BLASTX nr result
ID: Ophiopogon22_contig00037816
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00037816
(671 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion)... 93 4e-18
ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion)... 92 1e-17
gb|KMZ61077.1| hypothetical protein ZOSMA_54G00060 [Zostera marina] 77 6e-15
dbj|GAV91906.1| LOW QUALITY PROTEIN: Oxidored_q1 domain-containi... 74 5e-13
gb|PNX83419.1| NADH-ubiquinone oxidoreductase chain [Trifolium p... 71 1e-12
gb|PKU59067.1| hypothetical protein MA16_Dca028078 [Dendrobium c... 53 2e-11
gb|EEF44034.1| conserved hypothetical protein [Ricinus communis] 64 2e-08
emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera] 64 3e-08
gb|AVL84851.1| NADH dehydrogenase subunit 4 (mitochondrion) [Gas... 62 1e-07
gb|ACU16717.1| unknown [Glycine max] 59 3e-07
gb|AUT20021.1| NADH dehydrogenase subunit 4 (mitochondrion) [Ory... 60 5e-07
gb|KYP78097.1| NADH-ubiquinone oxidoreductase chain 4, partial [... 58 5e-07
gb|PLY70804.1| hypothetical protein LSAT_4X39621 [Lactuca sativa] 59 9e-07
gb|PLY92897.1| hypothetical protein LSAT_3X108200 [Lactuca sativa] 58 1e-06
dbj|BAO45887.1| NADH dehydrogenase [Acacia mangium] 59 1e-06
dbj|GAY67616.1| hypothetical protein CUMW_257980 [Citrus unshiu] 59 2e-06
ref|YP_008999607.1| NADH dehydrogenase subunit 4 (mitochondrion)... 59 2e-06
sp|P93313.2|NU4M_ARATH RecName: Full=NADH-ubiquinone oxidoreduct... 59 2e-06
ref|YP_717159.1| NADH dehydrogenase subunit 4 [Brassica napus] >... 59 2e-06
ref|YP_009430432.1| NADH dehydrogenase subunit 4 (mitochondrion)... 59 2e-06
>ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
gb|AMQ23374.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
Length = 2992
Score = 93.2 bits (230), Expect = 4e-18
Identities = 76/209 (36%), Positives = 97/209 (46%), Gaps = 12/209 (5%)
Frame = +1
Query: 79 TA*TPPF-------VSRGELLPLCLRRGEGKAWAYLSR*DPIKGAVERFQPSRRAELLYV 237
TA +PPF V+ GE P L G WAYLSR V +P R + +
Sbjct: 1723 TARSPPFFVFCRHWVAAGETQPGRLSGKGGGGWAYLSRGS--SSEVPYAEPKGRTSVRHR 1780
Query: 238 IVVCHAVSSSQHRRVPMHYVPVH**GR*SWGGGLRCDTRSRITGGERCATQNGSRNRVVQ 417
+ V ++ + + W +R T GG+ + + + +++
Sbjct: 1781 CMSPRLVLAASKSTYALCSGSLIRKIELGWRSTMRYYTIV-CPGGKDAQLKTEAGSVLLK 1839
Query: 418 NFGGYRSLRLPSIRQSGTTRKRS*VRKPYDR**LSCTVRGVI-----GVLRSVGGIFGSI 582
RSLRLPSIRQSGTTRK + S + G G+ GGI GSI
Sbjct: 1840 MSEVTRSLRLPSIRQSGTTRKEVELE--------SRMIGGYYLVRFGGLAAYSGGILGSI 1891
Query: 583 EHTGNWR*HFTDVKSWTGFFSPFSMCWCS 669
EHTGNW HFT V SWTGFFSPFSMCWCS
Sbjct: 1892 EHTGNWGLHFTYVLSWTGFFSPFSMCWCS 1920
>ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
gb|AMQ23370.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
