BLASTX nr result
ID: Ophiopogon22_contig00035849
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00035849
(483 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OAY66084.1| Pentatricopeptide repeat-containing protein [Anan... 83 2e-15
ref|XP_020092866.1| pentatricopeptide repeat-containing protein ... 83 2e-15
ref|XP_019078838.1| PREDICTED: pentatricopeptide repeat-containi... 76 5e-13
gb|PKA46700.1| Pentatricopeptide repeat-containing protein [Apos... 73 7e-12
ref|XP_016546623.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-11
ref|XP_020691698.1| pentatricopeptide repeat-containing protein ... 72 1e-11
gb|PHU03566.1| Pentatricopeptide repeat-containing protein, chlo... 72 1e-11
ref|XP_020673278.1| pentatricopeptide repeat-containing protein ... 71 1e-11
gb|PIA52628.1| hypothetical protein AQUCO_01000479v1 [Aquilegia ... 72 2e-11
gb|PKU61116.1| Pentatricopeptide repeat-containing protein [Dend... 71 2e-11
gb|PHT34955.1| hypothetical protein CQW23_26755 [Capsicum baccatum] 71 2e-11
gb|KVH87630.1| Pentatricopeptide repeat-containing protein [Cyna... 71 3e-11
ref|XP_010255142.1| PREDICTED: pentatricopeptide repeat-containi... 70 4e-11
gb|OTG14153.1| putative tetratricopeptide-like helical domain, D... 70 6e-11
ref|XP_021981497.1| pentatricopeptide repeat-containing protein ... 70 6e-11
ref|XP_004251424.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-10
ref|XP_019066798.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-10
ref|XP_019423807.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-10
ref|XP_020272781.1| pentatricopeptide repeat-containing protein ... 69 1e-10
ref|XP_019229300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 69 2e-10
>gb|OAY66084.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
Length = 651
Score = 82.8 bits (203), Expect = 2e-15
Identities = 40/67 (59%), Positives = 47/67 (70%)
Frame = -3
Query: 442 DA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GVEPNKRDYVNVLSVCA 263
DA K+ D PERDV+ WS +INGYV+D F EG+VLFR ML EPN+ VNVLS CA
Sbjct: 231 DARKVFDEMPERDVLCWSVLINGYVQDSHFKEGLVLFRAMLGENKEPNESILVNVLSACA 290
Query: 262 SLGTVEQ 242
LG +EQ
Sbjct: 291 HLGAIEQ 297
>ref|XP_020092866.1| pentatricopeptide repeat-containing protein At5g66520-like [Ananas
comosus]
Length = 671
Score = 82.8 bits (203), Expect = 2e-15
Identities = 40/67 (59%), Positives = 47/67 (70%)
Frame = -3
Query: 442 DA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GVEPNKRDYVNVLSVCA 263
DA K+ D PERDV+ WS +INGYV+D F EG+VLFR ML EPN+ VNVLS CA
Sbjct: 251 DARKVFDEMPERDVLCWSVLINGYVQDSHFKEGLVLFRAMLGENKEPNESILVNVLSACA 310
Query: 262 SLGTVEQ 242
LG +EQ
Sbjct: 311 HLGAIEQ 317
>ref|XP_019078838.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 515
Score = 75.9 bits (185), Expect = 5e-13
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Frame = -3
Query: 469 WILMLAGC------DDA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GV 308
W +M+ G A +M + P+RDV+SWS +INGYV++ RF EG+ LF+ M+ +
Sbjct: 80 WNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKI 139
