BLASTX nr result
ID: Ophiopogon22_contig00038712
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00038712
(399 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OMO73383.1| Integrase, catalytic core [Corchorus capsularis] 61 3e-18
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 60 9e-18
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 54 1e-17
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 54 1e-17
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 60 9e-17
gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposo... 57 9e-17
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 53 1e-16
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo... 68 7e-16
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo... 68 7e-16
gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposo... 68 7e-16
gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposo... 50 1e-15
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 69 2e-15
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 72 2e-15
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 69 2e-15
emb|CAN82357.1| hypothetical protein VITISV_005778 [Vitis vinifera] 49 2e-15
gb|KYP67044.1| Retrovirus-related Pol polyprotein from transposo... 54 2e-15
emb|CAN62181.1| hypothetical protein VITISV_044399 [Vitis vinifera] 49 3e-15
emb|CAN72400.1| hypothetical protein VITISV_041204 [Vitis vinifera] 49 3e-15
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 73 3e-15
emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera] 49 3e-15
>gb|OMO73383.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1212
Score = 61.2 bits (147), Expect(3) = 3e-18
Identities = 32/51 (62%), Positives = 37/51 (72%)
Frame = -2
Query: 398 KLPSSEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIG 246
KL +IYLLLYVDDMLIA++D A I LK LSSEFEMKDL +K +G
Sbjct: 879 KLSDGSYIYLLLYVDDMLIAAKDLAEINSLKALLSSEFEMKDLGAAKKILG 929
Score = 40.0 bits (92), Expect(3) = 3e-18
Identities = 26/63 (41%), Positives = 36/63 (57%)
Frame = -3
Query: 262 AKCILGMEIERDKEMRSCV*IKWGHWRRMLKKFYFDDKAKVANTLLAPHFKQSAKMTPRS 83
AK ILGMEI RD+++ + + ++L+ F D KAK +T LA HFK A P S
Sbjct: 924 AKKILGMEIWRDRKVGLLYVSQQKYIEKVLQSFQMD-KAKPVSTPLAAHFKLDASALPSS 982
Query: 82 VEE 74
+E
Sbjct: 983 NDE 985
Score = 37.7 bits (86), Expect(3) = 3e-18
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
MS +PY SAVGSLMYAMVCT
Sbjct: 989 MSIIPYSSAVGSLMYAMVCT 1008
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group]
gb|AAN04164.1| Putative retrotransposon protein [Oryza sativa Japonica Group]
gb|AAP53029.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 1229
Score = 60.5 bits (145), Expect(3) = 9e-18
Identities = 31/51 (60%), Positives = 36/51 (70%)
Frame = -2
Query: 398 KLPSSEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIG 246
K + HIYLLLYVDDMLIA++ I LK QLSSEF+MKDL SK +G
Sbjct: 937 KFVNGSHIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLVASKKILG 987
Score = 40.8 bits (94), Expect(3) = 9e-18
Identities = 26/68 (38%), Positives = 39/68 (57%)
Frame = -3
Query: 262 AKCILGMEIERDKEMRSCV*IKWGHWRRMLKKFYFDDKAKVANTLLAPHFKQSAKMTPRS 83
+K ILGMEI RD + + +++L++F D AK +T +APHFK SA +
Sbjct: 982 SKKILGMEITRDINSGLLFLSQQSYIKKVLQRFNIHD-AKPVSTPIAPHFKLSALQCTST 1040
Query: 82 VEEREYVS 59
E+ EY+S
Sbjct: 1041 DEDVEYMS 1048
Score = 36.2 bits (82), Expect(3) = 9e-18
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
MS VPY S VGSLMYAMVC+
Sbjct: 1047 MSRVPYSSVVGSLMYAMVCS 1066
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1373
Score = 54.3 bits (129), Expect(3) = 1e-17
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = -2
