BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00035707
         (553 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX71218.1| putative retrotransposon Ty1-copia subclass prote...    65   3e-10
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...    65   6e-09
ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712...    64   1e-08
gb|PRQ41601.1| putative tripeptidyl-peptidase II [Rosa chinensis]      63   1e-08
gb|PRQ51350.1| putative RNA-directed DNA polymerase [Rosa chinen...    63   1e-08
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...    63   3e-08
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...    63   3e-08
gb|PHT55765.1| hypothetical protein CQW23_04251 [Capsicum baccatum]    62   5e-08
gb|AAK29467.1| polyprotein-like [Solanum chilense]                     59   1e-07
gb|KYP77941.1| Retrovirus-related Pol polyprotein from transposo...    60   2e-07
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    57   3e-07
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]         60   3e-07
gb|KYP53542.1| Retrovirus-related Pol polyprotein from transposo...    59   3e-07
gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [...    60   3e-07
gb|ESQ46603.1| hypothetical protein EUTSA_v10000703mg, partial [...    57   5e-07
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]               53   5e-07
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]               53   5e-07
gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]    59   6e-07
gb|AFB73912.1| polyprotein [Citrus sinensis]                           52   2e-06
gb|POO02710.1| hypothetical protein TorRG33x02_016960, partial [...    55   2e-06

>gb|PNX71218.1| putative retrotransposon Ty1-copia subclass protein [Trifolium
           pratense]
 gb|PNY02521.1| putative retrotransposon Ty1-copia subclass protein [Trifolium
           pratense]
          Length = 257

 Score = 65.5 bits (158), Expect(2) = 3e-10
 Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
 Frame = -1

Query: 478 DSNLKMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDKK-- 305
           DS +K EV++ DG GNF LW+ + + LLA++     L  +  KP  ++D++  ++ +K  
Sbjct: 4   DSGVKFEVERFDGTGNFRLWERRVKDLLAQQGLQKAL--RETKPTDMADDDWLELQEKAA 61

Query: 304 -LIRQ*PSVS*IVCTPYYARENCLVLRTSWRLYLKSTMNKLIVKTNLYRLRMKEDTTFTQ 128
            LIR   S   +           ++ +   +   K+ MN+L  K  LY L+M+E +   Q
Sbjct: 62  GLIRLCVSDEVMYHILDLTSPKEVLDKLESQYISKTRMNRLFTKMRLYSLKMREGSDLQQ 121

Query: 127 HLNSFTELVNDLIVL 83
           H+N+F  ++ +L+ L
Sbjct: 122 HVNTFNNIITELVKL 136



 Score = 26.9 bits (58), Expect(2) = 3e-10
 Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 3/24 (12%)
 Frame = -3

Query: 80  VKIEDWD---MLLLSLPASYDYLV 18
           VKI+D D   MLL SLP+SY +LV
Sbjct: 138 VKIDDEDSAIMLLCSLPSSYKHLV 161


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
 Frame = -1

Query: 466 KMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDKKLIRQ*P 287
           K +++K DGK  F +W+ Q + +L +      L GK KKP  ++DE+  ++D+K +    
Sbjct: 6   KFDIEKFDGKICFSIWKVQMKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDEKAL---- 61

Query: 286 SVS*IVCTPYYARE--NCLVLRTSW----RLYL-KSTMNKLIVKTNLYRLRMKEDTTFTQ 128
           S   +  +    RE  N       W     LY+ KS  NKL +K  LY +RM E T    
Sbjct: 62  SAIQLCLSKEVLREVANETTAAALWLKLESLYMTKSLANKLRLKERLYTIRMVEGTPIQS 121

Query: 127 HLNSFTELVNDLIVLE 80
           HLN F  ++ DL  +E
Sbjct: 122 HLNEFNSIIMDLENIE 137


>ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712082 [Phoenix
           dactylifera]
          Length = 2199

 Score = 63.5 bits (153), Expect(2) = 1e-08
 Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
 Frame = -1

