BLASTX nr result
ID: Ophiopogon22_contig00038366
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00038366
(399 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020261207.1| retinoblastoma-related protein isoform X2 [A... 127 3e-31
ref|XP_020261206.1| retinoblastoma-related protein isoform X1 [A... 127 3e-31
ref|XP_020587738.1| retinoblastoma-related protein isoform X3 [P... 110 3e-25
ref|XP_020587736.1| retinoblastoma-related protein isoform X1 [P... 110 3e-25
ref|XP_020699496.1| retinoblastoma-related protein isoform X1 [D... 108 7e-25
ref|XP_019708488.1| PREDICTED: retinoblastoma-related protein-li... 107 2e-24
gb|ACF83073.1| unknown [Zea mays] 99 3e-24
ref|XP_010908926.1| PREDICTED: retinoblastoma-related protein [E... 106 4e-24
ref|XP_020587737.1| retinoblastoma-related protein isoform X2 [P... 106 6e-24
sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related prote... 105 1e-23
ref|XP_020699497.1| retinoblastoma-related protein isoform X2 [D... 105 1e-23
ref|XP_020088417.1| retinoblastoma-related protein [Ananas comosus] 103 4e-23
ref|XP_008810623.1| PREDICTED: retinoblastoma-related protein [P... 103 4e-23
gb|OAY77569.1| Retinoblastoma-related protein [Ananas comosus] 103 4e-23
gb|OAY64707.1| Retinoblastoma-related protein [Ananas comosus] 103 4e-23
gb|PKU79560.1| Retinoblastoma-related protein [Dendrobium catena... 103 5e-23
ref|XP_020677971.1| retinoblastoma-related protein-like [Dendrob... 103 5e-23
gb|PKA54811.1| Retinoblastoma-related protein [Apostasia shenzhe... 103 7e-23
ref|XP_020254515.1| retinoblastoma-related protein-like isoform ... 102 1e-22
ref|XP_020254514.1| retinoblastoma-related protein-like isoform ... 102 1e-22
>ref|XP_020261207.1| retinoblastoma-related protein isoform X2 [Asparagus officinalis]
Length = 857
Score = 127 bits (318), Expect = 3e-31
Identities = 66/77 (85%), Positives = 69/77 (89%), Gaps = 1/77 (1%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMSS- 223
SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLV DSVVAGSLDP + SS
Sbjct: 781 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVRDSVVAGSLDPSSDTSSP 840
Query: 222 ASAAPSKVLVKCEQSDA 172
SAAP KVLVKCEQ ++
Sbjct: 841 VSAAPLKVLVKCEQPES 857
>ref|XP_020261206.1| retinoblastoma-related protein isoform X1 [Asparagus officinalis]
gb|ONK72119.1| uncharacterized protein A4U43_C04F15940 [Asparagus officinalis]
Length = 1002
Score = 127 bits (318), Expect = 3e-31
Identities = 66/77 (85%), Positives = 69/77 (89%), Gaps = 1/77 (1%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMSS- 223
SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLV DSVVAGSLDP + SS
Sbjct: 926 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVRDSVVAGSLDPSSDTSSP 985
Query: 222 ASAAPSKVLVKCEQSDA 172
SAAP KVLVKCEQ ++
Sbjct: 986 VSAAPLKVLVKCEQPES 1002
