BLASTX nr result
ID: Ophiopogon22_contig00036888
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00036888
(538 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020258463.1| pentatricopeptide repeat-containing protein ... 84 2e-15
gb|PKU77242.1| Pentatricopeptide repeat-containing protein [Dend... 73 8e-12
ref|XP_008807521.1| PREDICTED: pentatricopeptide repeat-containi... 67 1e-09
ref|XP_010906516.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_020574583.1| pentatricopeptide repeat-containing protein ... 65 7e-09
ref|XP_008803169.1| PREDICTED: pentatricopeptide repeat-containi... 60 3e-07
>ref|XP_020258463.1| pentatricopeptide repeat-containing protein At1g09900-like
[Asparagus officinalis]
ref|XP_020258465.1| pentatricopeptide repeat-containing protein At1g09900-like
[Asparagus officinalis]
ref|XP_020258466.1| pentatricopeptide repeat-containing protein At1g09900-like
[Asparagus officinalis]
ref|XP_020258467.1| pentatricopeptide repeat-containing protein At1g09900-like
[Asparagus officinalis]
gb|ONK76484.1| uncharacterized protein A4U43_C03F28560 [Asparagus officinalis]
Length = 550
Score = 83.6 bits (205), Expect = 2e-15
Identities = 49/90 (54%), Positives = 65/90 (72%), Gaps = 2/90 (2%)
Frame = +1
Query: 274 MRLAPSPRKTLALLIVISLSR-RNPRSYSSGEHQQLVTKFSKIVSQFSK-RPNLSPQIGA 447
MRL PS RKT A I ISL R +NPR +SS Q L+ KFS V++FS+ P +SPQI +
Sbjct: 1 MRLPPSTRKTAAFFIKISLHRPQNPRPFSSD--QTLIAKFSYAVNRFSQIPPPVSPQISS 58
Query: 448 RPRNPHQFEYNAMMKEFGRSGNVEEVLRLF 537
RP+NP FE+NA+M++F SGN+ +VLR+F
Sbjct: 59 RPQNP--FEFNALMQDFALSGNLSQVLRVF 86
>gb|PKU77242.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 492
Score = 73.2 bits (178), Expect = 8e-12
Identities = 46/91 (50%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Frame = +1
Query: 274 MRLAPS--PRKTLALLIVISLSRRNPRSYSSGEHQQLVTKFSKIVSQFSKR-PNLSPQIG 444
+RL PS PRK+ S R P S+G+ LV +FS+I+ QFSKR P SP I
Sbjct: 10 VRLCPSRVPRKSAGK------SLRGPELGSAGK--LLVLRFSEILKQFSKRKPVCSPVID 61
Query: 445 ARPRNPHQFEYNAMMKEFGRSGNVEEVLRLF 537
ARPR+PH FEY+ +MKEF ++G V++VLRLF
Sbjct: 62 ARPRHPHWFEYSKLMKEFKQAGQVDQVLRLF 92
>ref|XP_008807521.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Phoenix dactylifera]
ref|XP_008807548.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Phoenix dactylifera]
ref|XP_017701445.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Phoenix dactylifera]
Length = 583
Score = 67.0 bits (162), Expect = 1e-09
Identities = 44/105 (41%), Positives = 58/105 (55%), Gaps = 24/105 (22%)
Frame = +1
Query: 295 RKTLALLIVIS--------LSRRNPRSYSSGEHQQ--------LVTKFSKIVSQFSKRP- 423
RKTLA I L RR S++SG Q+ LV KFS++ FSK+
Sbjct: 15 RKTLAFSIDSGRRISSSSCLYRRLMASHASGWRQRETSASRNDLVIKFSEVAKHFSKKDP 74
Query: 424 -------NLSPQIGARPRNPHQFEYNAMMKEFGRSGNVEEVLRLF 537
+ +P++GARPR PH F+YN++MK F +G VEEVLRLF
Sbjct: 75 SSSSSSSSCAPEVGARPRWPHPFDYNSLMKAFSDAGEVEEVLRLF 119
>ref|XP_010906516.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16640,
mitochondrial-like [Elaeis guineensis]
ref|XP_010906517.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16640,
mitochondrial-like [Elaeis guineensis]
ref|XP_010906518.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16640,
mitochondrial-like [Elaeis guineensis]
ref|XP_010906519.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16640,
mitochondrial-like [Elaeis guineensis]
ref|XP_010906520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16640,
mitochondrial-like [Elaeis guineensis]
ref|XP_010906521.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16640,
mitochondrial-like [Elaeis guineensis]
ref|XP_019702215.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16640,
mitochondrial-like [Elaeis guineensis]
Length = 581
Score = 66.6 bits (161), Expect = 2e-09
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 6/67 (8%)
Frame = +1
Query: 355 SSGEHQQLVTKFSKIVSQFSKRPNLS------PQIGARPRNPHQFEYNAMMKEFGRSGNV 516
+S L+ KFS++V FS++ S P++GARPR PH F+YN++MK F +G V
Sbjct: 51 TSASRNDLIIKFSEVVKHFSEKDPSSSSSSSVPEVGARPRWPHPFDYNSLMKAFSHAGEV 110
Query: 517 EEVLRLF 537
EEVLRLF
Sbjct: 111 EEVLRLF 117
>ref|XP_020574583.1| pentatricopeptide repeat-containing protein At5g65560-like
[Phalaenopsis equestris]
Length = 567
Score = 64.7 bits (156), Expect = 7e-09
Identities = 31/55 (56%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Frame = +1
Query: 373 QLVTKFSKIVSQFSKRPNL-SPQIGARPRNPHQFEYNAMMKEFGRSGNVEEVLRL 534
+L+ +FSKIV QFSK+ ++ +P I RPR+PH+FEY+ +MKEF R+G V++VLRL
Sbjct: 49 KLLLRFSKIVKQFSKQHSVPAPVIDDRPRHPHRFEYSKLMKEFKRAGQVDQVLRL 103
>ref|XP_008803169.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g12620-like [Phoenix dactylifera]
ref|XP_008803177.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g12620-like [Phoenix dactylifera]
Length = 585
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +1
Query: 343 PRSYSSGEHQQLVTKFSKIVSQFSK-RPNLSPQIGARPRNPHQFEYNAMMKEFGRSGNVE 519
P S+ +L+ +FS++ +F K +PN +P+ GA+P F YN +MK F R+GN+
Sbjct: 57 PESHKDTSGDELLHRFSEVAGKFPKTKPNPAPESGAKPLESDPFHYNTLMKVFSRAGNIS 116
Query: 520 EVLRLF 537
EVLRL+
Sbjct: 117 EVLRLY 122