BLASTX nr result

ID: Ophiopogon22_contig00035741 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00035741
         (751 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256502.1| putative F-box/LRR-repeat protein At5g54820 ...    47   9e-06

>ref|XP_020256502.1| putative F-box/LRR-repeat protein At5g54820 [Asparagus officinalis]
          Length = 507

 Score = 47.0 bits (110), Expect(2) = 9e-06
 Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = +1

Query: 415 KHFGGLRSLRLKDVDIIDDTFHSVLADCPXXXXXXXXXXXXXXXASISGSKLKLVRVTMA 594
           K    L SL L DV+I D T   +LADCP                SISG  L+L  +T+ 
Sbjct: 167 KRLCNLHSLSLTDVNIDDKTLQGILADCPLLESLSLRNCHHLESVSISGQDLRLESLTIV 226

Query: 595 EC-RVYSLEIFAPKLQ 639
           +C  +  LEI AP+L+
Sbjct: 227 DCLGMCFLEISAPRLR 242



 Score = 31.2 bits (69), Expect(2) = 9e-06
 Identities = 16/25 (64%), Positives = 17/25 (68%)
 Frame = +3

Query: 342 SLFD*VSLVHPSLSYCKFGAPSEFK 416
           SLFD VSL H SLS CKF    +FK
Sbjct: 143 SLFDCVSLTHLSLSCCKFCTHLDFK 167


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