BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00040361
         (984 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AVA17449.1| RNA-dependent RNA polymerase [Gigaspora margarita...   235   2e-67
gb|ALD89117.1| RNA-dependent RNA polymerase [Rhizoctonia solani ...   224   1e-63
gb|ANR02692.1| RNA-dependent RNA polymerase, partial [Rhizoctoni...   188   4e-55
gb|ALD89126.1| RNA-dependent RNA polymerase, partial [Rhizoctoni...   196   1e-52
gb|ANR02691.1| RNA-dependent RNA polymerase, partial [Rhizoctoni...   181   2e-52
gb|AIS39016.1| RNA-dependent RNA polymerase, partial [Leucostoma...   188   3e-52
ref|YP_002284334.2| RNA-dependent RNA polymerase [Botrytis ciner...   192   8e-52
gb|ALD89128.1| RNA-dependent RNA polymerase, partial [Rhizoctoni...   187   3e-51
gb|ALD89120.1| RNA-dependent RNA polymerase [Rhizoctonia solani ...   191   7e-51
gb|ANR02693.1| RNA-dependent RNA polymerase, partial [Rhizoctoni...   176   2e-50
gb|AIF33766.2| RNA-dependent RNA polymerase [Heterobasidion mito...   188   5e-50
emb|CEZ26296.1| RNA dependent RNA polymerase [Botrytis cinerea m...   187   6e-50
emb|CEZ26300.1| RNA dependent RNA polymerase [Botrytis cinerea m...   186   8e-50
emb|CAJ32468.1| RNA-dependent RNA polymerase [Ophiostoma mitovir...   186   8e-50
ref|YP_009272901.1| RNA-dependent RNA polymerase [Fusarium poae ...   183   9e-49
gb|ALD89121.1| RNA-dependent RNA polymerase [Rhizoctonia solani ...   181   8e-48
gb|AMM45292.1| putative replicase [Macrophomina phaseolina mitov...   182   1e-47
ref|YP_005352912.1| RNA dependent RNA polymerase [Clitocybe odor...   177   8e-46
emb|CAJ32466.1| RNA-dependent RNA polymerase [Ophiostoma mitovir...   170   1e-43
gb|ALD89119.1| RNA-dependent RNA polymerase, partial [Rhizoctoni...   169   5e-43

>gb|AVA17449.1| RNA-dependent RNA polymerase [Gigaspora margarita mitovirus 1]
          Length = 794

 Score =  235 bits (599), Expect = 2e-67
 Identities = 138/324 (42%), Positives = 182/324 (56%), Gaps = 1/324 (0%)
 Frame = -1

Query: 984  SSFATRASSAELWLSGQWGPALFRYLRLVLGTVGTHLVRDDMQRCVDNKAKFEAKYPKKE 805
            SS  T A +A  W++G WG AL RY +     +G+    +   R V+  A++        
Sbjct: 229  SSLGTAAPAAWNWVNGHWGEALLRYSQ----AIGSWDTTNSWYRLVEESARY-------- 276

Query: 804  KSLGGSSSQNGRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQL 625
             S   S    GR+    EPAGKVR  A+VDYWTQ +LKPLH+ +F IL++IP DGTF+Q+
Sbjct: 277  -SHFCSRMSRGRISFKDEPAGKVRAFAMVDYWTQCSLKPLHDLLFSILKEIPQDGTFDQM 335

Query: 624  RPVERLLK-KVSDKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYW 448
             P + LL  +    +  +S DL +ATDR  +  Q L +  + +   A AW TL+V R + 
Sbjct: 336  APAKELLSVRRLATETWWSLDLSAATDRFPLALQKLAMKYLVSEEYAAAWATLMVDRPF- 394

Query: 447  YFGVKSEMPESVIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEG 268
                   +P    P             RYA GQPMGAYSSWA  AL HH  VQ+AA L G
Sbjct: 395  ------RLPVGYKPRD----------CRYAVGQPMGAYSSWAAFALTHHATVQFAARLSG 438

Query: 267  YKGWFDRYAVLGDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVSRGKTCEFAKRFYFRG 88
              GWF  YA+LGDDIIIA+  VA +YR +L++ GVE  +AKS+ S  +T EFAKR  FRG
Sbjct: 439  LSGWFRDYALLGDDIIIANDRVAHKYRWLLSQLGVECSLAKSMASNQRTFEFAKRVLFRG 498

Query: 87   EDCSGLPLKFWIASQISTSVAVTL 16
             D SG P K W   Q S +  ++L
Sbjct: 499  VDVSGFPWKLWRIGQRSLAAMISL 522


>gb|ALD89117.1| RNA-dependent RNA polymerase [Rhizoctonia solani mitovirus 12]
          Length = 746

 Score =  224 bits (571), Expect = 1e-63
 Identities = 138/331 (41%), Positives = 198/331 (59%), Gaps = 4/331 (1%)
 Frame = -1