Query: 475 SNLKMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISD-EE*TKIDKKLI 299
           SNLK + +K DGKGNF+LWQ + + LL ++    VL  K  K   I D EE  +I    I
Sbjct: 385 SNLKADFEKFDGKGNFILWQQRVKDLLIQQRIYKVLVKKRPKKISIEDWEELEEIAFSTI 444

Query: 298 RQ--*PSVS*IVCTPYYARENCLVLRTSWRLYLKSTMNKLIVKTNLYRLRMKEDTTFTQH 125
           R      V   +C    A+E  L  R       KS  NKL +K  LY LRM E      H
Sbjct: 445 RMCLADQVLPEICLETTAKE--LWERLENTYMGKSMTNKLWLKKQLYSLRMPEGGDLISH 502

Query: 124 LNSFTELVNDLIVLE 80
           +  F ++ ++++ L+
Sbjct: 503 IQKFNQVCSEIMSLD 517



 Score = 23.1 bits (48), Expect(2) = 1e-08
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -3

Query: 71  EDWDMLLL-SLPASYDYLVIVI 9
           ED  +LLL SLP SYD L+  +
Sbjct: 523 EDMTLLLLYSLPGSYDGLITTL 544


>gb|PRQ41601.1| putative tripeptidyl-peptidase II [Rosa chinensis]
          Length = 1371

 Score = 62.8 bits (151), Expect(2) = 1e-08
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
 Frame = -1

Query: 487 MDGDSNLKMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDK 308
           M   S    +V++ DGKGNF LWQ + + +L ++     L GK+ KP K+SDE+  +++ 
Sbjct: 191 MASSSVSHFKVEQFDGKGNFTLWQRRVKDILVQQGLAKPLKGKDAKPVKMSDEDWEELES 250

Query: 307 KLIRQ*PSVS*IVCTPYYARENCLVLRTS-W----RLYL-KSTMNKLIVKTNLYRLRMKE 146
           + +    ++   +        N +   T  W    +L+L K    KL +K +LY+L+M E
Sbjct: 251 RCV---STIRLYIADNIINNVNNVDSATQLWEKMEKLHLGKGLQTKLNLKRDLYKLKMGE 307

Query: 145 DTTFTQHLNSFTELVNDL 92
             +  +H+N F  LV+ L
Sbjct: 308 GASLMEHMNVFRGLVDQL 325



 Score = 23.9 bits (50), Expect(2) = 1e-08
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
 Frame = -3

Query: 80  VKIEDWD---MLLLSLPASYDYLVIVI 9
           VKIE+ D   +LL SLP SY+ ++  I
Sbjct: 330 VKIEEEDQALLLLTSLPDSYENIITTI 356


>gb|PRQ51350.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 460

 Score = 62.8 bits (151), Expect(2) = 1e-08
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
 Frame = -1

Query: 487 MDGDSNLKMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDK 308
           M   S    +V++ DGKGNF LWQ + + +L ++     L GK+ KP K+SDE+  +++ 
Sbjct: 1   MASSSVSHFKVEQFDGKGNFTLWQRRVKDILVQQGLAKPLKGKDAKPVKMSDEDWEELES 60

Query: 307 KLIRQ*PSVS*IVCTPYYARENCLVLRTS-W----RLYL-KSTMNKLIVKTNLYRLRMKE 146
           + +    ++   +        N +   T  W    +L+L K    KL +K +LY+L+M E
Sbjct: 61  RCV---STIRLYIADNIINNVNNVDSATQLWEKMEKLHLGKGLQTKLNLKRDLYKLKMGE 117

Query: 145 DTTFTQHLNSFTELVNDL 92
             +  +H+N F  LV+ L
Sbjct: 118 GASLMEHMNVFRGLVDQL 135



 Score = 23.9 bits (50), Expect(2) = 1e-08
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
 Frame = -3

Query: 80  VKIEDWD---MLLLSLPASYDYLVIVI 9
           VKIE+ D   +LL SLP SY+ ++  I
Sbjct: 140 VKIEEEDQALLLLTSLPDSYENIITTI 166