Query: 377 IYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIG 246
IYLLLYVDDMLIA++ I KLK LSSEF+MKDL +K +G
Sbjct: 1009 IYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILG 1052
Score = 45.1 bits (105), Expect(3) = 1e-17
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = -3
Query: 262 AKCILGMEIERDKEMRSCV*IKWGHWRRMLKKFYFDDKAKVANTLLAPHFKQSAKMTPRS 83
AK ILGMEI RD++ + + +++L++F + AK +T +APHFK SA P
Sbjct: 1047 AKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQN-AKAVSTPIAPHFKLSAAQCPSI 1105
Query: 82 VEEREYVS 59
E EY+S
Sbjct: 1106 DAEIEYMS 1113
Score = 37.7 bits (86), Expect(3) = 1e-17
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
MS VPY SAVGSLMYAMVC+
Sbjct: 1112 MSRVPYSSAVGSLMYAMVCS 1131
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 54.3 bits (129), Expect(3) = 1e-17
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = -2
Query: 377 IYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIG 246
IYLLLYVDDMLIA++ I KLK LSSEF+MKDL +K +G
Sbjct: 1009 IYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILG 1052
Score = 45.1 bits (105), Expect(3) = 1e-17
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = -3
Query: 262 AKCILGMEIERDKEMRSCV*IKWGHWRRMLKKFYFDDKAKVANTLLAPHFKQSAKMTPRS 83
AK ILGMEI RD++ + + +++L++F + AK +T +APHFK SA P
Sbjct: 1047 AKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQN-AKAVSTPIAPHFKLSAAQCPSI 1105
Query: 82 VEEREYVS 59
E EY+S
Sbjct: 1106 DAEIEYMS 1113
Score = 37.7 bits (86), Expect(3) = 1e-17
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
MS VPY SAVGSLMYAMVC+
Sbjct: 1112 MSRVPYSSAVGSLMYAMVCS 1131
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 60.5 bits (145), Expect(3) = 9e-17
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = -2
Query: 395 LPSSEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIG 246
LP IYLLLYVDDMLIA+++ A I KLK LSSEFEMKDL +K +G
Sbjct: 1302 LPDGSFIYLLLYVDDMLIAAKNRAEINKLKQLLSSEFEMKDLGAAKKILG 1351
Score = 37.7 bits (86), Expect(3) = 9e-17
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = -3
Query: 262 AKCILGMEIERDKEMRSCV*IKWGHWRRMLKKFYFDDKAKVANTLLAPHFKQSAKMTPRS 83
AK ILGMEI RD++ + + ++++ F+ D +K +T LA HFK P +
Sbjct: 1346 AKKILGMEIWRDRDAGLLYVSQQKYIEKLMQAFHMDH-SKPVSTPLAQHFKFDHSTLPST 1404
Query: 82 VEEREYV 62
EE EY+
Sbjct: 1405 DEEVEYM 1411
Score = 35.8 bits (81), Expect(3) = 9e-17
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
M VPY S VGSLMYAMVCT
Sbjct: 1411 MKSVPYSSVVGSLMYAMVCT 1430
>gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 530
Score = 57.4 bits (137), Expect(3) = 9e-17
Identities = 30/51 (58%), Positives = 35/51 (68%)
Frame = -2
Query: 398 KLPSSEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIG 246
KL +IYLLLYVDDMLIA++ I LK LSSEFEMKDL +K +G
Sbjct: 379 KLSDGSYIYLLLYVDDMLIAAKSKTDIDALKAMLSSEFEMKDLGTAKKILG 429
Score = 40.8 bits (94), Expect(3) = 9e-17
Identities = 25/68 (36%), Positives = 39/68 (57%)
Frame = -3
Query: 262 AKCILGMEIERDKEMRSCV*IKWGHWRRMLKKFYFDDKAKVANTLLAPHFKQSAKMTPRS 83
AK ILGMEI RD+ + + ++L+ F ++ +K +T LA HFK A P +
Sbjct: 424 AKKILGMEIWRDRNAGLLYVSQKKYIEKLLQSFQMEN-SKPVSTPLATHFKLDASTLPST 482
Query: 82 VEEREYVS 59
EE+EY++
Sbjct: 483 NEEKEYMN 490
Score = 35.8 bits (81), Expect(3) = 9e-17
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
M+ VPY SAVGSLMY MVCT
Sbjct: 489 MNTVPYSSAVGSLMYVMVCT 508
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 53.1 bits (126), Expect(3) = 1e-16
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = -2
Query: 377 IYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSK 258
IYLLLYVDDMLIA++ I KLK LSSEF+MKDL +K