Query: 307 EPNKRDYVNVLSVCASLGTVEQ 242
EPN+ VN LS CA LG +EQ
Sbjct: 140 EPNESVLVNALSACAHLGAMEQ 161
>gb|PKA46700.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 627
Score = 72.8 bits (177), Expect = 7e-12
Identities = 35/68 (51%), Positives = 47/68 (69%)
Frame = -3
Query: 445 DDA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GVEPNKRDYVNVLSVC 266
DDA +M D P++ VISWS +ING+V+ +F + LFR ML ++PN+ YVNV S C
Sbjct: 206 DDARQMFDEMPQKGVISWSVMINGFVQSSQFRGALELFREMLRREIDPNESVYVNVFSAC 265
Query: 265 ASLGTVEQ 242
A LG+VEQ
Sbjct: 266 AHLGSVEQ 273
>ref|XP_016546623.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic [Capsicum annuum]
gb|PHT69026.1| Pentatricopeptide repeat-containing protein, chloroplastic
[Capsicum annuum]
Length = 506
Score = 72.0 bits (175), Expect = 1e-11
Identities = 38/87 (43%), Positives = 56/87 (64%)
Frame = -3
Query: 442 DA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GVEPNKRDYVNVLSVCA 263
+A KM + PERDV+SW+ +I G+VK+G F EG++ FR M GVEP+ ++VLS CA
Sbjct: 165 NAVKMFNEMPERDVVSWTALIGGFVKNGHFEEGLMWFREMQLHGVEPDYVTMISVLSACA 224
Query: 262 SLGTVEQVVVILLLASKLIFFTKISDS 182
+LGT+ I L + IF ++ D+
Sbjct: 225 NLGTLG----ISLWLHRFIFGSRFKDN 247
>ref|XP_020691698.1| pentatricopeptide repeat-containing protein At5g06540-like
[Dendrobium catenatum]
gb|PKU87528.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 624
Score = 72.0 bits (175), Expect = 1e-11
Identities = 34/68 (50%), Positives = 46/68 (67%)
Frame = -3
Query: 445 DDA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GVEPNKRDYVNVLSVC 266
DDA ++ D P + VISWS +ING V++ RF E + LF ML +EPN+ YVN+ S+C
Sbjct: 203 DDARQLFDDMPVKGVISWSVMINGLVQNNRFREALELFNKMLMEKMEPNESIYVNIFSIC 262
Query: 265 ASLGTVEQ 242
A LG +EQ
Sbjct: 263 AHLGAIEQ 270
>gb|PHU03566.1| Pentatricopeptide repeat-containing protein, chloroplastic
[Capsicum chinense]
Length = 841
Score = 72.0 bits (175), Expect = 1e-11
Identities = 38/87 (43%), Positives = 56/87 (64%)
Frame = -3
Query: 442 DA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GVEPNKRDYVNVLSVCA 263
+A KM + PERDV+SW+ +I G+VK+G F EG++ FR M GVEP+ ++VLS CA
Sbjct: 165 NAVKMFNEMPERDVVSWTALIGGFVKNGHFEEGLMWFRQMQLHGVEPDYVTMISVLSACA 224
Query: 262 SLGTVEQVVVILLLASKLIFFTKISDS 182
+LGT+ I L + IF ++ D+
Sbjct: 225 NLGTLG----ISLWLHRFIFGSRFKDN 247
>ref|XP_020673278.1| pentatricopeptide repeat-containing protein At5g06540-like
[Dendrobium catenatum]
Length = 276
Score = 70.9 bits (172), Expect = 1e-11
Identities = 34/68 (50%), Positives = 46/68 (67%)
Frame = -3
Query: 445 DDA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GVEPNKRDYVNVLSVC 266
DDA ++ D P + VISWS +ING ++ RF+E + LF ML +EPN+ YVNV S+C
Sbjct: 203 DDARQVFDDMPGKGVISWSVMINGLFQNNRFSEALELFNKMLMEKMEPNESIYVNVFSIC 262
Query: 265 ASLGTVEQ 242
A LG +EQ
Sbjct: 263 AHLGAIEQ 270
>gb|PIA52628.1| hypothetical protein AQUCO_01000479v1 [Aquilegia coerulea]
Length = 504
Score = 71.6 bits (174), Expect = 2e-11
Identities = 33/69 (47%), Positives = 46/69 (66%)
Frame = -3
Query: 448 CDDA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GVEPNKRDYVNVLSV 269