>ref|XP_020587738.1| retinoblastoma-related protein isoform X3 [Phalaenopsis equestris]
Length = 1010
Score = 110 bits (274), Expect = 3e-25
Identities = 58/77 (75%), Positives = 64/77 (83%), Gaps = 2/77 (2%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMSSA 220
SYYACVGESTHA+QSPSKDL+AINNRLNS RKI+GRLNFD+VSDSVVAGSL P N S +
Sbjct: 933 SYYACVGESTHAYQSPSKDLSAINNRLNSSRKISGRLNFDMVSDSVVAGSLGPHNSSSDS 992
Query: 219 SAAPS--KVLVKCEQSD 175
SAA + K VKCE D
Sbjct: 993 SAAATVLKNPVKCELPD 1009
>ref|XP_020587736.1| retinoblastoma-related protein isoform X1 [Phalaenopsis equestris]
Length = 1014
Score = 110 bits (274), Expect = 3e-25
Identities = 58/77 (75%), Positives = 64/77 (83%), Gaps = 2/77 (2%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMSSA 220
SYYACVGESTHA+QSPSKDL+AINNRLNS RKI+GRLNFD+VSDSVVAGSL P N S +
Sbjct: 937 SYYACVGESTHAYQSPSKDLSAINNRLNSSRKISGRLNFDMVSDSVVAGSLGPHNSSSDS 996
Query: 219 SAAPS--KVLVKCEQSD 175
SAA + K VKCE D
Sbjct: 997 SAAATVLKNPVKCELPD 1013
>ref|XP_020699496.1| retinoblastoma-related protein isoform X1 [Dendrobium catenatum]
Length = 1036
Score = 108 bits (271), Expect = 7e-25
Identities = 60/81 (74%), Positives = 66/81 (81%), Gaps = 6/81 (7%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMS-- 226
SYYACVGESTHA+QSPSKDL+AINNRLNS RKI+GRLNFD+VSDSVVAGSL P N S
Sbjct: 955 SYYACVGESTHAYQSPSKDLSAINNRLNSSRKISGRLNFDMVSDSVVAGSLGPHNSNSDS 1014
Query: 225 -SASAAPSKVL---VKCEQSD 175
SA+AA + VL VKCE D
Sbjct: 1015 PSAAAAAAAVLKNPVKCEPPD 1035
>ref|XP_019708488.1| PREDICTED: retinoblastoma-related protein-like [Elaeis guineensis]
Length = 1003
Score = 107 bits (267), Expect = 2e-24
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 4/80 (5%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMSSA 220
SYYACVGESTHA+QSPSKDLTAINNRLNS RK++GRLNFD+VSDSVVAGSL NG S+
Sbjct: 924 SYYACVGESTHAYQSPSKDLTAINNRLNSGRKVSGRLNFDVVSDSVVAGSLGAQNGSSAP 983
Query: 219 SAAPS----KVLVKCEQSDA 172
+ AP+ ++ VK EQ D+
Sbjct: 984 APAPAFSILELPVKREQPDS 1003
>gb|ACF83073.1| unknown [Zea mays]
Length = 109
Score = 99.0 bits (245), Expect = 3e-24
Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 5/81 (6%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMSSA 220
SYYACVGEST+AFQSPSKDL AINNRLNS +K++GRLNFD+VSD VVA S LNG+ +A
Sbjct: 32 SYYACVGESTYAFQSPSKDLKAINNRLNSWKKVSGRLNFDIVSDLVVASS---LNGVQNA 88
Query: 219 SAA-----PSKVLVKCEQSDA 172
A P+K VKCE S++
Sbjct: 89 KPAATEVVPTKTPVKCEPSES 109
>ref|XP_010908926.1| PREDICTED: retinoblastoma-related protein [Elaeis guineensis]
Length = 1020
Score = 106 bits (265), Expect = 4e-24
Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 6/82 (7%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMSSA 220
SYYACVGESTHA+QSPSKDLTAINNRLNS RK++GRLNFD+VSDSVVAGSL NG S+
Sbjct: 939 SYYACVGESTHAYQSPSKDLTAINNRLNSGRKVSGRLNFDVVSDSVVAGSLGAQNGSSAP 998
Query: 219 SAAPS------KVLVKCEQSDA 172
+ AP+ ++ VK EQ D+