Sbjct: 1009 IYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAK 1048
Score = 42.7 bits (99), Expect(3) = 1e-16
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = -3
Query: 262 AKCILGMEIERDKEMRSCV*IKWGHWRRMLKKFYFDDKAKVANTLLAPHFKQSAKMTPRS 83
AK IL MEI RD++ + + +++L++F + AK +T +APHFK SA P +
Sbjct: 1047 AKKILVMEISRDRKSGLLFLSQHNYIKKVLQRFNMQN-AKAVSTPIAPHFKLSAAQCPST 1105
Query: 82 VEEREYVS 59
E EY+S
Sbjct: 1106 DAEIEYMS 1113
Score = 37.7 bits (86), Expect(3) = 1e-16
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
MS VPY SAVGSLMYAMVC+
Sbjct: 1112 MSRVPYSSAVGSLMYAMVCS 1131
>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1032
Score = 68.2 bits (165), Expect(2) = 7e-16
Identities = 44/109 (40%), Positives = 62/109 (56%)
Frame = -2
Query: 398 KLPSSEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIGYGNRA*QGD 219
+ P IYLLLYVDDMLIASRD + I+KLK QL++EFEMK+L +K +G +
Sbjct: 697 QFPDGTFIYLLLYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQV 756
Query: 218 EKLCLNQMGALEKDVKEILF**QGKGSEYSVSSPLQAISKNDTEKCRRT 72
KL L+Q +E+ + + VS+PL A K ++ C +T
Sbjct: 757 GKLFLSQQKYIERLLDRF-----NMNNCKPVSTPLAAHFKLSSDLCPQT 800
Score = 43.1 bits (100), Expect(2) = 7e-16
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
MSHVPY SAVGSLMYAMVCT
Sbjct: 807 MSHVPYASAVGSLMYAMVCT 826
>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 68.2 bits (165), Expect(2) = 7e-16
Identities = 44/109 (40%), Positives = 62/109 (56%)
Frame = -2
Query: 398 KLPSSEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIGYGNRA*QGD 219
+ P IYLLLYVDDMLIASRD + I+KLK QL++EFEMK+L +K +G +
Sbjct: 168 QFPDGTFIYLLLYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQV 227
Query: 218 EKLCLNQMGALEKDVKEILF**QGKGSEYSVSSPLQAISKNDTEKCRRT 72
KL L+Q +E+ + + VS+PL A K ++ C +T
Sbjct: 228 GKLFLSQQKYIERLLDRF-----NMNNCKPVSTPLAAHFKLSSDLCPQT 271
Score = 43.1 bits (100), Expect(2) = 7e-16
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
MSHVPY SAVGSLMYAMVCT
Sbjct: 278 MSHVPYASAVGSLMYAMVCT 297
>gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 394
Score = 68.2 bits (165), Expect(2) = 7e-16
Identities = 44/109 (40%), Positives = 62/109 (56%)
Frame = -2
Query: 398 KLPSSEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIGYGNRA*QGD 219
+ P IYLLLYVDDMLIASRD + I+KLK QL++EFEMK+L +K +G +
Sbjct: 59 QFPDGTFIYLLLYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQV 118
Query: 218 EKLCLNQMGALEKDVKEILF**QGKGSEYSVSSPLQAISKNDTEKCRRT 72
KL L+Q +E+ + + VS+PL A K ++ C +T
Sbjct: 119 GKLFLSQQKYIERLLDRF-----NMNNCKPVSTPLAAHFKLSSDLCPQT 162
Score = 43.1 bits (100), Expect(2) = 7e-16
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
MSHVPY SAVGSLMYAMVCT
Sbjct: 169 MSHVPYASAVGSLMYAMVCT 188
>gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1269
Score = 50.1 bits (118), Expect(3) = 1e-15
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = -2
Query: 389 SSEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIG 246
+S +I LLLYVDDML+A + I LK QLS EF+MKDL +K +G
Sbjct: 941 NSSYIILLLYVDDMLVAGSNMIEIRNLKKQLSKEFDMKDLGPAKKILG 988
Score = 43.5 bits (101), Expect(3) = 1e-15
Identities = 26/70 (37%), Positives = 43/70 (61%)
Frame = -3
Query: 262 AKCILGMEIERDKEMRSCV*IKWGHWRRMLKKFYFDDKAKVANTLLAPHFKQSAKMTPRS 83
AK ILGM+I RDK+ + + + R+L++F + AK +T LA HF+ S +P++
Sbjct: 983 AKKILGMQITRDKQKGTLQLSQAEYINRVLQRFNMSN-AKPVSTPLASHFRLSTDQSPKT 1041
Query: 82 VEEREYVSCT 53
EE+E ++ T
Sbjct: 1042 EEEKELMAKT 1051
Score = 36.6 bits (83), Expect(3) = 1e-15
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
M+ PY SA+GSLMYAMVCT
Sbjct: 1048 MAKTPYASAIGSLMYAMVCT 1067