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
 Frame = -1

Query: 475 SNLKMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDKKLIR 296
           S+ K +V+K  GK +F LW+ + R +L ++     LSGK+K P  +S+E+       ++ 
Sbjct: 526 SSTKYDVEKFTGKNSFSLWRIKMRAVLVQQGLLKALSGKDKLPSTLSEEQ----KDDMLE 581

Query: 295 Q*PSVS*IVCTPYYARE-------NCLVLRTSWRLYLKSTMNKLIVKTNLYRLRMKEDTT 137
           +  S   +       RE       + L LR   +   KS  N+L +K  LY L+M+E T 
Sbjct: 582 RAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGTP 641

Query: 136 FTQHLNSFTELVNDLIVLESR 74
            +QHL+ F  ++ DL  ++++
Sbjct: 642 VSQHLDKFNSIIMDLNNIDNK 662


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
 Frame = -1

Query: 475 SNLKMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDKKLIR 296
           S+ K +V+K  GK +F LW+ + R +L ++     LSGK+K P  +S+E+       ++ 
Sbjct: 505 SSTKYDVEKFTGKNSFSLWRIKMRAVLVQQGLLKALSGKDKLPSTLSEEQ----KDDMLE 560

Query: 295 Q*PSVS*IVCTPYYARE-------NCLVLRTSWRLYLKSTMNKLIVKTNLYRLRMKEDTT 137
           +  S   +       RE       + L LR   +   KS  N+L +K  LY L+M+E T 
Sbjct: 561 RAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGTP 620

Query: 136 FTQHLNSFTELVNDLIVLESR 74
            +QHL+ F  ++ DL  ++++
Sbjct: 621 VSQHLDKFNSIIMDLNNIDNK 641


>gb|PHT55765.1| hypothetical protein CQW23_04251 [Capsicum baccatum]
          Length = 553

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 7/134 (5%)
 Frame = -1

Query: 472 NLKMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDKKLIRQ 293
           ++K +++K DGK +F +W+ Q   +L +     VLSGK+ KP   ++E+  ++D+K +  
Sbjct: 2   SMKFDIEKFDGKISFAIWRVQMLAVLTQNGLKKVLSGKSAKPATTTEEQWEEMDEKAL-- 59

Query: 292 *PSVS*IVCTPYYARE--NCLVLRTSW----RLYL-KSTMNKLIVKTNLYRLRMKEDTTF 134
             S+  +  +    RE  N       W     LY+ KS  NKL +K  L+ LRM E T  
Sbjct: 60  --SIIQLCLSREVLREVINEKTAAGIWSKLESLYMTKSLANKLRLKERLFTLRMSEGTPI 117

Query: 133 TQHLNSFTELVNDL 92
             HL  F  ++ DL
Sbjct: 118 QSHLGEFNSIIIDL 131


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 58.9 bits (141), Expect(2) = 1e-07
 Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
 Frame = -1

Query: 475 SNLKMEVDKLDG-KGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDKKLI 299
           S +K EV K +G K  F +WQ + + LL ++     L GK+KKPE +  E+  ++D+K  
Sbjct: 2   SGVKYEVAKFNGDKPVFSMWQRRMKDLLIQQGLHKALGGKSKKPESMKLEDWEELDEKAA 61

Query: 298 R--Q*PSVS*IVCTPYYARENCLVLRTSWRLYLKSTM-NKLIVKTNLYRLRMKEDTTFTQ 128
              +      +V         C +      LY+  T+ NKL +K  LY L M E T F  
Sbjct: 62  SAIRLHLTDDVVNNIVDEESACGIWTKLENLYMSKTLTNKLYLKKQLYTLHMDEGTNFLS 121

Query: 127 HLNSFTELVNDL 92
           HLN    L+  L
Sbjct: 122 HLNVLNGLITQL 133



 Score = 24.3 bits (51), Expect(2) = 1e-07
 Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
 Frame = -3