Query: 984  SSFATRASSAELWLSGQWGPALFRYLRLVLGTVGTHLVRDDMQRCVDNKAKFEAKYPKKE 805
            SS+    SS  LW S    P L+ +L+    T     +   ++  + N  K   ++  K 
Sbjct: 202  SSYMGVLSSIYLWKSSSILPYLYDFLKSTGNTSFIRFIETGVK--ISNWPK---EFTDKC 256

Query: 804  KSLGGSSSQNGRLVGL-PEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQ 628
            K+LGG        +GL PEPAGKVRV ALVD  TQ  + PLH+ +F IL KIP DGTF+Q
Sbjct: 257  KTLGG--------LGLKPEPAGKVRVFALVDCVTQWVMDPLHKRLFAILGKIPQDGTFDQ 308

Query: 627  LRPVERLLKKVSDKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYW 448
            ++P++ LL++      +YS DL +ATDRL I  QM++L+ +  A  A  W  +L+GR Y 
Sbjct: 309  IKPLKALLQR---NKSLYSLDLSAATDRLPIVLQMIVLSPLVGANFARLWSIMLIGRPY- 364

Query: 447  YFGVKSEMPESVIPWKN-HEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYL- 274
                   +P+S   + +  +K   +  L Y  GQPMGA +SWAMLA+ HH +VQ+AA+L 
Sbjct: 365  ------SLPKSASEFLSMKDKQKEWKQLYYGAGQPMGALTSWAMLAVTHHYIVQFAAFLV 418

Query: 273  EGYKGWFDRYAVLGDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVS-RGKTCEFAKRFY 97
             G   WF+ YA+LGDD++IAD  +A +Y  I++  GV++GI KSL+S  G + EFAKR++
Sbjct: 419  SGKTRWFEDYAILGDDVVIADGPIAHKYLEIMSWIGVKVGIHKSLISPSGNSLEFAKRYF 478

Query: 96   FRGEDCSGLPLKFWIASQISTSVAVTLLTWY 4
            F  +DCS +PLK   A  IS S ++ L+  Y
Sbjct: 479  FNKKDCSAVPLKEVYAGTISISASIELMRKY 509


>gb|ANR02692.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
           9]
          Length = 224

 Score =  188 bits (478), Expect = 4e-55
 Identities = 111/235 (47%), Positives = 145/235 (61%), Gaps = 2/235 (0%)
 Frame = -1

Query: 774 GRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFK-ILRKIPTDGTFNQLRPVERLLKK 598
           G+L    E AGKVRV A+VD WTQ  LKPLH+ IF  IL  IP DGT +QL PV  L+ +
Sbjct: 2   GKLSLKEESAGKVRVFAMVDPWTQWLLKPLHDTIFDHILGSIPQDGTRDQLAPVTALMSR 61

Query: 597 VSDKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYWYFGVKSEMPE 418
             +   ++S DL +ATDRL +  Q  +L  +     A  W TLLV R Y    +K     
Sbjct: 62  KPES--LFSLDLSAATDRLPLWLQKAILEGIMGQEYAQQWATLLVSRDY-ALSLKD---- 114

Query: 417 SVIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEGYKGWFDRYAV 238
                +N+++ + Y  +RYA GQPMGA SSWAMLAL HH +VQ+AAY  G+K WF  Y V
Sbjct: 115 -----RNNDRMVRYL-IRYAVGQPMGALSSWAMLALTHHFIVQFAAYRAGFKSWFTEYGV 168

Query: 237 LGDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVS-RGKTCEFAKRFYFRGEDCS 76
           LGDDI+I +  VA++Y  I+   GV IG+ KSL+S  G+  EFAK+ ++ G D S
Sbjct: 169 LGDDIVIGNTDVARQYLFIMRVLGVGIGLHKSLISISGRALEFAKKTFYMGTDVS 223


>gb|ALD89126.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
            7]
          Length = 871

 Score =  196 bits (497), Expect = 1e-52
 Identities = 121/262 (46%), Positives = 154/262 (58%), Gaps = 5/262 (1%)
 Frame = -1

Query: 774  GRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFK-ILRKIPTDGTFNQLRPVERLLKK 598
            G+L    E AGKVRV A+VD WTQ  LKP+H+ IF  IL  IP DGT +QL+PV  LL+K
Sbjct: 288  GKLSLKAESAGKVRVFAMVDCWTQWLLKPMHDSIFHHILPGIPQDGTLDQLKPVHALLRK 347

Query: 597  VSDKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYWYFGVKSEMPE 418
              D   ++S DL +ATDRL +  Q  ++A       A  W   LV R Y           
Sbjct: 348  --DPSSLFSLDLSAATDRLPLWLQEAIVAAFAGEVFARHWAEFLVNRDYVL--------- 396

Query: 417  SVIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEGYKG---WFDR 247
              +  KN +  + Y  LRYA GQPMGAYSSWAMLAL HH +VQ+ A   G      WF+ 
Sbjct: 397  -TLSDKNTDTPVRY-KLRYAVGQPMGAYSSWAMLALTHHFIVQFCAVSAGVVRSGLWFED 454