Length = 2992
Score = 92.0 bits (227), Expect = 1e-17
Identities = 78/220 (35%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Frame = +1
Query: 79 TA*TPPF-------VSRGELLPLCLRRGEGKAWAYLSR*DPIKGAVERFQPSRRAELLYV 237
TA +PPF V+ GE P L G WAYLSR V +P R + +
Sbjct: 1723 TARSPPFFVFCRHWVAAGETQPGRLSGKGGGGWAYLSRGS--SSEVPYAEPKGRTSVRHR 1780
Query: 238 IVVCHAVSSSQHRRVPMHYVPVH**GR*SWGGGL--RCDTRSRITGGERCATQNGSRNRV 411
+ V ++ + G L + + R T C G ++
Sbjct: 1781 CMSPRLVLAASKSTYAL------------CSGSLIRKIELGWRSTMSYYCIVCPGGKDAQ 1828
Query: 412 VQNFGGY---------RSLRLPSIRQSGTTRKRS*VRKPYDR**LSCTVRGVI-----GV 549
++ G RSLRLPSIRQSGTTRK + S + G G+
Sbjct: 1829 LKTEAGSVLLKMSEVTRSLRLPSIRQSGTTRKEVELE--------SRMIGGYYLVRFGGL 1880
Query: 550 LRSVGGIFGSIEHTGNWR*HFTDVKSWTGFFSPFSMCWCS 669
GGI GSIEHTGNW HFT V SWTGFFSPFSMCWCS
Sbjct: 1881 AAYSGGILGSIEHTGNWGYHFTYVYSWTGFFSPFSMCWCS 1920
>gb|KMZ61077.1| hypothetical protein ZOSMA_54G00060 [Zostera marina]
Length = 67
Score = 76.6 bits (187), Expect = 6e-15
Identities = 35/57 (61%), Positives = 43/57 (75%)
Frame = -1
Query: 671 IEHQHIEKGLKKPVHDLTSVKCYLQFPVCSIEPNIPPTDRSTPITPRTVQDSYHLSY 501
IEHQHIEKGL++PVHDLTSV+CY QFPVCSI+PNIP P P + +YH ++
Sbjct: 12 IEHQHIEKGLEEPVHDLTSVECYFQFPVCSIKPNIPLVALEPP-EPYEIFPTYHTTF 67
>dbj|GAV91906.1| LOW QUALITY PROTEIN: Oxidored_q1 domain-containing protein, partial
[Cephalotus follicularis]
Length = 460
Score = 73.9 bits (180), Expect(2) = 5e-13
Identities = 37/46 (80%), Positives = 37/46 (80%)
Frame = +2
Query: 533 GG*SAYSDQWGEYLALSNIQGIGGSILLMLSHGLVSSALFLCVGVL 670
G YSDQWGE LALSNIQGIGGS L MLSHGL SALFLCVGVL
Sbjct: 275 GNRRTYSDQWGESLALSNIQGIGGSTLSMLSHGLAPSALFLCVGVL 320
Score = 28.5 bits (62), Expect(2) = 5e-13
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 510 VITILYGSGGNRRT 551
V+TILYGS GNRRT
Sbjct: 266 VVTILYGSRGNRRT 279
>gb|PNX83419.1| NADH-ubiquinone oxidoreductase chain [Trifolium pratense]
gb|PNX85347.1| NADH-ubiquinone oxidoreductase chain [Trifolium pratense]
Length = 73
Score = 70.9 bits (172), Expect = 1e-12
Identities = 44/74 (59%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = +3
Query: 132 ETGGGESLGLPIPIGPHKGSS*EVP---AKPKGRTSVRDRSMSRRLVLAASKSTDALCSG 302
E GG LGLPIPIGPHKG+ A+PKG TSVRDRSMS R + SG
Sbjct: 2 EGGGRLGLGLPIPIGPHKGTGAVERFHIAEPKGSTSVRDRSMSSR--PRCIEKYLCTISG 59
Query: 303 SLIRKIELGWGSTM 344
S IRKIELGWGSTM
Sbjct: 60 SPIRKIELGWGSTM 73
>gb|PKU59067.1| hypothetical protein MA16_Dca028078 [Dendrobium catenatum]
Length = 67
Score = 52.8 bits (125), Expect(3) = 2e-11
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +3
Query: 411 CTKFRGLQISETTIDPTERNDQKKKLS 491
C KFRGLQIS+TTIDPTERNDQKKK S