Query: 80  VKIEDWD---MLLLSLPASYDYLVIVI 9
           VKIE+ D   +LL SLP+SYD L   I
Sbjct: 138 VKIEEEDKRIVLLNSLPSSYDTLSTTI 164


>gb|KYP77941.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 270

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
 Frame = -1

Query: 475 SNLKMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDKKLIR 296
           + LK EV   DG+ +F LWQ   +  L ++  D+ L  + KKP +I + + + I KK + 
Sbjct: 2   NTLKFEVPLFDGRTDFTLWQCTIQDYLVQQGLDLALQDE-KKPSEIKESDWSTIQKKAVS 60

Query: 295 Q*-----PSVS*IVCTPYYARENCLVLRTSWRLYLKSTMNKLIVKTNLYRLRMKEDTTFT 131
                  P +   V      ++    L + +    K+  N+L++K +LY L+M+E    T
Sbjct: 61  TIRLALAPQIKVTVLKETSPKKLWDTLESKFAS--KTLTNRLMMKMDLYSLKMEEGGNVT 118

Query: 130 QHLNSFTELVNDLI 89
            H+N F E+V+ L+
Sbjct: 119 DHINKFNEMVSRLL 132


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease
 emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
          Length = 1328

 Score = 56.6 bits (135), Expect(2) = 3e-07
 Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
 Frame = -1

Query: 475 SNLKMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDKKL-- 302
           S +K EV K +G   F  WQ + R LL ++    VL   +KKP+ +  E+   +D++   
Sbjct: 2   SGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAAS 61

Query: 301 -IRQ*PSVS*IVCTPYYARENCLVLRTSWR-LYLKSTM-NKLIVKTNLYRLRMKEDTTFT 131
            IR    +S  V       +    + T    LY+  T+ NKL +K  LY L M E T F 
Sbjct: 62  AIRL--HLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFL 119

Query: 130 QHLNSFTELVNDL 92
            HLN F  L+  L
Sbjct: 120 SHLNVFNGLITQL 132



 Score = 25.4 bits (54), Expect(2) = 3e-07
 Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
 Frame = -3

Query: 80  VKIEDWD---MLLLSLPASYDYLVIVI 9
           VKIE+ D   +LL SLP+SYD L   I
Sbjct: 137 VKIEEEDKAILLLNSLPSSYDNLATTI 163


>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
          Length = 478

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
 Frame = -1

Query: 469 LKMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDKKL---I 299
           +K ++ K DG GNF LWQ + + LLA++E    L G   KP K+ D++  ++  +    I
Sbjct: 88  MKFDLVKFDGFGNFGLWQTRVKDLLAQQEVSKALKGV--KPAKMEDDDCEEMQLQAAATI 145

Query: 298 RQ*PSVS*IVCTPYYARENCLVLRTSWRLYLKSTMNKLIVKTNLYRLRMKEDTTFTQHLN 119
           R+  S   +           +  +   +   K+  NK  +K  LY L+M+E    T H+N
Sbjct: 146 RRCLSDQIMYHVMEETSPKIIWEKLEAQFMSKTLTNKRYLKQKLYGLKMQEGADLTAHVN 205

Query: 118 SFTELVNDLIVLE 80
            F +LV DL+ ++
Sbjct: 206 VFNQLVTDLVKMD 218


>gb|KYP53542.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 197

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 10/136 (7%)
 Frame = -1

Query: 466 KMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDKKLIRQ*P 287
           K E+   DGK NF++WQ   + +L ++  D  L  +++KP  I++ E ++I KK +    
Sbjct: 7   KFEIPLFDGKTNFMIWQCTVQDILVQQGLDQAL--EDEKPSNINEREWSQIQKKAV---- 60

Query: 286 SVS*IVCTPYYARENCLVLRTS-----WR----LYL-KSTMNKLIVKTNLYRLRMKEDTT 137
           S   +  TP      C VL+ +     W     +Y  KS  N+L +K  LY+L+M+    
Sbjct: 61  STIRLALTPEI---KCNVLKETTPKALWEKLESIYASKSLTNRLCLKMELYQLKMEIGEN 117