Query: 246  YAVLGDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVSRGKTC-EFAKRFYFRGEDCSGL 70
            YA+LGDDI+I ++ VA+ Y  ++A  GV IG+ KSL+S G T  EFAKR +  G+D S +
Sbjct: 455  YAILGDDIVIGNSRVAKAYIRVMATLGVGIGLHKSLISAGGTALEFAKRTFVHGKDVSPV 514

Query: 69   PLKFWIASQISTSVAVTLLTWY 4
            P+  WIAS    S AV  +  Y
Sbjct: 515  PITEWIASLNGPSCAVEFIRKY 536


>gb|ANR02691.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
           16]
          Length = 229

 Score =  181 bits (460), Expect = 2e-52
 Identities = 108/236 (45%), Positives = 139/236 (58%), Gaps = 3/236 (1%)
 Frame = -1

Query: 774 GRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQLRPVERLLKKV 595
           G+L    E AGKVRV A+VD WTQ  L P H  IF +LR IP DGTFNQ  P    LK+V
Sbjct: 2   GKLSTKEEAAGKVRVFAMVDAWTQWVLAPYHHAIFWLLRGIPMDGTFNQTAP----LKRV 57

Query: 594 SDKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYWYFGVKSEMPES 415
                ++S DL +ATDRL I  Q  LL  +F    A +W  LLVGRTY    ++ +  + 
Sbjct: 58  KAVRGLWSLDLSAATDRLPISIQKSLLGAIFGREWAASWAHLLVGRTY---ALRLDENQP 114

Query: 414 VIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEGYKGW--FDRYA 241
            +P K     +G   L+Y  GQPMGA SSWA LA+ HH +VQ +A+  G+  W  +  YA
Sbjct: 115 FMPPKG--MKLGIHKLKYTVGQPMGALSSWASLAITHHFLVQCSAWRAGFPKWKLYTNYA 172

Query: 240 VLGDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVSR-GKTCEFAKRFYFRGEDCS 76
           VLGDD++I D  V+ +Y  I+A  GV +  +KSL+S+ G   EFAKR    G D S
Sbjct: 173 VLGDDVVIGDHRVSTQYLEIMASLGVGVNTSKSLLSKTGTALEFAKRTIVNGTDVS 228


>gb|AIS39016.1| RNA-dependent RNA polymerase, partial [Leucostoma persoonii
           mitovirus 1]
          Length = 487

 Score =  188 bits (478), Expect = 3e-52
 Identities = 116/234 (49%), Positives = 146/234 (62%), Gaps = 10/234 (4%)
 Frame = -1

Query: 774 GRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQLRPVERLLKKV 595
           GRL    EPAGKVRV A+ D  TQ  LKPLHE IF ILR IP DGTFNQ RP+ERLLK V
Sbjct: 28  GRLSFKDEPAGKVRVFAIADAITQSVLKPLHEAIFAILRDIPMDGTFNQSRPLERLLKMV 87

Query: 594 S--DKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYWY-------F 442
               +D  YSYDL +ATDRL +K Q  +L+ ++++RL   W  L+VGR  W+       +
Sbjct: 88  EKYPQDRFYSYDLSAATDRLPLKLQRDVLSYLYDSRLGDLWSDLMVGRE-WHLPRNRTKY 146

Query: 441 GVKSEMPESVIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEGYK 262
              +E+ E+V               +Y  GQPMGA SSWAMLAL HH + Q A+      
Sbjct: 147 QFDTEVSETV---------------KYGVGQPMGALSSWAMLALTHHVIXQIASARVYPD 191

Query: 261 GWFDRYAVLGDDIIIADAMVAQRYRTILA-KFGVEIGIAKSLVSRGKTCEFAKR 103
             F +YA+LGDDI+IAD  VA+ Y +++   FGVEI ++KSLVS+  T EFAKR
Sbjct: 192 KVFTKYALLGDDIVIADERVAKEYHSLMTLDFGVEINLSKSLVSQ-HTFEFAKR 244


>ref|YP_002284334.2| RNA-dependent RNA polymerase [Botrytis cinerea mitovirus 1]
 gb|ABQ65153.3| RNA-dependent RNA polymerase [Botrytis cinerea mitovirus 1]
          Length = 738

 Score =  192 bits (487), Expect = 8e-52
 Identities = 112/234 (47%), Positives = 144/234 (61%), Gaps = 1/234 (0%)
 Frame = -1

Query: 774 GRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQLRPVERLLKKV 595
           G+L    E AGKVRV A+VD WTQ  L PLH++IF I+R++PTDGTF+QL+P++RL  ++
Sbjct: 284 GKLSTKEEAAGKVRVFAMVDIWTQSILNPLHKKIFSIIRELPTDGTFDQLKPLDRL-HEL 342