Sbjct: 41 CKKFRGLQISDTTIDPTERNDQKKKWS 67
Score = 33.1 bits (74), Expect(3) = 2e-11
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2
Query: 293 MFRFTDKEDRVGVGVYDVI 349
MFRFT KED VGV VYDVI
Sbjct: 1 MFRFTYKEDIVGVEVYDVI 19
Score = 30.8 bits (68), Expect(3) = 2e-11
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 355 SRITGGERCATQNGSRN 405
S +T GERCATQNGSR+
Sbjct: 23 SSMTRGERCATQNGSRH 39
>gb|EEF44034.1| conserved hypothetical protein [Ricinus communis]
Length = 431
Score = 63.5 bits (153), Expect(2) = 2e-08
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 245 YVTPSRPRSIEEYRCTMFRFTDKEDRVGVGVYDVI 349
Y+T SRPR IEEY CTMFRFTDKEDRV VGVY+VI
Sbjct: 376 YITSSRPRCIEEYLCTMFRFTDKEDRVRVGVYNVI 410
Score = 23.1 bits (48), Expect(2) = 2e-08
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 354 ISYYRGRKMRNSKRKQEPCC 413
+ Y GR M RKQEP C
Sbjct: 411 LKYDPGRYMLTMGRKQEPLC 430
>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
Length = 564
Score = 63.9 bits (154), Expect = 3e-08
Identities = 29/32 (90%), Positives = 29/32 (90%)
Frame = -3
Query: 306 VNRNIVHRYSSMLRGRDGVTYYDHVQKFCPSA 211
VNRNIVHRYSSM RGRD VTYYDHVQK CPSA
Sbjct: 342 VNRNIVHRYSSMQRGRDDVTYYDHVQKCCPSA 373
Score = 60.8 bits (146), Expect = 4e-07
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = -1
Query: 578 EPNIPPTDRSTPITPRTVQDSYHLSYGFLT 489
+P IPPTDRSTPITPRTVQDSYHLSYG+L+
Sbjct: 298 QPKIPPTDRSTPITPRTVQDSYHLSYGWLS 327
>gb|AVL84851.1| NADH dehydrogenase subunit 4 (mitochondrion) [Gastrodia elata]
Length = 468
Score = 62.0 bits (149), Expect = 1e-07
Identities = 35/58 (60%), Positives = 40/58 (68%)
Frame = +2
Query: 497 SRMIGDNYLVRFGG*SAYSDQWGEYLALSNIQGIGGSILLMLSHGLVSSALFLCVGVL 670
SR I ++ + + Y +WGE LALSNIQGIGGSI M SHGLV ALFLCVGVL
Sbjct: 283 SRQIDLKKIIAYSPVARY--KWGESLALSNIQGIGGSIPPMSSHGLVPPALFLCVGVL 338
>gb|ACU16717.1| unknown [Glycine max]
Length = 173
Score = 58.9 bits (141), Expect = 3e-07
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 584 NIQGIGGSILLMLSHGLVSSALFLCVGVL 670
NIQGIGGSILLMLSHGLVSSALFLCVGVL
Sbjct: 5 NIQGIGGSILLMLSHGLVSSALFLCVGVL 33
>gb|AUT20021.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza coarctata]
Length = 492
Score = 60.5 bits (145), Expect = 5e-07
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 581 SNIQGIGGSILLMLSHGLVSSALFLCVGVL 670
SNIQGIGGSILLMLSHGLVSSALFLCVGVL
Sbjct: 324 SNIQGIGGSILLMLSHGLVSSALFLCVGVL 353
>gb|KYP78097.1| NADH-ubiquinone oxidoreductase chain 4, partial [Cajanus cajan]
Length = 149
Score = 57.8 bits (138), Expect = 5e-07
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = +2
Query: 572 LALSNIQGIGGSILLMLSHGLVSSALFLCVGVL 670
LALSNIQGIGGSI MLSHGLV SALFLCVGVL