Sbjct: 999 APAPAPAFSILELPVKREQPDS 1020
>ref|XP_020587737.1| retinoblastoma-related protein isoform X2 [Phalaenopsis equestris]
Length = 1013
Score = 106 bits (264), Expect = 6e-24
Identities = 58/77 (75%), Positives = 64/77 (83%), Gaps = 2/77 (2%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMSSA 220
SYYACVGESTHA+QSPSKDL+AINNRLNS RKI+GRLNFD+VSDSVVAGSL P N S +
Sbjct: 937 SYYACVGESTHAYQSPSKDLSAINNRLNS-RKISGRLNFDMVSDSVVAGSLGPHNSSSDS 995
Query: 219 SAAPS--KVLVKCEQSD 175
SAA + K VKCE D
Sbjct: 996 SAAATVLKNPVKCELPD 1012
>sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related protein
gb|AAM77469.1| retinoblastoma-like protein [Cocos nucifera]
Length = 1011
Score = 105 bits (262), Expect = 1e-23
Identities = 56/78 (71%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMSSA 220
SYYACVGESTHA+QSPSKDLTAINNRLNS RK++GRLNFD+VSDSVVAGSL NG S+
Sbjct: 934 SYYACVGESTHAYQSPSKDLTAINNRLNSGRKVSGRLNFDVVSDSVVAGSLGAQNGSSAP 993
Query: 219 SAAPS--KVLVKCEQSDA 172
+ A S ++ VK EQ D+
Sbjct: 994 APACSILELPVKREQPDS 1011
>ref|XP_020699497.1| retinoblastoma-related protein isoform X2 [Dendrobium catenatum]
Length = 1035
Score = 105 bits (261), Expect = 1e-23
Identities = 60/81 (74%), Positives = 66/81 (81%), Gaps = 6/81 (7%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMS-- 226
SYYACVGESTHA+QSPSKDL+AINNRLNS RKI+GRLNFD+VSDSVVAGSL P N S
Sbjct: 955 SYYACVGESTHAYQSPSKDLSAINNRLNS-RKISGRLNFDMVSDSVVAGSLGPHNSNSDS 1013
Query: 225 -SASAAPSKVL---VKCEQSD 175
SA+AA + VL VKCE D
Sbjct: 1014 PSAAAAAAAVLKNPVKCEPPD 1034
>ref|XP_020088417.1| retinoblastoma-related protein [Ananas comosus]
Length = 1011
Score = 103 bits (258), Expect = 4e-23
Identities = 58/79 (73%), Positives = 60/79 (75%), Gaps = 3/79 (3%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLN---GM 229
SYYACVGESTHAFQSPSKDLTAINNRLN RK GRLNFD+VSDSVVAGSL N
Sbjct: 933 SYYACVGESTHAFQSPSKDLTAINNRLNCGRKAGGRLNFDVVSDSVVAGSLGNQNDSPAS 992
Query: 228 SSASAAPSKVLVKCEQSDA 172
S ASAA K VK E SD+
Sbjct: 993 SVASAATFKARVKSEPSDS 1011
>ref|XP_008810623.1| PREDICTED: retinoblastoma-related protein [Phoenix dactylifera]
Length = 1016
Score = 103 bits (258), Expect = 4e-23
Identities = 58/79 (73%), Positives = 64/79 (81%), Gaps = 3/79 (3%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMSSA 220
SYYACVGESTHA+QSPSKDLTAINNRLNS RK++GRLNFD+VSDSVVAGSL NG SSA
Sbjct: 939 SYYACVGESTHAYQSPSKDLTAINNRLNSGRKVSGRLNFDVVSDSVVAGSLGAQNG-SSA 997
Query: 219 SAAPSKVL---VKCEQSDA 172
A +L VK EQ D+
Sbjct: 998 PAPAFPILELPVKREQLDS 1016
>gb|OAY77569.1| Retinoblastoma-related protein [Ananas comosus]
Length = 1041
Score = 103 bits (258), Expect = 4e-23
Identities = 58/79 (73%), Positives = 60/79 (75%), Gaps = 3/79 (3%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLN---GM 229
SYYACVGESTHAFQSPSKDLTAINNRLN RK GRLNFD+VSDSVVAGSL N
Sbjct: 963 SYYACVGESTHAFQSPSKDLTAINNRLNCGRKAGGRLNFDVVSDSVVAGSLGNQNDSPAS 1022