CDDA K+ D PER+ +SWS +I GYV+ RF E +++F ML VEPN+ +VL+
Sbjct: 162 CDDAQKVADEMPERNTVSWSALIAGYVQGNRFKEALLVFEDMLLEQVEPNQTTLSSVLTA 221
Query: 268 CASLGTVEQ 242
CA LG ++Q
Sbjct: 222 CAQLGALDQ 230
>gb|PKU61116.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 342
Score = 70.9 bits (172), Expect = 2e-11
Identities = 34/68 (50%), Positives = 46/68 (67%)
Frame = -3
Query: 445 DDA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GVEPNKRDYVNVLSVC 266
DDA ++ D P + VISWS +ING ++ RF+E + LF ML +EPN+ YVNV S+C
Sbjct: 203 DDARQVFDDMPGKGVISWSVMINGLFQNNRFSEALELFNKMLMEKMEPNESIYVNVFSIC 262
Query: 265 ASLGTVEQ 242
A LG +EQ
Sbjct: 263 AHLGAIEQ 270
>gb|PHT34955.1| hypothetical protein CQW23_26755 [Capsicum baccatum]
Length = 506
Score = 71.2 bits (173), Expect = 2e-11
Identities = 38/87 (43%), Positives = 56/87 (64%)
Frame = -3
Query: 442 DA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GVEPNKRDYVNVLSVCA 263
+A K+ D PERDV+SW+ +I G+VK+G F EG++ FR M GVEP+ ++VLS CA
Sbjct: 165 NAVKVFDEMPERDVVSWTALIGGFVKNGIFEEGLMWFREMQLHGVEPDYVTMISVLSACA 224
Query: 262 SLGTVEQVVVILLLASKLIFFTKISDS 182
+LGT+ I L + IF ++ D+
Sbjct: 225 NLGTLG----ISLWLHRFIFGSRFKDN 247
>gb|KVH87630.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 614
Score = 70.9 bits (172), Expect = 3e-11
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Frame = -3
Query: 469 WILMLAG------CDDA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GV 308
W +M+AG DD KM D PE+D+ISWS +I GYV++G +G F+ M G+
Sbjct: 183 WNVMMAGYARMGQIDDLEKMFDEMPEKDIISWSSLITGYVQNGYLEQGFDCFKRMRDLGL 242
Query: 307 EPNKRDYVNVLSVCASLGTVEQVVVI 230
PN+ V VLS CA LG +E+ ++I
Sbjct: 243 LPNEAILVMVLSACAQLGLIEKGILI 268
>ref|XP_010255142.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
chloroplastic-like [Nelumbo nucifera]
Length = 460
Score = 70.5 bits (171), Expect = 4e-11
Identities = 43/117 (36%), Positives = 64/117 (54%)
Frame = -3
Query: 445 DDA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GVEPNKRDYVNVLSVC 266
D+A ++ D P +DV+SW+ +INGY K+G F E + +F + G+EPNK +++ LS C
Sbjct: 147 DEARELFDRMPRKDVVSWNALINGYTKNGYFKEALEVFNTIQDLGLEPNKVTFLSALSSC 206
Query: 265 ASLGTVEQVVVILLLASKLIFFTKISDSGSTDYFYAIFESIMPSSSFYNTIIRTFLR 95
A LG +E+ I L + + +S + YA SI S YN RTF R
Sbjct: 207 AELGAIEKGKEIEELLNMSELGSDLSIETALLDMYAKCGSIAES---YNVFRRTFPR 260
>gb|OTG14153.1| putative tetratricopeptide-like helical domain, DYW domain protein
[Helianthus annuus]
Length = 585
Score = 70.1 bits (170), Expect = 6e-11
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Frame = -3
Query: 469 WILMLAG------CDDA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GV 308
W +++AG DA K+ + PERD +SWS +I GYV++G EG+ LF M+ GV
Sbjct: 150 WNVVIAGWVKLGRVADARKVFNEMPERDAVSWSSLITGYVRNGLLEEGVELFERMVEVGV 209
Query: 307 EPNKRDYVNVLSVCASLGTVEQVVVI 230
PN+ V V S CA LG VE V I
Sbjct: 210 VPNEAGLVMVFSACAQLGLVENAVRI 235
>ref|XP_021981497.1| pentatricopeptide repeat-containing protein At3g62890-like
[Helianthus annuus]
Length = 610
Score = 70.1 bits (170), Expect = 6e-11
