera]
          Length = 276

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = +1

Query: 247 CSGRNGMFAPSQALLAKPAKGLGFDKGRGMKVTCMATSI 363
           CSG+NG F+PSQALL KP KGL   +GR  ++TC ATSI
Sbjct: 64  CSGKNGAFSPSQALLCKPEKGLCLGRGRIGRITCQATSI 102


>ref|XP_008812857.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic isoform X2 [Phoenix dactylifera]
          Length = 277

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = +1

Query: 247 CSGRNGMFAPSQALLAKPAKGLGFDKGRGMKVTCMATSI 363
           CSG+NG F+PSQALL KP KGL   +GR  ++TC ATSI
Sbjct: 65  CSGKNGAFSPSQALLCKPEKGLCLGRGRIGRITCQATSI 103


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