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 69.3 bits (168), Expect(2) = 2e-15
Identities = 43/95 (45%), Positives = 56/95 (58%)
Frame = -2
Query: 398 KLPSSEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIGYGNRA*QGD 219
KL HIYLLLYVDDMLIAS++ + I KLK QLS EFEMKDL +K +G +
Sbjct: 1487 KLSDGSHIYLLLYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKA 1546
Query: 218 EKLCLNQMGALEKDVKEILF**QGKGSEYSVSSPL 114
KL ++Q +EK ++ G +VS+PL
Sbjct: 1547 GKLRVSQKNYIEKVLQRF-----GMDKAKTVSTPL 1576
Score = 40.8 bits (94), Expect(2) = 2e-15
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
MSH+PY SAVGS+MYAMVCT
Sbjct: 1597 MSHIPYSSAVGSVMYAMVCT 1616
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 72.4 bits (176), Expect(2) = 2e-15
Identities = 46/106 (43%), Positives = 61/106 (57%)
Frame = -2
Query: 398 KLPSSEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIGYGNRA*QGD 219
K+ IYLLLYVDDMLIA++D + IAKLK QLSSEFEMKDL +K +G +
Sbjct: 1208 KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHS 1267
Query: 218 EKLCLNQMGALEKDVKEILF**QGKGSEYSVSSPLQAISKNDTEKC 81
KL L+Q G +EK ++ VS+PL A + ++ C
Sbjct: 1268 FKLYLSQKGYIEKVLRRF-----NMHDAKPVSTPLAAHFRLSSDLC 1308
Score = 37.7 bits (86), Expect(2) = 2e-15
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
MS VPY SAVGSLMYAMVC+
Sbjct: 1318 MSRVPYSSAVGSLMYAMVCS 1337
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 69.3 bits (168), Expect(2) = 2e-15
Identities = 43/95 (45%), Positives = 56/95 (58%)
Frame = -2
Query: 398 KLPSSEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIGYGNRA*QGD 219
KL HIYLLLYVDDMLIAS++ + I KLK QLS EFEMKDL +K +G +
Sbjct: 1508 KLSDGSHIYLLLYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKA 1567
Query: 218 EKLCLNQMGALEKDVKEILF**QGKGSEYSVSSPL 114
KL ++Q +EK ++ G +VS+PL
Sbjct: 1568 GKLRVSQKNYIEKVLQRF-----GMDKAKTVSTPL 1597
Score = 40.8 bits (94), Expect(2) = 2e-15
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
MSH+PY SAVGS+MYAMVCT
Sbjct: 1618 MSHIPYSSAVGSVMYAMVCT 1637
>emb|CAN82357.1| hypothetical protein VITISV_005778 [Vitis vinifera]
Length = 1024
Score = 48.5 bits (114), Expect(3) = 2e-15
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = -2
Query: 386 SEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIG 246
+ +I LLLYVDDMLIA D I LK QLS +F MKDL +K +G
Sbjct: 789 NSYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILG 835
Score = 41.6 bits (96), Expect(3) = 2e-15
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = -3
Query: 262 AKCILGMEIERDKEMRSCV*IKWGHWRRMLKKFYFDDKAKVANTLLAPHFKQSAKMTPRS 83
AK ILGM I RDK + + + +++L +F ++ AK +T L HFK S + +P++
Sbjct: 830 AKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNE-AKPXSTPLGSHFKLSKEQSPKT 888
Query: 82 VEEREYVS 59
EER+++S
Sbjct: 889 EEERDHMS 896
Score = 39.3 bits (90), Expect(3) = 2e-15
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
MS VPY SA+GSLMYAMVCT
Sbjct: 895 MSKVPYASAIGSLMYAMVCT 914
>gb|KYP67044.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 270
Score = 54.3 bits (129), Expect(3) = 2e-15
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = -2
Query: 377 IYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIG 246
IYLLLYVDDMLIA++ I LK LSSEFEMKDL +K +G
Sbjct: 1 IYLLLYVDDMLIAAKSKTDIDALKAMLSSEFEMKDLGAAKKILG 44
Score = 40.8 bits (94), Expect(3) = 2e-15
Identities = 25/68 (36%), Positives = 39/68 (57%)
Frame = -3
Query: 262 AKCILGMEIERDKEMRSCV*IKWGHWRRMLKKFYFDDKAKVANTLLAPHFKQSAKMTPRS 83
AK ILGMEI RD+ + + ++L+ F ++ +K +T LA HFK A P +
Sbjct: 39 AKKILGMEIWRDRNAGLLYVSQKKYIEKLLQSFQIEN-SKPVSTPLATHFKLDASTLPST 97
Query: 82 VEEREYVS 59
EE+EY++
Sbjct: 98 DEEKEYMN 105