Query: 136 FTQHLNSFTELVNDLI 89
              H+N F +LV  L+
Sbjct: 118 LHDHINHFNQLVCQLL 133


>gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
          Length = 1029

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
 Frame = -1

Query: 475 SNLKMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDKKLIR 296
           S+ K E++K +G+ +F LW+ + R LL ++     L GK   P  +SD E   + KK   
Sbjct: 126 SSTKYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNLSDGEKDDLMKKA-- 183

Query: 295 Q*PSVS*IVCTPYYARE------NCLVLRTSWRLYL-KSTMNKLIVKTNLYRLRMKEDTT 137
              SV  +  +    RE         V      +Y+ KS  N+L +K  LY L+M E T+
Sbjct: 184 --HSVILLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTS 241

Query: 136 FTQHLNSFTELVNDL----IVLESRSKIGICYCYLFP 38
              H++ F  ++ DL    + +E      I  CYL P
Sbjct: 242 VNTHIDEFNRVILDLKNIDVKIEDEDLALILLCYLPP 278


>gb|ESQ46603.1| hypothetical protein EUTSA_v10000703mg, partial [Eutrema
           salsugineum]
          Length = 162

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 4/154 (2%)
 Frame = -1

Query: 487 MDGDSNLKMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDK 308
           M   ++LK ++ + +GKGNF LWQ + + LL ++     L    KKP+KI  ++   +  
Sbjct: 1   MTKGNSLKFDIPRFNGKGNFGLWQSRVKDLLTQQGMKKAL--LEKKPDKIKQDDWDDMQD 58

Query: 307 KLIRQ*PSVS*IVCTPYYARENCLVLRTSWRLYLKSTMNKLIVKTNLYRLRMKEDTTFTQ 128
           +           V T  +   + +  +       KS  +KL +K  L+ L+M E      
Sbjct: 59  Q----------AVSTIRFCLSDDITNQLEKMYMSKSLSSKLYLKQKLFGLKMVESGDLIA 108

Query: 127 HLNSFTELVNDL----IVLESRSKIGICYCYLFP 38
           H+N+F +++ DL    + +E   K  I  C L P
Sbjct: 109 HINNFNQIIGDLTRVDMKIEDEDKAMILLCSLPP 142


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 52.8 bits (125), Expect(2) = 5e-07
 Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
 Frame = -1

Query: 466 KMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDKKLIRQ*- 290
           K E++K +G+ NF LW+ + R +L K+     + G+   P  I+DE+  ++D   +    
Sbjct: 4   KFEIEKFNGR-NFSLWKLKIRAILRKDNCLDAIDGR---PADITDEKWKEMDDNAVANLH 59

Query: 289 ----PSVS*IVCTPYYARENCLVLRTSWRLY-LKSTMNKLIVKTNLYRLRMKEDTTFTQH 125
                SV   +     A+E   +  T  +LY +KS  N++ +K  LY LRM E T+ T H
Sbjct: 60  LAMADSVLSSIAEKKTAKE---IWDTLIKLYEVKSLHNRIFLKRRLYTLRMGESTSVTDH 116

Query: 124 LNSFTELVNDL 92
           +N+   L + L
Sbjct: 117 INTLNTLFSQL 127



 Score = 28.5 bits (62), Expect(2) = 5e-07
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -3

Query: 62  DMLLLSLPASYDYLVIVITN 3
           ++LL SLP SYD L+I ITN
Sbjct: 141 ELLLQSLPDSYDQLIINITN 160


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 52.8 bits (125), Expect(2) = 5e-07
 Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
 Frame = -1

Query: 466 KMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDKKLIRQ*- 290
           K E++K +G+ NF LW+ + R +L K+     + G+   P  I+DE+  ++D   +    
Sbjct: 4   KFEIEKFNGR-NFSLWKLKIRAILRKDNCLDAIDGR---PADITDEKWKEMDDNAVANLH 59

