BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00035027
         (565 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020252754.1| pentatricopeptide repeat-containing protein ...    99   2e-20
ref|XP_020103359.1| pentatricopeptide repeat-containing protein ...    67   1e-09
ref|XP_008775031.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_022732123.1| pentatricopeptide repeat-containing protein ...    58   2e-06

>ref|XP_020252754.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial [Asparagus officinalis]
 ref|XP_020252755.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial [Asparagus officinalis]
 ref|XP_020252756.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial [Asparagus officinalis]
 gb|ONK77107.1| uncharacterized protein A4U43_C02F3170 [Asparagus officinalis]
          Length = 824

 Score = 98.6 bits (244), Expect = 2e-20
 Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 4/129 (3%)
 Frame = +1

Query: 190 KRSPPPILQDQPQSIKSDALSLTRP--SKNENQSPNPELEKLITLFPAKSPIEDAHVIKF 363
           + S  P+ Q +P+  ++ A    RP  S + N     +   L  LF  K PI +  V +F
Sbjct: 5   RSSSSPLYQRRPRFAQNTA----RPGCSASSNAVSLDQFRNLTALFVKKPPIREHQVTQF 60

Query: 364 LLNNRRNPSTALRYYRLAAKDGFFSLDSFCILLHILINGGRLSWAWELVMNTISGDS--K 537
           LL+N+RNP TALRY++ A KDGFF+LD FCILLHILI  GRLS A EL+ +++  DS  +
Sbjct: 61  LLSNQRNPKTALRYFKSAVKDGFFALDPFCILLHILIRSGRLSSARELLKDSLLSDSSPE 120

Query: 538 GLDVFDRLM 564
             DV D+L+
Sbjct: 121 PSDVVDKLV 129


>ref|XP_020103359.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Ananas comosus]
 ref|XP_020103369.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Ananas comosus]
 ref|XP_020103378.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Ananas comosus]
 ref|XP_020103386.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Ananas comosus]
          Length = 831

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
 Frame = +1

Query: 187 PKRSP--PPILQDQPQSIKSDALSLTRPSKNENQSPNPELEKLITLFPAKSPIEDAHVIK 360
           PK  P  PP+L   P  ++S + S     K ++ SP   ++KL   F  K      H+I 
Sbjct: 8   PKLHPWRPPLLPI-PIFLRSFSNSDKNIPKPQSPSPLSPIQKLANAFSPKPIPNQEHLID 66

Query: 361 FLLNNRRNPSTALRYY-RLAAKDGFFSLDSFCILLHILINGGRLSWAWELVMNTISGDS 534
           FL+ N+RNP  ALRY+ R+  +     +D+ C+L+HIL   G +S + +L+   ISGDS
Sbjct: 67  FLIANQRNPQKALRYFDRIHLRCTLLQIDALCVLVHILARSGMVSRSQKLLHRAISGDS 125


>ref|XP_008775031.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial [Phoenix dactylifera]
 ref|XP_008775032.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial [Phoenix dactylifera]
          Length = 845

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
 Frame = +1

Query: 229 SIKSDALSLTRPSKNEN-QSPNPELEKLITLF-PAKSPIEDAHVIKFLLNNRRNPSTALR 402
           SI+    +  +P  N    + +P + +LI+ F P +S      V++FLL  +R P  AL+
Sbjct: 35  SIEEPTAAAEKPIPNNVVHAHSPPIRRLISAFDPERSMSTQERVVEFLLTYQRRPREALK 94

Query: 403 YYRLAAKDGF-FSLDSFCILLHILINGGRLSWAWELVMNTISGDS 534
           Y+      G    ++  CILLHIL+  G LS A EL+  +I GDS
Sbjct: 95  YFNWVQNQGGPMGVEPLCILLHILVRSGWLSSARELLKRSILGDS 139


>ref|XP_022732123.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Durio zibethinus]
          Length = 864

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
 Frame = +1

Query: 184 FPKRSPPPILQDQPQSIKSDALSLTRPSKNENQSPNP-----ELEKLITLFPAKSPIEDA 348
           FP+   P    + P+ I SD+     P  + N S NP         L +       + + 
Sbjct: 33  FPQNPNPNPNTNFPEKITSDSRF---PISDSNFSGNPIRPISSDSHLTSSLMQDRSLNET 89

Query: 349 HVIKFLLNNRRNPSTALRYYR-LAAKDGFF-SLDSFCILLHILINGGRLSWAWELVMNTI 522
           HVI  LL ++ +P +AL+Y+R +  K GF  S+D FC+LLHIL+   +     + ++N +
Sbjct: 90  HVINTLLRHKNDPKSALKYFRSVEKKPGFVQSIDVFCVLLHILVGSPQTYKQAQYLLNFL 149

Query: 523 SGDS 534
           SGDS
Sbjct: 150 SGDS 153