BLASTX nr result
ID: Ophiopogon23_contig00000020
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon23_contig00000020
(420 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P13951.1|RBS_SINAL RecName: Full=Ribulose bisphosphate carbox... 96 3e-23
ref|XP_009380302.1| PREDICTED: ribulose bisphosphate carboxylase... 99 3e-23
gb|ABA46900.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 99 3e-23
ref|XP_020251882.1| ribulose bisphosphate carboxylase small chai... 97 9e-23
ref|XP_020251881.1| ribulose bisphosphate carboxylase small chai... 97 9e-23
ref|XP_022770042.1| ribulose bisphosphate carboxylase small chai... 96 3e-22
emb|CDY12612.1| BnaA02g12800D [Brassica napus] 94 3e-22
gb|ABA46899.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 96 4e-22
ref|XP_020875435.1| ribulose bisphosphate carboxylase small chai... 96 4e-22
ref|XP_018460033.1| PREDICTED: ribulose bisphosphate carboxylase... 96 4e-22
ref|XP_018483304.1| PREDICTED: ribulose bisphosphate carboxylase... 96 4e-22
ref|XP_018483303.1| PREDICTED: ribulose bisphosphate carboxylase... 96 4e-22
ref|XP_018477775.1| PREDICTED: ribulose bisphosphate carboxylase... 96 4e-22
ref|XP_013619222.1| PREDICTED: ribulose bisphosphate carboxylase... 96 4e-22
ref|XP_013619178.1| PREDICTED: ribulose bisphosphate carboxylase... 96 4e-22
ref|XP_010440948.1| PREDICTED: ribulose bisphosphate carboxylase... 96 4e-22
ref|XP_010440945.1| PREDICTED: ribulose bisphosphate carboxylase... 96 4e-22
ref|XP_013674781.1| ribulose bisphosphate carboxylase small chai... 96 4e-22
ref|XP_002868776.1| ribulose bisphosphate carboxylase small chai... 96 4e-22
gb|EFH45034.1| ribulose bisphosphate carboxylase small chain 1B ... 96 4e-22
>sp|P13951.1|RBS_SINAL RecName: Full=Ribulose bisphosphate carboxylase small chain;
Short=RuBisCO small subunit
emb|CAA34458.1| unnamed protein product, partial [Sinapis alba]
Length = 82
Score = 95.9 bits (237), Expect = 3e-23
Identities = 40/54 (74%), Positives = 50/54 (92%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNYSQA 164
P+FGCTD+ QV+KEV CK+EYP+AFIRIIGFDNNRQVQC++FIAYKPP+++ A
Sbjct: 29 PLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTDA 82
>ref|XP_009380302.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Musa acuminata subsp. malaccensis]
Length = 180
Score = 98.6 bits (244), Expect = 3e-23
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNY 155
PMFGCTDA+QVVKEV+ CK+EYP AFIRIIGFDNNRQVQC++FIA+KPP Y
Sbjct: 130 PMFGCTDAVQVVKEVEECKKEYPKAFIRIIGFDNNRQVQCISFIAFKPPGY 180
>gb|ABA46900.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
Length = 180
Score = 98.6 bits (244), Expect = 3e-23
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNY 155
PMFGCTDA+QVVKEV+ CK+EYP AFIRIIGFDNNRQVQC++FIA+KPP Y
Sbjct: 130 PMFGCTDAVQVVKEVEECKKEYPKAFIRIIGFDNNRQVQCISFIAFKPPGY 180
>ref|XP_020251882.1| ribulose bisphosphate carboxylase small chain, chloroplastic-like
[Asparagus officinalis]
gb|ONK81511.1| uncharacterized protein A4U43_C01F29960 [Asparagus officinalis]
Length = 179
Score = 97.4 bits (241), Expect = 9e-23
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPP 149
PMFGCTDAIQVVKE+D CK EYP AFIRIIGFDNNRQVQCV+FIAYKPP
Sbjct: 130 PMFGCTDAIQVVKELDNCKAEYPTAFIRIIGFDNNRQVQCVSFIAYKPP 178
>ref|XP_020251881.1| ribulose bisphosphate carboxylase small chain, chloroplastic-like