Query: 594 SDKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTY-WYFGVKSEMPE 418
           S +D  +S+DL +ATDRL +  Q  +L ++ +   A AW T LVGR Y W FG   +   
Sbjct: 343 STQDR-FSFDLSAATDRLPLTLQKDILTLLVSPSFAEAWGTALVGRPYKWKFGTTEDE-- 399

Query: 417 SVIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEGYKGWFDRYAV 238
                           L Y+ GQPMGA SSW MLAL HHT+VQ AA   GYK  F  YA+
Sbjct: 400 ----------------LMYSVGQPMGALSSWGMLALTHHTIVQVAASRAGYKDLFLDYAL 443

Query: 237 LGDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVSRGKTCEFAKRFYFRGEDCS 76
           LGDDI IA+  VA  Y  I+   GVEI ++KSL+S     EFAKR+     D S
Sbjct: 444 LGDDICIANKAVADNYLLIMRDLGVEINLSKSLISSTGVVEFAKRWRVGQTDVS 497


>gb|ALD89128.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
           9]
          Length = 524

 Score =  187 bits (474), Expect = 3e-51
 Identities = 109/231 (47%), Positives = 144/231 (62%), Gaps = 2/231 (0%)
 Frame = -1

Query: 774 GRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFK-ILRKIPTDGTFNQLRPVERLLKK 598
           G+L    E AGKVRV A+VD WTQ  LKPLH+ IF  IL  IP DGT +QL PV+ L+ +
Sbjct: 306 GKLSLKEESAGKVRVFAMVDPWTQWLLKPLHDTIFDYILASIPQDGTRDQLAPVKSLISR 365

Query: 597 VSDKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYWYFGVKSEMPE 418
                 ++S DL +ATDRL +  Q  +LA +     A+ W TLLV R Y    +K +   
Sbjct: 366 KPKS--LFSLDLSAATDRLPLWLQKAILAGIMGQEYALQWATLLVNRDY-VLSLKDQ--- 419

Query: 417 SVIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEGYKGWFDRYAV 238
                 N ++ + Y  +RYA GQPMGA SSWAMLAL HH +VQ+AAY  G+K WF  Y +
Sbjct: 420 ------NTDRMVRY-PIRYAVGQPMGALSSWAMLALTHHFIVQFAAYRAGFKSWFSEYGI 472

Query: 237 LGDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVS-RGKTCEFAKRFYFRG 88
           LGDDI+I +  VA++Y  I+   GV IG+ KSL+S  G+  EFAK+ ++ G
Sbjct: 473 LGDDIVIGNTDVAKQYLFIMRVLGVGIGLHKSLISISGRALEFAKKTFYMG 523


>gb|ALD89120.1| RNA-dependent RNA polymerase [Rhizoctonia solani mitovirus 15]
          Length = 961

 Score =  191 bits (485), Expect = 7e-51
 Identities = 114/261 (43%), Positives = 153/261 (58%), Gaps = 4/261 (1%)
 Frame = -1

Query: 774  GRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQLRPVERLLKKV 595
            G+L    EPAGKVRV A+ D WTQ  L+P H+ +F +LR+I  DGTF+QLRPV   +KK+
Sbjct: 421  GKLGFKEEPAGKVRVFAMADAWTQWVLEPFHQYLFDLLRQIDMDGTFDQLRPV---IKKL 477

Query: 594  SDKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYWYFGVKSEMPES 415
            +     YS DL +ATDRL I  Q +L   + +   +V W  +LVGR Y  F  K  +   
Sbjct: 478  ATVKAAYSLDLTAATDRLPIAIQTVLFKHLVSEEFSVQWMRILVGRGYMAFSSKYNV--- 534

Query: 414  VIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEG---YKGWFDRY 244
                        +  L YA GQPMGA SSWA LA+ HH +VQ AA+  G      WF  Y
Sbjct: 535  ------------FKLLEYAVGQPMGALSSWASLAITHHFIVQCAAWEAGICPVGTWFTSY 582

Query: 243  AVLGDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVS-RGKTCEFAKRFYFRGEDCSGLP 67
            AVLGDD++I D  V  +Y  I+   GV+ GIAKSL+S  G   EFAKR ++ G+D S +P
Sbjct: 583  AVLGDDLVIFDQRVKVKYLAIVDALGVQCGIAKSLLSPTGTAIEFAKRTFWMGKDISPIP 642

Query: 66   LKFWIASQISTSVAVTLLTWY 4
            L  +IA+ ++ + A++    Y
Sbjct: 643  LLEFIAANLTLADAISFARKY 663


>gb|ANR02693.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
           17]
          Length = 221

 Score =  176 bits (447), Expect = 2e-50
 Identities = 110/237 (46%), Positives = 137/237 (57%), Gaps = 4/237 (1%)
 Frame = -1

