BLASTX nr result
ID: Ophiopogon22_contig00036944
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00036944
(503 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD93802.1| RNA polymerase beta chain, partial (chloroplast) ... 298 2e-93
gb|ABD93844.1| RNA polymerase beta chain, partial (chloroplast) ... 295 6e-93
gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophio... 298 9e-91
gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maian... 298 9e-91
gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Lirio... 298 9e-91
gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beauc... 298 9e-91
ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [... 296 2e-90
gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscu... 296 2e-90
gb|AEZ49468.1| RNA polymerase beta'' subunit (plastid) [Agapanth... 296 4e-90
gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasyl... 296 5e-90
ref|YP_009431294.1| RNA polymerase beta' subunit (chloroplast) [... 295 6e-90
ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [... 295 6e-90
ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [... 295 6e-90
ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [N... 295 6e-90
ref|YP_009432631.1| RNA polymerase beta' subunit (chloroplast) [... 295 1e-89
ref|YP_009045556.1| RNA polymerase betasubunit (chloroplast) [Cy... 295 1e-89
ref|YP_009335494.1| RNA polymerase beta subunit (chloroplast) [S... 295 1e-89
gb|APO12552.1| RNA polymerase beta subunit (chloroplast) [Polian... 295 1e-89
ref|YP_009335069.1| RNA polymerase beta subunit (chloroplast) [H... 295 1e-89
ref|YP_009334818.1| RNA polymerase beta subunit (chloroplast) [H... 295 1e-89
>gb|ABD93802.1| RNA polymerase beta chain, partial (chloroplast) [Beaucarnea
recurvata]
Length = 830
Score = 298 bits (762), Expect = 2e-93
Identities = 150/150 (100%), Positives = 150/150 (100%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK
Sbjct: 124 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 183
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 184 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 243
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 244 IELKIFSGDIHFPGETDKISRHSGILIPPG 273
>gb|ABD93844.1| RNA polymerase beta chain, partial (chloroplast) [Agave attenuata]
Length = 761
Score = 295 bits (754), Expect = 6e-93
Identities = 148/150 (98%), Positives = 148/150 (98%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGT E DSIVKKEDLIEYRGAKEFSPK
Sbjct: 58 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTVEADSIVKKEDLIEYRGAKEFSPK 117
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 118 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 177
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 178 IELKIFSGDIHFPGETDKISRHSGILIPPG 207
>gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophiopogon japonicus]
Length = 1381
Score = 298 bits (762), Expect = 9e-91
Identities = 150/150 (100%), Positives = 150/150 (100%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK
Sbjct: 595 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 654
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 655 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 714
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 715 IELKIFSGDIHFPGETDKISRHSGILIPPG 744
>gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum stellatum]
Length = 1385
Score = 298 bits (762), Expect = 9e-91
Identities = 150/150 (100%), Positives = 150/150 (100%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK
Sbjct: 599 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 658
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 659 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 718
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 719 IELKIFSGDIHFPGETDKISRHSGILIPPG 748
>gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Liriope spicata]
Length = 1385
Score = 298 bits (762), Expect = 9e-91
Identities = 150/150 (100%), Positives = 150/150 (100%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK
Sbjct: 599 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 658
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 659 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 718
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 719 IELKIFSGDIHFPGETDKISRHSGILIPPG 748
>gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beaucarnea hookeri]
Length = 1385
Score = 298 bits (762), Expect = 9e-91
Identities = 150/150 (100%), Positives = 150/150 (100%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK
Sbjct: 599 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 658
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 659 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 718
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 719 IELKIFSGDIHFPGETDKISRHSGILIPPG 748
>ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
gb|ASW26644.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
Length = 1381
Score = 296 bits (759), Expect = 2e-90
Identities = 149/150 (99%), Positives = 150/150 (100%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAE+DSIVKKEDLIEYRGAKEFSPK
Sbjct: 595 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEMDSIVKKEDLIEYRGAKEFSPK 654
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 655 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 714
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 715 IELKIFSGDIHFPGETDKISRHSGILIPPG 744
>gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscus aculeatus]
Length = 1387
Score = 296 bits (759), Expect = 2e-90
Identities = 149/150 (99%), Positives = 150/150 (100%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK
Sbjct: 599 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 658
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 659 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 718
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
+ELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 719 MELKIFSGDIHFPGETDKISRHSGILIPPG 748
>gb|AEZ49468.1| RNA polymerase beta'' subunit (plastid) [Agapanthus praecox]
Length = 1370
Score = 296 bits (757), Expect = 4e-90
Identities = 148/150 (98%), Positives = 149/150 (99%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGT EVDSIVKKEDLIEYRGAKEFSPK
Sbjct: 597 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTVEVDSIVKKEDLIEYRGAKEFSPK 656
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIG+DTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 657 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTQLALNTNTRSRVGGLVRVERKKKS 716
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 717 IELKIFSGDIHFPGETDKISRHSGILIPPG 746
>gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasylirion wheeleri]
Length = 1385
Score = 296 bits (757), Expect = 5e-90
Identities = 149/150 (99%), Positives = 150/150 (100%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKE+LIEYRGAKEFSPK
Sbjct: 599 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKENLIEYRGAKEFSPK 658
