BLASTX nr result
ID: Ophiopogon22_contig00037261
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00037261
(513 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion)... 104 8e-23
ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion)... 104 1e-22
ref|XP_013442824.1| hypothetical protein MTR_0082s0080 [Medicago... 75 2e-13
dbj|GAU19200.1| hypothetical protein TSUD_198830 [Trifolium subt... 73 2e-12
gb|OWM88841.1| hypothetical protein CDL15_Pgr020795 [Punica gran... 59 3e-10
gb|PNY13897.1| hypothetical protein L195_g010565 [Trifolium prat... 63 4e-10
gb|KZM80790.1| hypothetical protein DCAR_031656 [Daucus carota s... 61 2e-09
gb|OAY65488.1| Fanconi anemia group M protein [Ananas comosus] 61 8e-08
>ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
gb|AMQ23374.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
Length = 2992
Score = 104 bits (260), Expect = 8e-23
Identities = 79/166 (47%), Positives = 92/166 (55%), Gaps = 3/166 (1%)
Frame = -1
Query: 495 GKELRVAAAPLRCGLLN*TSLPSRARSEWALCRGSVSGRGAERDRP*E*FIWIDEPFRE* 316
G R + PLR N + P RA+ A+ S G R+RP E FIWIDEPFR+
Sbjct: 1092 GTSCRGCSTPLRSFQQNFVAFP-RAKRMGAVSWVSFGAGG--RERPEESFIWIDEPFRDS 1148
Query: 315 MECLSIHIYSIFI*RAIYK-PLFIWHDMIAPSSHISSALNMRDSCWIR--SFALTKAFGP 145
+ECLSIHIYSIFI RAI K +F+WH SS + + +R C I S
Sbjct: 1149 IECLSIHIYSIFISRAIKKRSIFLWH---VRSSRLVATYQLRSICGISVGSHLSLSRIWT 1205
Query: 144 SEKDSDAFAQASAREASKVEALPEARRGSGAVVEAVASPDLLQYNS 7
K AFAQ SKV EARRGSGAVVEAVASPD +QYNS
Sbjct: 1206 LRKGLYAFAQ-----TSKV----EARRGSGAVVEAVASPDNIQYNS 1242
Score = 92.0 bits (227), Expect = 2e-18
Identities = 47/73 (64%), Positives = 53/73 (72%)
Frame = -3
Query: 511 SEIQLR*GTSCRGCSTPLRSLELNFVAFPRAKRMGAVPWVSFGAGGGERQTIRMIHLDRR 332
SEIQLR GTSCRGCSTPLRS + NFVAFPRAKRMGAV WVSFGAGG ER I +D
Sbjct: 1085 SEIQLRLGTSCRGCSTPLRSFQQNFVAFPRAKRMGAVSWVSFGAGGRERPEESFIWIDEP 1144
Query: 331 AIS*MNGMSVYPY 293
+ +S++ Y
Sbjct: 1145 FRDSIECLSIHIY 1157
>ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
gb|AMQ23370.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
Length = 2992
Score = 104 bits (259), Expect = 1e-22
Identities = 79/166 (47%), Positives = 92/166 (55%), Gaps = 3/166 (1%)
Frame = -1
Query: 495 GKELRVAAAPLRCGLLN*TSLPSRARSEWALCRGSVSGRGAERDRP*E*FIWIDEPFRE* 316
G R + PLR N + P RA+ A+ S G R+RP E FIWIDEPFR+
Sbjct: 1092 GTSCRGCSTPLRSFQQNFVAFP-RAKRMGAVSWVSFGAGG--RERPEESFIWIDEPFRDS 1148
Query: 315 MECLSIHIYSIFI*RAIYK-PLFIWHDMIAPSSHISSALNMRDSCWIR--SFALTKAFGP 145
+ECLSIHIYSIFI RAI K +F+WH SS + + +R C I S
Sbjct: 1149 IECLSIHIYSIFISRAIKKRSIFLWH---VRSSRLVATYQLRSICGISVGSHLSLSRIWT 1205
Query: 144 SEKDSDAFAQASAREASKVEALPEARRGSGAVVEAVASPDLLQYNS 7
K AFAQ SKV EARRGSGAVVEAVASPD +QYNS
Sbjct: 1206 YRKGLLAFAQ-----TSKV----EARRGSGAVVEAVASPDNIQYNS 1242