[Asparagus officinalis]
gb|ONK81510.1| uncharacterized protein A4U43_C01F29950 [Asparagus officinalis]
Length = 179
Score = 97.4 bits (241), Expect = 9e-23
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPP 149
PMFGCTDAIQVVKE+D CK EYP AFIRIIGFDNNRQVQCV+FIAYKPP
Sbjct: 130 PMFGCTDAIQVVKELDNCKAEYPTAFIRIIGFDNNRQVQCVSFIAYKPP 178
>ref|XP_022770042.1| ribulose bisphosphate carboxylase small chain 3B,
chloroplastic-like [Durio zibethinus]
Length = 185
Score = 96.3 bits (238), Expect = 3e-22
Identities = 41/51 (80%), Positives = 47/51 (92%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNY 155
PM+GCTDA QV+KEVD CK+EYPDAFIRIIGFDN RQVQC++FIAYKPP +
Sbjct: 132 PMYGCTDAAQVLKEVDECKKEYPDAFIRIIGFDNRRQVQCISFIAYKPPRH 182
>emb|CDY12612.1| BnaA02g12800D [Brassica napus]
Length = 121
Score = 94.4 bits (233), Expect = 3e-22
Identities = 39/54 (72%), Positives = 49/54 (90%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNYSQA 164
P+FGCTD+ QV+KEV CK+EYP+AFIRIIGFDNNRQ QC++FIAYKPP+++ A
Sbjct: 68 PLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQAQCISFIAYKPPSFTDA 121
>gb|ABA46899.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
Length = 180
Score = 95.9 bits (237), Expect = 4e-22
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNY 155
PMFGCTDA+QV KEV+ CK+EYP AFIRIIGFDNNRQVQCV+FIAYKP Y
Sbjct: 130 PMFGCTDAVQVAKEVEECKKEYPHAFIRIIGFDNNRQVQCVSFIAYKPTGY 180
>ref|XP_020875435.1| ribulose bisphosphate carboxylase small chain 1B, chloroplastic
[Arabidopsis lyrata subsp. lyrata]
Length = 181
Score = 95.9 bits (237), Expect = 4e-22
Identities = 40/54 (74%), Positives = 50/54 (92%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNYSQA 164
P+FGCTD+ QV+KEV CK+EYP+AFIRIIGFDNNRQVQC++FIAYKPP+++ A
Sbjct: 128 PLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTDA 181
>ref|XP_018460033.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic [Raphanus sativus]
ref|XP_018465302.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic [Raphanus sativus]
Length = 181
Score = 95.9 bits (237), Expect = 4e-22
Identities = 40/54 (74%), Positives = 50/54 (92%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNYSQA 164
P+FGCTD+ QV+KEV CK+EYP+AFIRIIGFDNNRQVQC++FIAYKPP+++ A
Sbjct: 128 PLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTDA 181
>ref|XP_018483304.1| PREDICTED: ribulose bisphosphate carboxylase small chain F1,
chloroplastic [Raphanus sativus]
Length = 181
Score = 95.9 bits (237), Expect = 4e-22
Identities = 40/54 (74%), Positives = 50/54 (92%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNYSQA 164
P+FGCTD+ QV+KEV CK+EYP+AFIRIIGFDNNRQVQC++FIAYKPP+++ A
Sbjct: 128 PLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTDA 181
>ref|XP_018483303.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Raphanus sativus]
Length = 181
Score = 95.9 bits (237), Expect = 4e-22
Identities = 40/54 (74%), Positives = 50/54 (92%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNYSQA 164
P+FGCTD+ QV+KEV CK+EYP+AFIRIIGFDNNRQVQC++FIAYKPP+++ A
Sbjct: 128 PLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTDA 181
>ref|XP_018477775.1| PREDICTED: ribulose bisphosphate carboxylase small chain F1,
chloroplastic-like [Raphanus sativus]
Length = 181
Score = 95.9 bits (237), Expect = 4e-22
Identities = 40/54 (74%), Positives = 50/54 (92%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNYSQA 164