Query: 774 GRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQLRPVERLLKKV 595
           GRL    E AGKVRV A+VD WTQ  L+PLH+ +F IL  I  DGTF+Q+RPV     K 
Sbjct: 2   GRLGFKDEAAGKVRVFAMVDAWTQWVLEPLHQYMFDILSHISMDGTFDQMRPV---TAKA 58

Query: 594 SDKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYWYFGVKSEMPES 415
                 YS DL +ATDR+ ++ Q  L+A + N+  A  WKTLLVGR Y  F  K  +   
Sbjct: 59  GTATAAYSLDLTAATDRIPMELQERLVANLVNSEFAANWKTLLVGRKYVAFSPKRGVSAE 118

Query: 414 VIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEGY--KG-WFDRY 244
                          L Y  GQPMGA SSW+ LA+ HH +VQ +A+L G   KG WF  Y
Sbjct: 119 ---------------LTYGVGQPMGALSSWSSLAITHHYMVQVSAWLAGVTPKGEWFTDY 163

Query: 243 AVLGDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVS-RGKTCEFAKRFYFRGEDCS 76
           AVLGDD++I +  V   Y  I+A  GV+ G  KSL+S RG   EFAKR  ++G D S
Sbjct: 164 AVLGDDLVIFNQRVKVHYLKIVAAMGVQCGAHKSLLSPRGVAIEFAKRTLYKGVDIS 220


>gb|AIF33766.2| RNA-dependent RNA polymerase [Heterobasidion mitovirus 1]
          Length = 836

 Score =  188 bits (477), Expect = 5e-50
 Identities = 109/243 (44%), Positives = 153/243 (62%), Gaps = 5/243 (2%)
 Frame = -1

Query: 774  GRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQLRPVERLLKKV 595
            G+L    E AGKVRV A+VD  TQ AL+P+H+ +F +LR IP DGTF+QL+P+ RLL   
Sbjct: 345  GKLGFHDEAAGKVRVFAMVDPLTQWALRPIHKLLFLLLRYIPMDGTFDQLKPITRLL--A 402

Query: 594  SDKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYWYFGVKSEMPES 415
                ++ S DL +ATDRL I  Q  +++ +F   +  AW TLLVGR Y            
Sbjct: 403  QKPKVLDSLDLSAATDRLPIAIQEWIISKIFTPSIGKAWTTLLVGRDY------------ 450

Query: 414  VIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEG---YKGWFDRY 244
             +P ++ + ++    + YA GQPMGA SSWAMLA+ HH +VQ AA+  G   Y  WF  Y
Sbjct: 451  RVPKRDGQTTVLPKSVTYAVGQPMGALSSWAMLAITHHFIVQIAAWQSGVTKYGKWFTAY 510

Query: 243  AVLGDDIIIADAMVAQRYRTILAK-FGVEIGIAKSLVS-RGKTCEFAKRFYFRGEDCSGL 70
            A+LGDD+ + +  V+ RY+ I+ K  GVE+G+AKS++S +G   EFAK+ +F+G D S  
Sbjct: 511  ALLGDDLTVGNRAVSNRYQLIMIKHLGVEVGLAKSIISDKGIGLEFAKKTFFKGIDVSPR 570

Query: 69   PLK 61
            P+K
Sbjct: 571  PIK 573


>emb|CEZ26296.1| RNA dependent RNA polymerase [Botrytis cinerea mitovirus 1]
          Length = 738

 Score =  187 bits (474), Expect = 6e-50
 Identities = 111/234 (47%), Positives = 143/234 (61%), Gaps = 1/234 (0%)
 Frame = -1

Query: 774 GRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQLRPVERLLKKV 595
           G+L    E AGKVRV A+VD WTQ  L PLH++IF I+R++PTDGTF+QL+P++RL  ++
Sbjct: 284 GKLSTKEEAAGKVRVFAMVDIWTQSILNPLHKKIFSIIRELPTDGTFDQLKPLDRL-HEL 342

Query: 594 SDKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYWY-FGVKSEMPE 418
           S +D  +S+DL +ATDRL +  Q  +L ++ +   A AW T LVGR Y   FG   +   
Sbjct: 343 STQDR-FSFDLSAATDRLPLTLQKDILTLLVSPSFAEAWGTALVGRPYKLKFGTTEDE-- 399

Query: 417 SVIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEGYKGWFDRYAV 238
                           L Y+ GQPMGA SSW MLAL HHT+VQ AA   GYK  F  YA+
Sbjct: 400 ----------------LMYSVGQPMGALSSWGMLALTHHTIVQVAASRAGYKDLFLDYAL 443

Query: 237 LGDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVSRGKTCEFAKRFYFRGEDCS 76
           LGDDI IA+  VA  Y  I+   GVEI ++KSL+S     EFAKR+     D S
Sbjct: 444 LGDDICIANKAVADNYLLIMRDLGVEINLSKSLISSTGVVEFAKRWRVGQTDVS 497


>emb|CEZ26300.1| RNA dependent RNA polymerase [Botrytis cinerea mitovirus 1]
          Length = 738

