BLASTX nr result

ID: Ophiopogon22_contig00036617 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00036617
         (645 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK74895.1| uncharacterized protein A4U43_C03F11220 [Asparagu...   125   1e-30
ref|XP_020256705.1| extensin isoform X2 [Asparagus officinalis]       122   1e-29
ref|XP_020256702.1| extensin isoform X1 [Asparagus officinalis] ...   117   8e-28
ref|XP_010935257.1| PREDICTED: extensin-like [Elaeis guineensis]       66   5e-09

>gb|ONK74895.1| uncharacterized protein A4U43_C03F11220 [Asparagus officinalis]
          Length = 374

 Score =  125 bits (314), Expect = 1e-30
 Identities = 59/90 (65%), Positives = 70/90 (77%)
 Frame = +2

Query: 119 LAHLMEQRIDCLGLFLLIICFSYATSLLTHCEARKSLKHQRGTQAKALKQHLVIYYSTSD 298
           LA +MEQR DCLG+ L++  F YATS    CEARKSL H +G Q KA+KQHLV YYSTSD
Sbjct: 19  LASIMEQRFDCLGILLMLFYFFYATSFFASCEARKSLNHPKGPQTKAVKQHLVTYYSTSD 78

Query: 299 PNSNYLGSPYYMPPLFDDVMGPSSSSPQEN 388
           PNSNY+GSPYY+ P ++DVMGPSSS   +N
Sbjct: 79  PNSNYVGSPYYLRP-YEDVMGPSSSPLDQN 107


>ref|XP_020256705.1| extensin isoform X2 [Asparagus officinalis]
          Length = 352

 Score =  122 bits (305), Expect = 1e-29
 Identities = 57/86 (66%), Positives = 67/86 (77%)
 Frame = +2

Query: 131 MEQRIDCLGLFLLIICFSYATSLLTHCEARKSLKHQRGTQAKALKQHLVIYYSTSDPNSN 310
           MEQR DCLG+ L++  F YATS    CEARKSL H +G Q KA+KQHLV YYSTSDPNSN
Sbjct: 1   MEQRFDCLGILLMLFYFFYATSFFASCEARKSLNHPKGPQTKAVKQHLVTYYSTSDPNSN 60

Query: 311 YLGSPYYMPPLFDDVMGPSSSSPQEN 388
           Y+GSPYY+ P ++DVMGPSSS   +N
Sbjct: 61  YVGSPYYLRP-YEDVMGPSSSPLDQN 85


>ref|XP_020256702.1| extensin isoform X1 [Asparagus officinalis]
 ref|XP_020256703.1| extensin isoform X1 [Asparagus officinalis]
 ref|XP_020256704.1| extensin isoform X1 [Asparagus officinalis]
          Length = 353

 Score =  117 bits (293), Expect = 8e-28
 Identities = 57/87 (65%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
 Frame = +2

Query: 131 MEQRIDCLGLFLLIICFSYATSLLTHC-EARKSLKHQRGTQAKALKQHLVIYYSTSDPNS 307
           MEQR DCLG+ L++  F YATS    C EARKSL H +G Q KA+KQHLV YYSTSDPNS
Sbjct: 1   MEQRFDCLGILLMLFYFFYATSFFASCAEARKSLNHPKGPQTKAVKQHLVTYYSTSDPNS 60

Query: 308 NYLGSPYYMPPLFDDVMGPSSSSPQEN 388
           NY+GSPYY+ P ++DVMGPSSS   +N
Sbjct: 61  NYVGSPYYLRP-YEDVMGPSSSPLDQN 86


>ref|XP_010935257.1| PREDICTED: extensin-like [Elaeis guineensis]
          Length = 356

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 45/98 (45%), Positives = 60/98 (61%), Gaps = 12/98 (12%)
 Frame = +2

Query: 131 MEQRIDCLGLF-LLIICFSYATSLLTHCEARKS-----------LKHQRGTQAKALKQHL 274
           M+QRID   LF  L++ FS AT  + HC+AR S           +KH   +    + +HL
Sbjct: 1   MDQRIDFTALFCFLLLHFSTATFFI-HCDARSSRHSQNSLGFQAVKHPHRSSQLKVSKHL 59

Query: 275 VIYYSTSDPNSNYLGSPYYMPPLFDDVMGPSSSSPQEN 388
            I +S+SDP  NY+GSPY +PP FDD+MGP +SSP EN
Sbjct: 60  DI-FSSSDP--NYVGSPYSLPP-FDDIMGP-TSSPDEN 92


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