P+FGCTD+ QV+KEV CK+EYP+AFIRIIGFDNNRQVQC++FIAYKPP+++ A
Sbjct: 128 PLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTDA 181
>ref|XP_013619222.1| PREDICTED: ribulose bisphosphate carboxylase small chain 1A,
chloroplastic-like [Brassica oleracea var. oleracea]
Length = 181
Score = 95.9 bits (237), Expect = 4e-22
Identities = 40/54 (74%), Positives = 49/54 (90%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNYSQA 164
P+FGCTD QV+KEV+ CKQEYP+AFIRIIGFDNNRQ QC++FIAYKPP+++ A
Sbjct: 128 PLFGCTDPAQVLKEVEECKQEYPNAFIRIIGFDNNRQAQCISFIAYKPPSFTDA 181
>ref|XP_013619178.1| PREDICTED: ribulose bisphosphate carboxylase small chain 1A,
chloroplastic-like [Brassica oleracea var. oleracea]
Length = 181
Score = 95.9 bits (237), Expect = 4e-22
Identities = 40/54 (74%), Positives = 49/54 (90%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNYSQA 164
P+FGCTD QV+KEV+ CKQEYP+AFIRIIGFDNNRQ QC++FIAYKPP+++ A
Sbjct: 128 PLFGCTDPAQVLKEVEECKQEYPNAFIRIIGFDNNRQAQCISFIAYKPPSFTDA 181
>ref|XP_010440948.1| PREDICTED: ribulose bisphosphate carboxylase small chain F1,
chloroplastic [Camelina sativa]
Length = 181
Score = 95.9 bits (237), Expect = 4e-22
Identities = 40/54 (74%), Positives = 51/54 (94%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNYSQA 164
P+FGCTD+ QV+KEV+ CK+EYP+AFIRIIGFDNNRQVQC++FIAYKPP+++ A
Sbjct: 128 PLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTGA 181
>ref|XP_010440945.1| PREDICTED: ribulose bisphosphate carboxylase small chain F1,
chloroplastic-like [Camelina sativa]
ref|XP_010440946.1| PREDICTED: ribulose bisphosphate carboxylase small chain F1,
chloroplastic-like [Camelina sativa]
Length = 181
Score = 95.9 bits (237), Expect = 4e-22
Identities = 40/54 (74%), Positives = 51/54 (94%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNYSQA 164
P+FGCTD+ QV+KEV+ CK+EYP+AFIRIIGFDNNRQVQC++FIAYKPP+++ A
Sbjct: 128 PLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTGA 181
>ref|XP_013674781.1| ribulose bisphosphate carboxylase small chain 1B, chloroplastic
[Brassica napus]
emb|CDY42338.1| BnaC02g17150D [Brassica napus]
Length = 181
Score = 95.9 bits (237), Expect = 4e-22
Identities = 40/54 (74%), Positives = 49/54 (90%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNYSQA 164
P+FGCTD QV+KEV+ CKQEYP+AFIRIIGFDNNRQ QC++FIAYKPP+++ A
Sbjct: 128 PLFGCTDPAQVLKEVEECKQEYPNAFIRIIGFDNNRQAQCISFIAYKPPSFTDA 181
>ref|XP_002868776.1| ribulose bisphosphate carboxylase small chain 1B, chloroplastic
[Arabidopsis lyrata subsp. lyrata]
gb|EFH45035.1| ribulose bisphosphate carboxylase [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 95.9 bits (237), Expect = 4e-22
Identities = 40/54 (74%), Positives = 50/54 (92%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNYSQA 164
P+FGCTD+ QV+KEV CK+EYP+AFIRIIGFDNNRQVQC++FIAYKPP+++ A
Sbjct: 128 PLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTDA 181
>gb|EFH45034.1| ribulose bisphosphate carboxylase small chain 1B [Arabidopsis
lyrata subsp. lyrata]
Length = 181
Score = 95.9 bits (237), Expect = 4e-22
Identities = 40/54 (74%), Positives = 50/54 (92%)
Frame = +3
Query: 3 PMFGCTDAIQVVKEVDACKQEYPDAFIRIIGFDNNRQVQCVAFIAYKPPNYSQA 164
P+FGCTD+ QV+KEV CK+EYP+AFIRIIGFDNNRQVQC++FIAYKPP+++ A
Sbjct: 128 PLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTDA 181