BLASTX nr result

ID: Ophiopogon22_contig00041037 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00041037
         (431 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK60307.1| uncharacterized protein A4U43_C08F16770 [Asparagu...    54   9e-07

>gb|ONK60307.1| uncharacterized protein A4U43_C08F16770 [Asparagus officinalis]
          Length = 106

 Score = 54.3 bits (129), Expect = 9e-07
 Identities = 24/49 (48%), Positives = 38/49 (77%)
 Frame = -2

Query: 304 VSRRNQAPKRKAGREKEGDVEKQIWRKRQRFRSIAYIYMITKPIHVQRK 158
           VS+R+ A + +  R+++GD  ++  RKR+RFRS+AY+YMITKP++  RK
Sbjct: 58  VSKRDDAMRTEEDRDEDGDGGERRRRKRRRFRSLAYVYMITKPVYESRK 106


Top