Query: 228 SSASAAPSKVLVKCEQSDA 172
S ASAA K VK E SD+
Sbjct: 1023 SVASAATFKARVKSEPSDS 1041
>gb|OAY64707.1| Retinoblastoma-related protein [Ananas comosus]
Length = 1066
Score = 103 bits (258), Expect = 4e-23
Identities = 58/79 (73%), Positives = 60/79 (75%), Gaps = 3/79 (3%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLN---GM 229
SYYACVGESTHAFQSPSKDLTAINNRLN RK GRLNFD+VSDSVVAGSL N
Sbjct: 988 SYYACVGESTHAFQSPSKDLTAINNRLNCGRKAGGRLNFDVVSDSVVAGSLGNQNDSPAS 1047
Query: 228 SSASAAPSKVLVKCEQSDA 172
S ASAA K VK E SD+
Sbjct: 1048 SVASAATFKARVKSEPSDS 1066
>gb|PKU79560.1| Retinoblastoma-related protein [Dendrobium catenatum]
Length = 990
Score = 103 bits (257), Expect = 5e-23
Identities = 54/77 (70%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMSSA 220
SYYACVGESTHAFQSPSKDL IN+RLN R++ GRLNFDLVSDS+VAGSL P NG S +
Sbjct: 913 SYYACVGESTHAFQSPSKDLMVINSRLNCGRRVGGRLNFDLVSDSIVAGSLGPQNGSSGS 972
Query: 219 SAA--PSKVLVKCEQSD 175
SAA + V VK E D
Sbjct: 973 SAAGTATDVTVKSEPPD 989
>ref|XP_020677971.1| retinoblastoma-related protein-like [Dendrobium catenatum]
Length = 1017
Score = 103 bits (257), Expect = 5e-23
Identities = 54/77 (70%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMSSA 220
SYYACVGESTHAFQSPSKDL IN+RLN R++ GRLNFDLVSDS+VAGSL P NG S +
Sbjct: 940 SYYACVGESTHAFQSPSKDLMVINSRLNCGRRVGGRLNFDLVSDSIVAGSLGPQNGSSGS 999
Query: 219 SAA--PSKVLVKCEQSD 175
SAA + V VK E D
Sbjct: 1000 SAAGTATDVTVKSEPPD 1016
>gb|PKA54811.1| Retinoblastoma-related protein [Apostasia shenzhenica]
Length = 990
Score = 103 bits (256), Expect = 7e-23
Identities = 51/75 (68%), Positives = 63/75 (84%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMSSA 220
SYYACVGESTHA+QSPSKDL+AINNRLNS R+++GRLNFDLVSDS+VAGSL + + +
Sbjct: 918 SYYACVGESTHAYQSPSKDLSAINNRLNSSRRVSGRLNFDLVSDSIVAGSLGSHSARTDS 977
Query: 219 SAAPSKVLVKCEQSD 175
SA+P+ +K EQ D
Sbjct: 978 SASPT---IKLEQPD 989
>ref|XP_020254515.1| retinoblastoma-related protein-like isoform X2 [Asparagus
officinalis]
Length = 994
Score = 102 bits (254), Expect = 1e-22
Identities = 55/75 (73%), Positives = 61/75 (81%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMSSA 220
SYYACVGESTHA+QSPSKDLTAINNRLN RKIN RLNFD+VSDSVVAGSL +G SA
Sbjct: 920 SYYACVGESTHAYQSPSKDLTAINNRLNCGRKINARLNFDVVSDSVVAGSLGQQHG-GSA 978
Query: 219 SAAPSKVLVKCEQSD 175
S+A + + K EQ D
Sbjct: 979 SSAAAGLPPKSEQPD 993
>ref|XP_020254514.1| retinoblastoma-related protein-like isoform X1 [Asparagus
officinalis]
Length = 1004
Score = 102 bits (254), Expect = 1e-22
Identities = 55/75 (73%), Positives = 61/75 (81%)
Frame = -1
Query: 399 SYYACVGESTHAFQSPSKDLTAINNRLNSVRKINGRLNFDLVSDSVVAGSLDPLNGMSSA 220
SYYACVGESTHA+QSPSKDLTAINNRLN RKIN RLNFD+VSDSVVAGSL +G SA
Sbjct: 930 SYYACVGESTHAYQSPSKDLTAINNRLNCGRKINARLNFDVVSDSVVAGSLGQQHG-GSA 988
Query: 219 SAAPSKVLVKCEQSD 175
S+A + + K EQ D
Sbjct: 989 SSAAAGLPPKSEQPD 1003