BLASTX nr result
ID: Ophiopogon22_contig00036688
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00036688
(665 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion)... 167 3e-50
ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion)... 167 3e-50
gb|OMO71560.1| hypothetical protein COLO4_28184 [Corchorus olito... 155 8e-45
gb|OMP02494.1| hypothetical protein CCACVL1_02786 [Corchorus cap... 119 2e-30
gb|PKI40735.1| hypothetical protein CRG98_038873 [Punica granatum] 117 1e-28
ref|XP_013442821.1| hypothetical protein MTR_0082s0050 [Medicago... 97 3e-20
gb|OMP03655.1| hypothetical protein CCACVL1_02323, partial [Corc... 84 1e-17
gb|PHU03937.1| hypothetical protein BC332_29188 [Capsicum chinense] 62 1e-07
>ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
gb|AMQ23374.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
Length = 2992
Score = 167 bits (423), Expect(3) = 3e-50
Identities = 95/158 (60%), Positives = 100/158 (63%), Gaps = 1/158 (0%)
Frame = -2
Query: 475 RGGTTMDDTSRPRFFCIVRGPAAAEQXXXXXXXXXXXXXXXXXRAGRA*IQSGPDSSLFQ 296
R G MDD RPRFFCIV GPAAAE AGRA ++SGPDSSLFQ
Sbjct: 2524 RRGALMDDIPRPRFFCIVWGPAAAELRGIAAPSPGAILGPCSRWAGRASMKSGPDSSLFQ 2583
Query: 295 LLPRTQTGRSQLSWTGQVRRDLRGTGEGVSIDLF*DSNXXXXXXXXXXXXXXXXXXXXSK 116
LLPRTQTGRSQLSWT QVR DLRGTGEGVSIDLF DSN +
Sbjct: 2584 LLPRTQTGRSQLSWTSQVRSDLRGTGEGVSIDLFSDSNSRHARRFFYSLSLGLGSPDSLR 2643
Query: 115 VRLLP-ASTE*VYFVPPGGHIDRNPERVERKPYPQLQL 5
+ ASTE VYFV GGHIDRNPERV+RKPYPQLQL
Sbjct: 2644 LGYYQLASTEEVYFVLSGGHIDRNPERVQRKPYPQLQL 2681
Score = 54.3 bits (129), Expect(3) = 3e-50
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = -3
Query: 624 QGRAFS***WAGLMRSNLFRPSESNEGRRTIRFIKGDG 511
+GRAF WAGLM +L RPSESNEGRRTIRFI GDG
Sbjct: 2483 RGRAFLLLLWAGLMGFHLCRPSESNEGRRTIRFILGDG 2520
Score = 26.6 bits (57), Expect(3) = 3e-50
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 656 EVAYSPSSEGARAGLF 609
EVAYSPS EGAR F
Sbjct: 2472 EVAYSPSCEGARGRAF 2487
>ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
gb|AMQ23370.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
Length = 2992
Score = 167 bits (423), Expect(3) = 3e-50
Identities = 95/158 (60%), Positives = 100/158 (63%), Gaps = 1/158 (0%)
Frame = -2
Query: 475 RGGTTMDDTSRPRFFCIVRGPAAAEQXXXXXXXXXXXXXXXXXRAGRA*IQSGPDSSLFQ 296
R G MDD RPRFFCIV GPAAAE AGRA ++SGPDSSLFQ
Sbjct: 2524 RRGALMDDIPRPRFFCIVWGPAAAELRGIAAPSPGAILGPCSRWAGRASMKSGPDSSLFQ 2583
Query: 295 LLPRTQTGRSQLSWTGQVRRDLRGTGEGVSIDLF*DSNXXXXXXXXXXXXXXXXXXXXSK 116
LLPRTQTGRSQLSWT QVR DLRGTGEGVSIDLF DSN +
Sbjct: 2584 LLPRTQTGRSQLSWTSQVRSDLRGTGEGVSIDLFYDSNSRHARRFFYRYSLGLGSPDSLR 2643
Query: 115 VRLLP-ASTE*VYFVPPGGHIDRNPERVERKPYPQLQL 5
+ ASTE VYFV GGHIDRNPERV+RKPYPQLQL
Sbjct: 2644 LGYYQLASTEEVYFVLSGGHIDRNPERVQRKPYPQLQL 2681
Score = 54.3 bits (129), Expect(3) = 3e-50
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = -3
Query: 624 QGRAFS***WAGLMRSNLFRPSESNEGRRTIRFIKGDG 511
+GRAF WAGLM +L RPSESNEGRRTIRFI GDG
Sbjct: 2483 RGRAFLYLYWAGLMGFHLCRPSESNEGRRTIRFIYGDG 2520
Score = 26.6 bits (57), Expect(3) = 3e-50