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 659 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 718
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 719 IELKIFSGDIHFPGETDKISRHSGILIPPG 748
>ref|YP_009431294.1| RNA polymerase beta' subunit (chloroplast) [Agapanthus coddii]
gb|ASW26730.1| RNA polymerase beta' subunit (chloroplast) [Agapanthus coddii]
Length = 1366
Score = 295 bits (756), Expect = 6e-90
Identities = 148/150 (98%), Positives = 149/150 (99%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGT EVDSIVKKEDLIEYRGAKEFSPK
Sbjct: 593 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTIEVDSIVKKEDLIEYRGAKEFSPK 652
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIG+DTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 653 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTQLALNTNTRSRVGGLVRVERKKKS 712
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 713 IELKIFSGDIHFPGETDKISRHSGILIPPG 742
>ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum stenophyllum]
gb|ATB18548.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum stenophyllum]
Length = 1381
Score = 295 bits (756), Expect = 6e-90
Identities = 149/150 (99%), Positives = 149/150 (99%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKE SPK
Sbjct: 595 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKELSPK 654
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 655 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 714
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 715 IELKIFSGDIHFPGETDKISRHSGILIPPG 744
>ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
verticillatum]
ref|YP_009236350.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
sibiricum]
gb|ALM87707.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
verticillatum]
gb|AMF84063.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
sibiricum]
Length = 1382
Score = 295 bits (756), Expect = 6e-90
Identities = 149/150 (99%), Positives = 149/150 (99%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKE SPK
Sbjct: 596 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKELSPK 655
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 656 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 715
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 716 IELKIFSGDIHFPGETDKISRHSGILIPPG 745
>ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
gb|AEZ49490.1| RNA polymerase beta'' subunit, partial (plastid) [Nolina atopocarpa]
gb|APO12381.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
Length = 1385
Score = 295 bits (756), Expect = 6e-90
Identities = 149/150 (99%), Positives = 149/150 (99%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKE SPK
Sbjct: 599 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKELSPK 658
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 659 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 718
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 719 IELKIFSGDIHFPGETDKISRHSGILIPPG 748
>ref|YP_009432631.1| RNA polymerase beta' subunit (chloroplast) [Hosta minor]
gb|ATB18912.1| RNA polymerase beta' subunit (chloroplast) [Hosta minor]
Length = 1380
Score = 295 bits (754), Expect = 1e-89
Identities = 148/150 (98%), Positives = 148/150 (98%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGT E DSIVKKEDLIEYRGAKEFSPK
Sbjct: 593 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTVEADSIVKKEDLIEYRGAKEFSPK 652
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 653 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 712
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 713 IELKIFSGDIHFPGETDKISRHSGILIPPG 742
>ref|YP_009045556.1| RNA polymerase betasubunit (chloroplast) [Cypripedium macranthos]
gb|AHI16739.1| RNA polymerase betasubunit (chloroplast) (chloroplast) [Cypripedium
macranthos]
Length = 1380
Score = 295 bits (754), Expect = 1e-89
Identities = 148/150 (98%), Positives = 148/150 (98%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGT E DSIVKKEDLIEYRGAKEFSPK
Sbjct: 593 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTVEADSIVKKEDLIEYRGAKEFSPK 652
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 653 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 712
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 713 IELKIFSGDIHFPGETDKISRHSGILIPPG 742
>ref|YP_009335494.1| RNA polymerase beta subunit (chloroplast) [Schoenolirion croceum]
gb|APO12638.1| RNA polymerase beta subunit (chloroplast) [Schoenolirion croceum]
Length = 1384
Score = 295 bits (754), Expect = 1e-89
Identities = 148/150 (98%), Positives = 148/150 (98%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGT E DSIVKKEDLIEYRGAKEFSPK
Sbjct: 597 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTVEADSIVKKEDLIEYRGAKEFSPK 656
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 657 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 716
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 717 IELKIFSGDIHFPGETDKISRHSGILIPPG 746
>gb|APO12552.1| RNA polymerase beta subunit (chloroplast) [Polianthes sp. Pires 2011]
Length = 1384
Score = 295 bits (754), Expect = 1e-89
Identities = 148/150 (98%), Positives = 148/150 (98%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGT E DSIVKKEDLIEYRGAKEFSPK
Sbjct: 597 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTVEADSIVKKEDLIEYRGAKEFSPK 656
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 657 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 716
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 717 IELKIFSGDIHFPGETDKISRHSGILIPPG 746
>ref|YP_009335069.1| RNA polymerase beta subunit (chloroplast) [Hesperoyucca whipplei]
gb|APO12127.1| RNA polymerase beta subunit (chloroplast) [Hesperoyucca whipplei]
Length = 1384
Score = 295 bits (754), Expect = 1e-89
Identities = 148/150 (98%), Positives = 148/150 (98%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGT E DSIVKKEDLIEYRGAKEFSPK
Sbjct: 597 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTVEADSIVKKEDLIEYRGAKEFSPK 656
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 657 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 716
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 717 IELKIFSGDIHFPGETDKISRHSGILIPPG 746
>ref|YP_009334818.1| RNA polymerase beta subunit (chloroplast) [Hesperaloe campanulata]
gb|APO11876.1| RNA polymerase beta subunit (chloroplast) [Hesperaloe campanulata]
Length = 1384
Score = 295 bits (754), Expect = 1e-89
Identities = 148/150 (98%), Positives = 148/150 (98%)
Frame = +1
Query: 1 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPK 180
SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGT E DSIVKKEDLIEYRGAKEFSPK
Sbjct: 597 SIEIPINGILRRNSILAYFDDPRYRRKSSGITKYGTVEADSIVKKEDLIEYRGAKEFSPK 656
Query: 181 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 360
YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS
Sbjct: 657 YQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKS 716
Query: 361 IELKIFSGDIHFPGETDKISRHSGILIPPG 450
IELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 717 IELKIFSGDIHFPGETDKISRHSGILIPPG 746