BLASTX nr result

ID: Ophiopogon22_contig00038105 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00038105
         (515 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMO62613.1| hypothetical protein COLO4_32999 [Corchorus olito...    46   2e-06
emb|CDP05371.1| unnamed protein product [Coffea canephora]             43   9e-06

>gb|OMO62613.1| hypothetical protein COLO4_32999 [Corchorus olitorius]
          Length = 293

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
 Frame = +2

Query: 251 PLHDTLNPTFSFLDFKGDPP*-LAESLNGLVLTVKFLFHNKPYTNSVCNPTTQEHAVVPS 427
           P  D+  P F FLD    P   + ES  GL+L V   FH    T  +CNPTT+E+ ++P 
Sbjct: 89  PHDDSRLPPFDFLDDDDFPDVNILESCGGLLLCVSHKFHVSGRTYFICNPTTREYKILPP 148

Query: 428 P------RRRCTTASVAPPSHRPENCNVYKISS 508
           P      R R + +    P   P    +Y  SS
Sbjct: 149 PPPEDTDRIRLSPSLAFDPLKSPHYKIIYVSSS 181



 Score = 33.1 bits (74), Expect(2) = 2e-06
 Identities = 18/35 (51%), Positives = 27/35 (77%), Gaps = 3/35 (8%)
 Frame = +1

Query: 85  NDDVIREILLRLPAKSICRFRHVSK-W--LLSLTS 180
           N+D++ EILL++P+KS+ R + VSK W  L+S TS
Sbjct: 15  NEDLLTEILLKVPSKSLLRLKLVSKQWRDLISSTS 49


>emb|CDP05371.1| unnamed protein product [Coffea canephora]
          Length = 402

 Score = 42.7 bits (99), Expect(2) = 9e-06
 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
 Frame = +2

Query: 239 LEY--FPLHDTLNPTFSFLDFKGDPP*----LAESLNGLVLTVKFLFHNKPYTNSVCNPT 400
           LEY  F +HD  +P FS L F  DP      + +S NGL+L   +          V NPT
Sbjct: 90  LEYINFDVHDLTSPPFSVLKFAKDPSAGSIKILQSCNGLLLCSSYRAQRPRQNYHVFNPT 149

Query: 401 TQEHAVVPSPRRRCTTASVAPPSHRPENCNVYKI 502
           T++   +P P    T   V+  +  P   + YK+
Sbjct: 150 TKQLTTIPKPAYGRTICGVS-LAFDPTKSSAYKV 182



 Score = 34.3 bits (77), Expect(2) = 9e-06
 Identities = 16/32 (50%), Positives = 24/32 (75%)
 Frame = +1

Query: 88  DDVIREILLRLPAKSICRFRHVSKWLLSLTSD 183
           D ++ +ILLRLP +S+ RF+ VSK  LS+ S+
Sbjct: 25  DGLLEDILLRLPIRSLIRFKFVSKRWLSVISN 56


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