Query: 289 ----PSVS*IVCTPYYARENCLVLRTSWRLY-LKSTMNKLIVKTNLYRLRMKEDTTFTQH 125
                SV   +     A+E   +  T  +LY +KS  N++ +K  LY LRM E T+ T H
Sbjct: 60  LAMADSVLSSIAEKKTAKE---IWDTLIKLYEVKSLHNRIFLKRRLYTLRMGESTSVTDH 116

Query: 124 LNSFTELVNDL 92
           +N+   L + L
Sbjct: 117 INTLNTLFSQL 127



 Score = 28.5 bits (62), Expect(2) = 5e-07
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -3

Query: 62  DMLLLSLPASYDYLVIVITN 3
           ++LL SLP SYD L+I ITN
Sbjct: 141 ELLLQSLPDSYDQLIINITN 160


>gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]
          Length = 707

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
 Frame = -1

Query: 466 KMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDKKLIRQ*P 287
           K +++K DGK +F +W+ Q   +L +     VLSGK+ KP   ++E+  + D+K +    
Sbjct: 4   KFDIEKFDGKISFAIWRVQMLAVLTQNGLKKVLSGKSAKPATTTEEQWEETDEKAL---- 59

Query: 286 SVS*IVCTPYYARE--NCLVLRTSW----RLYL-KSTMNKLIVKTNLYRLRMKEDTTFTQ 128
           S   +  +    RE  N       W     LY+ KS  NKL +K  L+ LRM E T    
Sbjct: 60  STIQLCLSREVLREVINEKTAAGIWSKLESLYMTKSLANKLRLKERLFTLRMSEGTPIQS 119

Query: 127 HLNSFTELVNDL 92
           HL  F  ++ DL
Sbjct: 120 HLGEFNSIIIDL 131


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
 Frame = -1

Query: 466 KMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNKKPEKISDEE*TKIDKKLIRQ*P 287
           K E++K +G  NF LW+ + + +L K      L+   ++P +I+D++  ++D   I    
Sbjct: 4   KYEIEKFNGN-NFSLWKMKMKAVLRKNNC---LAAIGERPMEITDDKWNEVDSNAISDLH 59

Query: 286 SVS*IVCTPYYARENCL--VLRTSWRLY-LKSTMNKLIVKTNLYRLRMKEDTTFTQHLNS 116
                      A +N    +  T  +LY  KS  NK+ +K  LY LRM E T  T H+N+
Sbjct: 60  LALADGVLSSVAEKNTAKEIWDTLTKLYEAKSLHNKIFLKRKLYTLRMAESTMVTDHINT 119

Query: 115 FTELVNDLIVL 83
              L + L  L
Sbjct: 120 LKTLFSQLTTL 130



 Score = 27.7 bits (60), Expect(2) = 2e-06
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -3

Query: 62  DMLLLSLPASYDYLVIVITN 3
           ++LL SLP SYD L+I +TN
Sbjct: 141 ELLLQSLPDSYDQLIINLTN 160


>gb|POO02710.1| hypothetical protein TorRG33x02_016960, partial [Trema orientalis]
          Length = 152

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
 Frame = -1

Query: 469 LKMEVDKLDGKGNFLLWQWQTRHLLAKEETDIVLSGKNK-KPEKISDEE*TKIDKKLIRQ 293
           +K +V+K DG  NF LW  Q R LL +     +L G++K    KISDE+   +D++    
Sbjct: 8   IKADVEKFDGNINFGLWHVQVRDLLIQSGLHNILKGRDKFGKSKISDEDWKDLDER---- 63

Query: 292 *PSVS*IVCTPYYARENCLVLRTS---W----RLY-LKSTMNKLIVKTNLYRLRMKEDTT 137
             + +  +C       N L + T+   W    +LY  K   N++ +K   Y L M + TT
Sbjct: 64  -AASAIRMCLAKNILVNMLGISTAKDLWEKLRKLYRAKGVSNRVYLKKQFYTLHMSKGTT 122

Query: 136 FTQHLNSFTELVNDLIVLESR 74
            + HL+    +V+   +LE R
Sbjct: 123 ISDHLSILNSIVSGWRLLELR 143