 Score =  186 bits (473), Expect = 8e-50
 Identities = 111/234 (47%), Positives = 142/234 (60%), Gaps = 1/234 (0%)
 Frame = -1

Query: 774 GRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQLRPVERLLKKV 595
           G+L    E AGKVRV A+VD WTQ  L PLH++IF I+R++PTDGTF+QL+P++RL  ++
Sbjct: 284 GKLSTKEEAAGKVRVFAMVDIWTQSILNPLHKKIFSIIRELPTDGTFDQLKPLDRL-HEL 342

Query: 594 SDKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYWY-FGVKSEMPE 418
           S +D  +S+DL +ATDRL +  Q  +L ++ +   A AW T L GR Y   FG   +   
Sbjct: 343 STQDR-FSFDLSAATDRLPLALQKDILTLLVSPSFAEAWGTALTGRPYKLKFGTTEDE-- 399

Query: 417 SVIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEGYKGWFDRYAV 238
                           L YA GQPMGA SSW MLAL HHT+VQ AA   GYK  F  YA+
Sbjct: 400 ----------------LMYAVGQPMGALSSWGMLALTHHTIVQVAASRAGYKDLFLDYAL 443

Query: 237 LGDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVSRGKTCEFAKRFYFRGEDCS 76
           LGDDI IA+  VA  Y  I+   GVEI ++KSL+S     EFAKR+     D S
Sbjct: 444 LGDDICIANKAVADNYLLIMRDLGVEINLSKSLISSTGVVEFAKRWRVGQTDVS 497


>emb|CAJ32468.1| RNA-dependent RNA polymerase [Ophiostoma mitovirus 3b]
          Length = 738

 Score =  186 bits (473), Expect = 8e-50
 Identities = 111/234 (47%), Positives = 143/234 (61%), Gaps = 1/234 (0%)
 Frame = -1

Query: 774 GRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQLRPVERLLKKV 595
           G+L    E AGKVRV A+VD WTQ  L PLH++IF I+R++PTDGTF+QL+P++RL  ++
Sbjct: 284 GKLSTKEEAAGKVRVFAMVDIWTQSILNPLHKKIFSIIRELPTDGTFDQLKPLDRL-HEL 342

Query: 594 SDKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYWY-FGVKSEMPE 418
           S +D  +S+DL +ATDRL +  Q  +L ++ +   A AW T LVGR Y   FG   +   
Sbjct: 343 STQDR-FSFDLSAATDRLPLTLQKDILTLLVSPSFAEAWGTALVGRPYKLKFGTTEDE-- 399

Query: 417 SVIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEGYKGWFDRYAV 238
                           L Y+ GQPMGA SSW MLAL HHT+VQ AA   GYK  F  YA+
Sbjct: 400 ----------------LMYSVGQPMGALSSWGMLALTHHTIVQVAASRAGYKDLFLDYAL 443

Query: 237 LGDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVSRGKTCEFAKRFYFRGEDCS 76
           LGDDI IA+  VA  Y  I+   GVEI ++KSL+S     EFAKR+     D S
Sbjct: 444 LGDDICIANKAVADNYLLIMHDLGVEINLSKSLISSTGVVEFAKRWRVGQTDVS 497


>ref|YP_009272901.1| RNA-dependent RNA polymerase [Fusarium poae mitovirus 4]
 dbj|BAV56292.1| RNA-dependent RNA polymerase [Fusarium poae mitovirus 4]
          Length = 689

 Score =  183 bits (464), Expect = 9e-49
 Identities = 111/238 (46%), Positives = 138/238 (57%)
 Frame = -1

Query: 774 GRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQLRPVERLLKKV 595
           G+L    E AGKVRV A+ D WTQ  L PLH  IF  L++IP DGTF+QL+P+  LL + 
Sbjct: 260 GKLSEKKEAAGKVRVFAITDVWTQSFLSPLHHAIFGFLKRIPMDGTFDQLKPLNALLSRG 319

Query: 594 SDKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYWYFGVKSEMPES 415
                 YSYDL +ATDRL I  Q  +L+ +F    A AWK LLV R              
Sbjct: 320 LKN--FYSYDLSAATDRLPITLQEQILSRLFGESFAKAWKGLLVER-------------- 363

Query: 414 VIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEGYKGWFDRYAVL 235
             PW  + K I Y    Y+ GQPMGA SSW MLAL HH +VQ AA   G++  F  YA+L
Sbjct: 364 --PW--YHKGIPYL---YSVGQPMGALSSWGMLALTHHMIVQVAASRVGHRTMFRDYALL 416

Query: 234 GDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVSRGKTCEFAKRFYFRGEDCSGLPLK 61
           GDDI IAD+ VA+ Y +++  +GV+I ++KSL S     EFAKR      D S LP K
Sbjct: 417 GDDICIADSAVAKSYLSLMTDYGVDINLSKSLESDIGVAEFAKRLIKDETDLSPLPPK 474