Score = 34.3 bits (77), Expect(3) = 2e-15
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
M+ V Y SAVGSLMYAMVCT
Sbjct: 104 MNTVSYSSAVGSLMYAMVCT 123
>emb|CAN62181.1| hypothetical protein VITISV_044399 [Vitis vinifera]
Length = 1264
Score = 48.5 bits (114), Expect(3) = 3e-15
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = -2
Query: 386 SEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIG 246
+ +I LLLYVDDMLIA D I LK QLS +F MKDL +K +G
Sbjct: 937 NSYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILG 983
Score = 41.2 bits (95), Expect(3) = 3e-15
Identities = 24/68 (35%), Positives = 42/68 (61%)
Frame = -3
Query: 262 AKCILGMEIERDKEMRSCV*IKWGHWRRMLKKFYFDDKAKVANTLLAPHFKQSAKMTPRS 83
AK ILGM I R+K + + + +++L +F ++ AK +T L HFK S + +P++
Sbjct: 978 AKQILGMRIIRBKANGTLKLSQSEYVKKVLSRFNMNE-AKPVSTPLGSHFKLSKEQSPKT 1036
Query: 82 VEEREYVS 59
EER+++S
Sbjct: 1037 EEERDHMS 1044
Score = 39.3 bits (90), Expect(3) = 3e-15
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
MS VPY SA+GSLMYAMVCT
Sbjct: 1043 MSKVPYASAIGSLMYAMVCT 1062
>emb|CAN72400.1| hypothetical protein VITISV_041204 [Vitis vinifera]
Length = 1067
Score = 48.5 bits (114), Expect(3) = 3e-15
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = -2
Query: 386 SEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIG 246
+ +I LLLYVDDMLIA D I LK QLS +F MKDL +K +G
Sbjct: 832 NSYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILG 878
Score = 41.2 bits (95), Expect(3) = 3e-15
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = -3
Query: 262 AKCILGMEIERDKEMRSCV*IKWGHWRRMLKKFYFDDKAKVANTLLAPHFKQSAKMTPRS 83
AK ILGM I RDK + + + +++L +F ++ AK +T L HFK S +P++
Sbjct: 873 AKQILGMRIIRDKTNGTLKLSQSEYVKKVLSRFNMNE-AKPVSTPLGSHFKLSKXQSPKT 931
Query: 82 VEEREYVS 59
EER+++S
Sbjct: 932 EEERDHMS 939
Score = 39.3 bits (90), Expect(3) = 3e-15
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
MS VPY SA+GSLMYAMVCT
Sbjct: 938 MSKVPYASAIGSLMYAMVCT 957
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 72.8 bits (177), Expect(2) = 3e-15
Identities = 46/106 (43%), Positives = 61/106 (57%)
Frame = -2
Query: 398 KLPSSEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIGYGNRA*QGD 219
K+ IYLLLYVDDMLIA++D + IAKLK QLSSEFEMKDL +K +G +
Sbjct: 807 KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGIEITKERHS 866
Query: 218 EKLCLNQMGALEKDVKEILF**QGKGSEYSVSSPLQAISKNDTEKC 81
KL L+Q G +EK ++ VS+PL A + ++ C
Sbjct: 867 GKLYLSQKGYIEKVLRRF-----NMHDAKPVSTPLAAHFRLSSDLC 907
Score = 36.2 bits (82), Expect(2) = 3e-15
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -1
Query: 66 MSHVPYVSAVGSLMYAMVCT 7
MS VPY S VGSLMYAMVC+
Sbjct: 917 MSRVPYSSVVGSLMYAMVCS 936
>emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]
Length = 1286
Score = 48.5 bits (114), Expect(3) = 3e-15
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = -2
Query: 386 SEHIYLLLYVDDMLIASRDSAAIAKLKCQLSSEFEMKDLEGSKVHIG 246
+ +I LLLYVDDMLIA D I LK QLS +F MKDL +K +G
Sbjct: 959 NSYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILG 1005
Score = 40.4 bits (93), Expect(3) = 3e-15
Identities = 24/68 (35%), Positives = 42/68 (61%)
Frame = -3
Query: 262 AKCILGMEIERDKEMRSCV*IKWGHWRRMLKKFYFDDKAKVANTLLAPHFKQSAKMTPRS 83
AK ILGM I RDK + + + +++L +F ++ AK +T L HFK S + +P++
Sbjct: 1000 AKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNE-AKPVSTPLGSHFKLSKEQSPKT 1058
Query: 82 VEEREYVS 59
E+R+++S
Sbjct: 1059 EEKRDHMS 1066
Score = 39.7 bits (91), Expect(3) = 3e-15
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -1
Query: 78 KNVSMSHVPYVSAVGSLMYAMVCT 7
K MS VPY SA+GSLMYAMVCT
Sbjct: 1061 KRDHMSKVPYASAIGSLMYAMVCT 1084