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Frame = -3
Query: 469 WILMLAG------CDDA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GV 308
W +++AG DA K+ + PERD +SWS +I GYV++G EG+ LF M+ GV
Sbjct: 175 WNVVIAGWVKLGRVADARKVFNEMPERDAVSWSSLITGYVRNGLLEEGVELFERMVEVGV 234
Query: 307 EPNKRDYVNVLSVCASLGTVEQVVVI 230
PN+ V V S CA LG VE V I
Sbjct: 235 VPNEAGLVMVFSACAQLGLVENAVRI 260
>ref|XP_004251424.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic isoform X2 [Solanum lycopersicum]
Length = 507
Score = 69.3 bits (168), Expect = 1e-10
Identities = 33/65 (50%), Positives = 47/65 (72%)
Frame = -3
Query: 442 DA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GVEPNKRDYVNVLSVCA 263
+A K+ D P+RDVISW+ ++ G+VK+G F EG+V FR M GVEP+ ++VLS CA
Sbjct: 166 NAVKVFDEIPDRDVISWTALVGGFVKNGLFEEGLVWFREMQLSGVEPDYVTMISVLSACA 225
Query: 262 SLGTV 248
+LGT+
Sbjct: 226 NLGTL 230
>ref|XP_019066798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic isoform X1 [Solanum lycopersicum]
Length = 524
Score = 69.3 bits (168), Expect = 1e-10
Identities = 33/65 (50%), Positives = 47/65 (72%)
Frame = -3
Query: 442 DA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GVEPNKRDYVNVLSVCA 263
+A K+ D P+RDVISW+ ++ G+VK+G F EG+V FR M GVEP+ ++VLS CA
Sbjct: 166 NAVKVFDEIPDRDVISWTALVGGFVKNGLFEEGLVWFREMQLSGVEPDYVTMISVLSACA 225
Query: 262 SLGTV 248
+LGT+
Sbjct: 226 NLGTL 230
>ref|XP_019423807.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33760
[Lupinus angustifolius]
gb|OIV93199.1| hypothetical protein TanjilG_24414 [Lupinus angustifolius]
Length = 591
Score = 69.3 bits (168), Expect = 1e-10
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 12/113 (10%)
Frame = -3
Query: 445 DDA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GVEPNKRDYVNVLSVC 266
D A K+ D PER V++W+ +I+GY ++G EG+VLFR ML GV P+ +V+VLS C
Sbjct: 169 DVARKVFDEMPERSVVAWNSMISGYEQNGLANEGVVLFRKMLELGVRPDSTTFVSVLSAC 228
Query: 265 ASLGTVE------------QVVVILLLASKLIFFTKISDSGSTDYFYAIFESI 143
+ LG ++ + V ++LA+ LI S G+ +A+F+S+
Sbjct: 229 SQLGILDLGYWVHEYIISNGIHVNVILATALI--NMFSRCGNLSRAHAVFDSL 279
>ref|XP_020272781.1| pentatricopeptide repeat-containing protein At5g66520-like
[Asparagus officinalis]
Length = 439
Score = 68.9 bits (167), Expect = 1e-10
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Frame = -3
Query: 442 DA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMV------LFRGMLA*GVEPNKRDYVN 281
DA +M D +RDV+ WS +ING+V+ F EG+ LFR ML GVEPN+ +VN
Sbjct: 13 DARRMFDEAGDRDVVCWSVMINGFVRGSLFKEGLYSQQGLGLFREMLVGGVEPNESVFVN 72
Query: 280 VLSVCASLGTVEQ 242
V+S CA LG +EQ
Sbjct: 73 VISACAYLGALEQ 85
>ref|XP_019229300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Nicotiana
attenuata]
Length = 438
Score = 68.6 bits (166), Expect = 2e-10
Identities = 34/65 (52%), Positives = 46/65 (70%)
Frame = -3
Query: 442 DA*KMIDGRPERDVISWSEIINGYVKDGRFTEGMVLFRGMLA*GVEPNKRDYVNVLSVCA 263
+A KM D PERDVISW+ +I G+VK+G F E +V F+ M GVEP+ ++VLS CA
Sbjct: 97 NAVKMFDEIPERDVISWTALIGGFVKNGLFEEALVWFQEMQLSGVEPDYVTMISVLSACA 156
Query: 262 SLGTV 248
+LGT+
Sbjct: 157 NLGTL 161