>gb|ALD89121.1| RNA-dependent RNA polymerase [Rhizoctonia solani mitovirus 2]
          Length = 716

 Score =  181 bits (458), Expect = 8e-48
 Identities = 105/248 (42%), Positives = 142/248 (57%)
 Frame = -1

Query: 753 EPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQLRPVERLLKKVSDKDIIY 574
           + AGK R++ + ++W Q  L+PLH  IF+ LR IP DGTF+Q +P+  L+  V +    +
Sbjct: 222 DKAGKARIVGITNWWIQVLLEPLHNAIFEKLRLIPMDGTFDQTKPIINLVNSVPEGTTFH 281

Query: 573 SYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYWYFGVKSEMPESVIPWKNH 394
           S+DL SATDRL ++ Q  +L ++    +   WK LL G  +W              WK+ 
Sbjct: 282 SFDLSSATDRLPVEVQADILNIILPG-MGTLWKALL-GSLWWQ-------------WKSL 326

Query: 393 EKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEGYKGWFDRYAVLGDDIIIA 214
            K +     +YA GQPMGAYSSWAMLAL HH +VQ AA   GY   F  YAVLGDDI+IA
Sbjct: 327 NKRVPLKLYQYAVGQPMGAYSSWAMLALSHHVLVQLAAKNAGYSKTFTLYAVLGDDIVIA 386

Query: 213 DAMVAQRYRTILAKFGVEIGIAKSLVSRGKTCEFAKRFYFRGEDCSGLPLKFWIASQIST 34
           D  VA+ Y  I+   GV I + KSL+S  + CEFAKR+   G D S L     + +  + 
Sbjct: 387 DDNVAREYLVIMKSLGVSINLGKSLIST-RICEFAKRWIGPGVDVSPLGAGLILQTGRTK 445

Query: 33  SVAVTLLT 10
           +    LLT
Sbjct: 446 TFLAALLT 453


>gb|AMM45292.1| putative replicase [Macrophomina phaseolina mitovirus 3]
          Length = 1029

 Score =  182 bits (461), Expect = 1e-47
 Identities = 114/255 (44%), Positives = 142/255 (55%), Gaps = 3/255 (1%)
 Frame = -1

Query: 816  PKKEKSLGGSSSQNGRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGT 637
            P++ K L G     G+L    E AGKVRV A+VD WTQ AL P+HE IFKIL+ +P DGT
Sbjct: 444  PRQIKLLRGL----GKLGTKEEAAGKVRVFAMVDAWTQWALYPIHELIFKILKDVPMDGT 499

Query: 636  FNQLRPVERLLKKVSDKDIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGR 457
            F+Q  P    LK V      +S DL +ATDRL +  Q  L+  +     A AW  LL GR
Sbjct: 500  FDQTAP----LKHVRPHSGFWSLDLSAATDRLPLSIQKSLIGAILGRESAAAWANLLTGR 555

Query: 456  TYWYFGVKSEMPESVIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAY 277
            TY             +  ++H  +     L YA GQPMGA SSWA LAL HH +VQ AA+
Sbjct: 556  TY------------ALRTEDHNGNETVIKLTYAVGQPMGALSSWASLALTHHFLVQCAAW 603

Query: 276  LEGYKGW--FDRYAVLGDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVS-RGKTCEFAK 106
              G+  W  +  YAVLGDD++I D  VA  Y  I+   GV +  +KSL+S RG   EFAK
Sbjct: 604  SAGFPKWKLYTNYAVLGDDVVIGDRSVALAYLRIMKSLGVGVNTSKSLLSHRGIAFEFAK 663

Query: 105  RFYFRGEDCSGLPLK 61
            R   RG D S +  K
Sbjct: 664  RTIVRGVDVSPVTFK 678


>ref|YP_005352912.1| RNA dependent RNA polymerase [Clitocybe odora virus]
 emb|CCG47524.1| RNA dependent RNA polymerase [Clitocybe odora virus]
          Length = 1136

 Score =  177 bits (448), Expect = 8e-46
 Identities = 113/246 (45%), Positives = 148/246 (60%), Gaps = 6/246 (2%)
 Frame = -1

Query: 783 SQNGRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQLRPVERLL 604
           S  G+L    E AGKVRV A+VD W+Q  L+P H  +FKILR+I  DGTFNQL+P+ER  
Sbjct: 322 SHTGKLGLKEEAAGKVRVFAMVDPWSQMILRPFHLGLFKILRRIRMDGTFNQLKPLERAW 381

Query: 603 KKVSDKDIIYSYDLKSATDRLSIKGQMLLLAVMF---NARLAVAWKTLLVGRTYWYFGVK 433
              S    +YS DL SATDRL ++ Q+ L+  +F   NA  A AW++LLV R Y+   + 
Sbjct: 382 GFKS----LYSMDLSSATDRLPMRIQVPLIQQLFKLTNAE-AEAWRSLLVDRPYYCPPLN 436