Score = 92.0 bits (227), Expect = 2e-18
Identities = 47/73 (64%), Positives = 53/73 (72%)
Frame = -3
Query: 511 SEIQLR*GTSCRGCSTPLRSLELNFVAFPRAKRMGAVPWVSFGAGGGERQTIRMIHLDRR 332
SEIQLR GTSCRGCSTPLRS + NFVAFPRAKRMGAV WVSFGAGG ER I +D
Sbjct: 1085 SEIQLRYGTSCRGCSTPLRSFQQNFVAFPRAKRMGAVSWVSFGAGGRERPEESFIWIDEP 1144
Query: 331 AIS*MNGMSVYPY 293
+ +S++ Y
Sbjct: 1145 FRDSIECLSIHIY 1157
>ref|XP_013442824.1| hypothetical protein MTR_0082s0080 [Medicago truncatula]
gb|KEH16849.1| hypothetical protein MTR_0082s0080 [Medicago truncatula]
Length = 185
Score = 74.7 bits (182), Expect = 2e-13
Identities = 36/41 (87%), Positives = 36/41 (87%)
Frame = -3
Query: 487 TSCRGCSTPLRSLELNFVAFPRAKRMGAVPWVSFGAGGGER 365
TSCRGCSTP RS E NFVAFPRAKRMGAV WVSFGAGG ER
Sbjct: 142 TSCRGCSTPPRSHEPNFVAFPRAKRMGAVLWVSFGAGGEER 182
>dbj|GAU19200.1| hypothetical protein TSUD_198830 [Trifolium subterraneum]
Length = 236
Score = 73.2 bits (178), Expect = 2e-12
Identities = 35/38 (92%), Positives = 35/38 (92%)
Frame = +1
Query: 400 AQRPFASRAGRQRSSVQETAAEWSSRDTKFLTLAGSRW 513
AQRPFASRAGR RSSV ETAAEWSSRDTKFLTL GSRW
Sbjct: 119 AQRPFASRAGRLRSSVHETAAEWSSRDTKFLTLTGSRW 156
>gb|OWM88841.1| hypothetical protein CDL15_Pgr020795 [Punica granatum]
Length = 94
Score = 59.3 bits (142), Expect(2) = 3e-10
Identities = 29/32 (90%), Positives = 29/32 (90%)
Frame = -3
Query: 460 LRSLELNFVAFPRAKRMGAVPWVSFGAGGGER 365
LRS ELNFVAFPRAKRMGAV WVSFGAGG ER
Sbjct: 60 LRSHELNFVAFPRAKRMGAVLWVSFGAGGEER 91
Score = 33.1 bits (74), Expect(2) = 3e-10
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -2
Query: 512 QRDPAKVRNFVSRLLHSA 459
QR PAKVRNFVSRL HSA
Sbjct: 42 QRYPAKVRNFVSRLPHSA 59
>gb|PNY13897.1| hypothetical protein L195_g010565 [Trifolium pratense]
Length = 77
Score = 63.2 bits (152), Expect = 4e-10
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -3
Query: 484 SCRGCSTPLRSLELNFVAFPRAKRMGAVPWVSFGAGGGER 365
SCRGCS+ RS ELNFVAFP AKRMG V WVSFGAG ER
Sbjct: 35 SCRGCSSSPRSHELNFVAFPCAKRMGIVLWVSFGAGDEER 74
>gb|KZM80790.1| hypothetical protein DCAR_031656 [Daucus carota subsp. sativus]
Length = 86
Score = 61.2 bits (147), Expect = 2e-09
Identities = 38/65 (58%), Positives = 39/65 (60%)
Frame = +2
Query: 5 RLLYCSRSGEATASTTAPLPRXXXXXXXXXXXXXXXXXXXXXXXFSLGPKAFVKAKDLIQ 184
RLLY SRSGEATASTTAPLPR FSLGPKA VKAKDLIQ
Sbjct: 21 RLLYFSRSGEATASTTAPLPR-LASGKAYTLLASLALACAKLESFSLGPKASVKAKDLIQ 79
Query: 185 QESRI 199
Q+ RI
Sbjct: 80 QKPRI 84
>gb|OAY65488.1| Fanconi anemia group M protein [Ananas comosus]
Length = 379
Score = 61.2 bits (147), Expect = 8e-08
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = +2
Query: 383 PETDPRHSAHSLRAREGNEVQFKRPQRSGAAATRSSLP 496
PETDPRHSAHSL AREGNEVQFKRPQRS + S P
Sbjct: 305 PETDPRHSAHSLCAREGNEVQFKRPQRSVSGEVAHSFP 342