Sbjct: 1 LALSNIQGIGGSIPPMLSHGLVPSALFLCVGVL 33
>gb|PLY70804.1| hypothetical protein LSAT_4X39621 [Lactuca sativa]
Length = 266
Score = 58.9 bits (141), Expect = 9e-07
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 584 NIQGIGGSILLMLSHGLVSSALFLCVGVL 670
NIQGIGGSILLMLSHGLVSSALFLCVGVL
Sbjct: 98 NIQGIGGSILLMLSHGLVSSALFLCVGVL 126
>gb|PLY92897.1| hypothetical protein LSAT_3X108200 [Lactuca sativa]
Length = 211
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +2
Query: 584 NIQGIGGSILLMLSHGLVSSALFLCVGVL 670
NIQGIGGSILLMLSHGLVS+ALFLCVGVL
Sbjct: 98 NIQGIGGSILLMLSHGLVSAALFLCVGVL 126
>dbj|BAO45887.1| NADH dehydrogenase [Acacia mangium]
Length = 385
Score = 58.9 bits (141), Expect = 1e-06
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 584 NIQGIGGSILLMLSHGLVSSALFLCVGVL 670
NIQGIGGSILLMLSHGLVSSALFLCVGVL
Sbjct: 216 NIQGIGGSILLMLSHGLVSSALFLCVGVL 244
>dbj|GAY67616.1| hypothetical protein CUMW_257980 [Citrus unshiu]
Length = 449
Score = 58.9 bits (141), Expect = 2e-06
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 584 NIQGIGGSILLMLSHGLVSSALFLCVGVL 670
NIQGIGGSILLMLSHGLVSSALFLCVGVL
Sbjct: 298 NIQGIGGSILLMLSHGLVSSALFLCVGVL 326
>ref|YP_008999607.1| NADH dehydrogenase subunit 4 (mitochondrion) [Vaccinium
macrocarpon]
gb|AGX28820.1| NADH dehydrogenase subunit 4 (mitochondrion) [Vaccinium
macrocarpon]
Length = 494
Score = 58.9 bits (141), Expect = 2e-06
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 584 NIQGIGGSILLMLSHGLVSSALFLCVGVL 670
NIQGIGGSILLMLSHGLVSSALFLCVGVL
Sbjct: 326 NIQGIGGSILLMLSHGLVSSALFLCVGVL 354
>sp|P93313.2|NU4M_ARATH RecName: Full=NADH-ubiquinone oxidoreductase chain 4; AltName:
Full=NADH dehydrogenase subunit 4
Length = 495
Score = 58.9 bits (141), Expect = 2e-06
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 584 NIQGIGGSILLMLSHGLVSSALFLCVGVL 670
NIQGIGGSILLMLSHGLVSSALFLCVGVL
Sbjct: 327 NIQGIGGSILLMLSHGLVSSALFLCVGVL 355
>ref|YP_717159.1| NADH dehydrogenase subunit 4 [Brassica napus]
dbj|BAC98908.1| NADH dehydrogenase subunit 4 (mitochondrion) [Brassica napus]
Length = 495
Score = 58.9 bits (141), Expect = 2e-06
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 584 NIQGIGGSILLMLSHGLVSSALFLCVGVL 670
NIQGIGGSILLMLSHGLVSSALFLCVGVL
Sbjct: 327 NIQGIGGSILLMLSHGLVSSALFLCVGVL 355
>ref|YP_009430432.1| NADH dehydrogenase subunit 4 (mitochondrion) [Platycodon
grandiflorus]
gb|ARR27564.1| NADH dehydrogenase subunit 4 (mitochondrion) [Platycodon
grandiflorus]
Length = 495
Score = 58.9 bits (141), Expect = 2e-06
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 584 NIQGIGGSILLMLSHGLVSSALFLCVGVL 670
NIQGIGGSILLMLSHGLVSSALFLCVGVL
Sbjct: 327 NIQGIGGSILLMLSHGLVSSALFLCVGVL 355