BLASTX nr result

ID: Ophiopogon22_contig00035074 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00035074
         (437 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN03407.1| F-box protein [Glycine soja] >gi|947052715|gb|KRH...    52   4e-06

>gb|KHN03407.1| F-box protein [Glycine soja]
 gb|KRH02168.1| hypothetical protein GLYMA_17G021300 [Glycine max]
          Length = 90

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 30/84 (35%), Positives = 45/84 (53%)
 Frame = -3

Query: 336 RCQAEVRLPDDVLMEIFPQLPVKSLIRFSSVSKAWLPEETAIISHVWPLLLWSSQYELYL 157
           R Q  V LP D++++I  +LPVKSL+RF SV K+WL       S +    LW S ++L  
Sbjct: 14  RMQKTVILPQDLVIQILLRLPVKSLVRFKSVCKSWL-------SFISDSHLWLSHFKLAA 66

Query: 156 CPEERSRIYRHYDEFNAISEMLSL 85
            P ER   +        ++ M++L
Sbjct: 67  APTERLVFFESSTSKTHVTNMITL 90


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