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 656 EVAYSPSSEGARAGLF 609
EVAYSPS EGAR F
Sbjct: 2472 EVAYSPSCEGARGRAF 2487
>gb|OMO71560.1| hypothetical protein COLO4_28184 [Corchorus olitorius]
Length = 128
Score = 155 bits (391), Expect = 8e-45
Identities = 74/88 (84%), Positives = 76/88 (86%)
Frame = -3
Query: 375 LAPFPDLAADGRAGPEFRADQTPLCFSCSHARRPEDLSCPGLDKYVEIFVGPGRESQSIF 196
LAPFPDLAADGRAGPEFR DQT LC SCSH RRPEDLSCPGLDKYVEI VGPGRESQSIF
Sbjct: 14 LAPFPDLAADGRAGPEFRPDQTLLCLSCSHTRRPEDLSCPGLDKYVEILVGPGRESQSIF 73
Query: 195 SRIPTHATHGDLSIDRVEGSAPPTRQRL 112
SRIP HATHGDLSIDR+ APP + L
Sbjct: 74 SRIPYHATHGDLSIDRLRERAPPLNRLL 101
>gb|OMP02494.1| hypothetical protein CCACVL1_02786 [Corchorus capsularis]
Length = 159
Score = 119 bits (298), Expect = 2e-30
Identities = 71/116 (61%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
Frame = +1
Query: 1 PVVVAVGRAFVQLAPGSDLYDLRAVQSTPIP*RQVVT*PLTSRGSRALHSINGKISVRGV 180
PVVVAVGRAFV +APG DLYDLRA ISVRGV
Sbjct: 23 PVVVAVGRAFVLIAPGFDLYDLRA------------------------------ISVRGV 52
Query: 181 SWNPRKDRLRLPPRSHEDLYVLVQSRTTEIFRSACVGAAETKRSLVRSE---FRPG 339
NPRKDRLRLPPRSHEDLYVLVQSRTTEIFRSACVGAA+TK++L+ E RPG
Sbjct: 53 IRNPRKDRLRLPPRSHEDLYVLVQSRTTEIFRSACVGAAQTKKNLLALEPWADRPG 108
>gb|PKI40735.1| hypothetical protein CRG98_038873 [Punica granatum]
Length = 245
Score = 117 bits (293), Expect = 1e-28
Identities = 56/70 (80%), Positives = 58/70 (82%)
Frame = -3
Query: 336 GPEFRADQTPLCFSCSHARRPEDLSCPGLDKYVEIFVGPGRESQSIFSRIPTHATHGDLS 157
G +DQT LC SCSHARRPEDLSCP LDKYVEIFVGPGRES+SIFSRIPTHATHGDLS
Sbjct: 104 GQGLNSDQTHLCLSCSHARRPEDLSCPELDKYVEIFVGPGRESKSIFSRIPTHATHGDLS 163
Query: 156 IDRVEGSAPP 127
IDR A P
Sbjct: 164 IDRAVVEAKP 173
>ref|XP_013442821.1| hypothetical protein MTR_0082s0050 [Medicago truncatula]
gb|KEH16846.1| hypothetical protein MTR_0082s0050 [Medicago truncatula]
Length = 334
Score = 97.1 bits (240), Expect = 3e-20
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = -3
Query: 336 GPEFRADQTPLCFSCSHARRPEDLSCPGLDKYVEIFVGPGRESQSIFSRIPTHATHGDLS 157
GP +DQT L SCSHARRPEDLSCPGLDKYVEIFVGPGRESQSIFSRIP H +S
Sbjct: 143 GPGLNSDQTLLYLSCSHARRPEDLSCPGLDKYVEIFVGPGRESQSIFSRIPYHLFISPVS 202
Query: 156 IDRVEGSAPPTRQRLGYYLPLRNRCTLYRPEVI*IGTRSEL 34
R +G P P+ R L+ P + R+++
Sbjct: 203 FRR-KGLRIPN--------PVGGRTALFAPAWLIASPRNDI 234
>gb|OMP03655.1| hypothetical protein CCACVL1_02323, partial [Corchorus capsularis]
Length = 89
Score = 84.3 bits (207), Expect = 1e-17
Identities = 42/49 (85%), Positives = 44/49 (89%)
Frame = -2
Query: 340 GRA*IQSGPDSSLFQLLPRTQTGRSQLSWTGQVRRDLRGTGEGVSIDLF 194
GRA + PDSSLF+LLPRTQTGRSQLSWTGQVRRD RGTGEGVSIDLF
Sbjct: 41 GRAGPEFRPDSSLFELLPRTQTGRSQLSWTGQVRRDPRGTGEGVSIDLF 89
>gb|PHU03937.1| hypothetical protein BC332_29188 [Capsicum chinense]
Length = 560
Score = 62.0 bits (149), Expect = 1e-07
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -3
Query: 252 LDKYVEIFVGPGRESQSIFSRIPTHATHGDLSIDRVEGSAPP 127
LDKY+EIFV P RE Q IFSRIP HA+HGDLSID+ EG PP
Sbjct: 120 LDKYIEIFVEPWREYQLIFSRIPYHASHGDLSIDKSEG--PP 159