BLASTX nr result

ID: Ophiopogon22_contig00035749 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00035749
         (650 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020252821.1| ubiquitin carboxyl-terminal hydrolase 2-like...    53   7e-10

>ref|XP_020252821.1| ubiquitin carboxyl-terminal hydrolase 2-like [Asparagus
           officinalis]
 gb|ONK77185.1| uncharacterized protein A4U43_C02F3970 [Asparagus officinalis]
          Length = 742

 Score = 53.1 bits (126), Expect(3) = 7e-10
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
 Frame = -2

Query: 589 LRIVFDKLDI*RDYPLTNKLYTLFIVSS-SDVPLISYLYDIFSWICDVTLEFN-TQQQDN 416
           LR+ F K  +  D+P+T+ L+ LF+ +S  D  + S    +F  IC +  ++   QQQD 
Sbjct: 157 LRLYFPKSGLNPDHPITSDLWNLFLATSYGDADIESSHKSLFDSICSIKQKYKENQQQDC 216

Query: 415 HEFLGCFRNYLLEERISYVDDIFFKVY 335
           HEFLG     L+ E  S + D+F  ++
Sbjct: 217 HEFLGHLHEVLMLENNSLIPDVFEGIF 243



 Score = 34.7 bits (78), Expect(3) = 7e-10
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -3

Query: 648 NYENTCFYNAVLQNLLSMNVCELF 577
           N+ +TC+YN+VLQNLLSM    L+
Sbjct: 137 NFGSTCYYNSVLQNLLSMKRLRLY 160



 Score = 23.1 bits (48), Expect(3) = 7e-10
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = -1

Query: 350 IFQGI-PTQYTSCQCGYTLTS 291
           +F+GI     + CQCG+T TS
Sbjct: 238 VFEGIFAVTLSCCQCGHTNTS 258


Top