BLASTX nr result

ID: Ophiopogon23_contig00000162 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon23_contig00000162
         (797 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020276227.1| ATP synthase delta chain, chloroplastic [Asp...    71   4e-11

>ref|XP_020276227.1| ATP synthase delta chain, chloroplastic [Asparagus officinalis]
 gb|ONK62983.1| uncharacterized protein A4U43_C07F10180 [Asparagus officinalis]
          Length = 210

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 36/55 (65%), Positives = 43/55 (78%)
 Frame = -1

Query: 179 MNILNHSIPSSNGQPLLPPKSSATQDATQHLSMAQSLQGAHTVSPFRPNSSKKGS 15
           M+ILNHSIP+ NGQPLLPPKSSA QDA+QHLSMA+S Q AH +    P+ S + S
Sbjct: 1   MSILNHSIPT-NGQPLLPPKSSAAQDASQHLSMARSSQAAHWMKSSEPDPSARSS 54


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