Query: 432 SEMPESVIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLEGY--KG 259
           +                    + Y+ GQPMGA SSWAMLA+ HH +VQ AA+  G+  K 
Sbjct: 437 T-------------------SVMYSVGQPMGALSSWAMLAMTHHLIVQVAAWRSGFDKKK 477

Query: 258 WFDRYAVLGDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVS-RGKTCEFAKRFYFRGED 82
            F  YAVLGDDI+I D  VA+ Y  +L   GVE  +AKS++S RG   EFAK+ +F+G +
Sbjct: 478 LFRAYAVLGDDIVIFDKKVAKYYHRVLTGLGVECNLAKSIMSHRGIGLEFAKKTFFQGFN 537

Query: 81  CSGLPL 64
            S  PL
Sbjct: 538 VSPSPL 543


>emb|CAJ32466.1| RNA-dependent RNA polymerase [Ophiostoma mitovirus 1a]
          Length = 782

 Score =  170 bits (430), Expect = 1e-43
 Identities = 105/241 (43%), Positives = 142/241 (58%), Gaps = 3/241 (1%)
 Frame = -1

Query: 774 GRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQLRPVERLLKKV 595
           G+L    EP GKVR+ A+VD  TQ  LKPLHE IFK+L     DGTF+Q+  +E+ + ++
Sbjct: 246 GKLAAKEEP-GKVRIFAMVDAVTQWLLKPLHEAIFKLLNIFAFDGTFDQIGQLEKFMDRM 304

Query: 594 SDK-DIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYWYFGVKSEMPE 418
            DK    YS+DL +ATDRL +  Q+L+L  + +   + AW  LL GRTY  F  K+    
Sbjct: 305 KDKAPYYYSFDLSAATDRLPLSIQILILKHLVSVPFSEAWGRLLTGRTYHLFYKKTS--- 361

Query: 417 SVIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQWAAYLE-GYKGWFDRYA 241
                         + ++Y  GQPMGA SSW MLAL HH VVQ++AYL  G    F  Y 
Sbjct: 362 --------------YEVQYQVGQPMGALSSWGMLALTHHLVVQYSAYLAFGKVNLFKDYI 407

Query: 240 VLGDDIIIADAMVAQRYRTILAK-FGVEIGIAKSLVSRGKTCEFAKRFYFRGEDCSGLPL 64
           VLGDDI+I +  V+ RY  ++ +   V+I   K ++S   + EFAKRFY + +DCS L L
Sbjct: 408 VLGDDIVIGNHEVSIRYHYLMTEILKVKINPTKGIMS-PHSLEFAKRFYVQYQDCSPLSL 466

Query: 63  K 61
           K
Sbjct: 467 K 467


>gb|ALD89119.1| RNA-dependent RNA polymerase, partial [Rhizoctonia solani mitovirus
            14]
          Length = 1024

 Score =  169 bits (427), Expect = 5e-43
 Identities = 105/248 (42%), Positives = 145/248 (58%), Gaps = 5/248 (2%)
 Frame = -1

Query: 774  GRLVGLPEPAGKVRVIALVDYWTQHALKPLHEEIFKILRKIPTDGTFNQLRPVERLLKKV 595
            G+L    E AGKVRV A+V  W Q+ L+PLH+ IF+IL  +  DGTFNQ++P    LK  
Sbjct: 450  GKLGLKEEAAGKVRVFAMVPTWFQNLLRPLHDIIFEILSGVAQDGTFNQMKP----LKGH 505

Query: 594  SDK-DIIYSYDLKSATDRLSIKGQMLLLAVMFNARLAVAWKTLLVGRTYWYFGVKSEMPE 418
            S + ++ +S DL +ATDRL +  Q  L++ +    LA +W  LL          K E   
Sbjct: 506  SSRFNMSFSLDLTAATDRLPLIIQTALMSQLIGLDLATSWANLL---------TKIEYSI 556

Query: 417  SVIPWKNHEKSIGYFGLRYAQGQPMGAYSSWAMLALFHHTVVQ---WAAYLEGYKGWFDR 247
            + + +  +EK      ++Y  GQPMGA SSWAMLAL HH +VQ   W    E    WF  
Sbjct: 557  NSMKFNTYEK------VKYTVGQPMGALSSWAMLALTHHLLVQISAWRVGAEKEGTWFSD 610

Query: 246  YAVLGDDIIIADAMVAQRYRTILAKFGVEIGIAKSLVSRGKT-CEFAKRFYFRGEDCSGL 70
            YA+LGDD++I +  VA  Y  ++ K G+EIG+ KS++SR  T  EFAKR + RG D S +
Sbjct: 611  YAILGDDLVIFNYDVAHEYIKVIHKIGMEIGLHKSVLSRKFTSLEFAKRIFHRGHDVSAV 670

Query: 69   PLKFWIAS 46
            P K + A+
Sbjct: 671  PFKEFFAA 678