BLASTX nr result
ID: Ophiopogon22_contig00034900
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00034900
(947 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AQL03381.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 36 4e-07
gb|AQK93973.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 36 4e-07
gb|AQK78701.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 36 5e-07
gb|ONM06616.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 36 5e-07
gb|AQK86945.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 35 7e-07
gb|ONM06831.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 36 8e-07
gb|AQK43109.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 35 8e-07
gb|ONM20455.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 35 9e-07
gb|ONM52836.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 35 1e-06
gb|ONM32720.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 35 1e-06
gb|AQK67802.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 35 1e-06
gb|ONM40856.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 35 1e-06
gb|ONM28983.1| Cysteine-rich receptor-like protein kinase 26 [Ze... 35 1e-06
gb|ONM38170.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 34 2e-06
gb|AQK43188.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 35 2e-06
gb|AQL03708.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 34 2e-06
gb|ONL92524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 34 2e-06
gb|AQK49916.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 36 2e-06
gb|AQK43450.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 35 2e-06
gb|ONM32741.1| hypothetical protein ZEAMMB73_Zm00001d041257 [Zea... 35 2e-06
>gb|AQL03381.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 895
Score = 36.2 bits (82), Expect(3) = 4e-07
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W +TN M KM
Sbjct: 300 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDTNIMWRKM 352
Score = 33.9 bits (76), Expect(3) = 4e-07
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 247 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 286
Score = 32.7 bits (73), Expect(3) = 4e-07
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 175 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 226
>gb|AQK93973.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 619
Score = 36.2 bits (82), Expect(3) = 4e-07
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W +TN M KM
Sbjct: 308 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDTNIMWRKM 360
Score = 33.9 bits (76), Expect(3) = 4e-07
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 255 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 294
Score = 32.7 bits (73), Expect(3) = 4e-07
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 183 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 234
>gb|AQK78701.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 35.8 bits (81), Expect(3) = 5e-07
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK + +E W +TN M KM
Sbjct: 312 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERIIEEGPWAEEGDTNIMWRKM 364
Score = 33.9 bits (76), Expect(3) = 5e-07
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 259 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 298
Score = 32.7 bits (73), Expect(3) = 5e-07
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 187 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 238
>gb|ONM06616.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 35.8 bits (81), Expect(3) = 5e-07
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK + +E W +TN M KM
Sbjct: 312 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERIIEEGPWAEEGDTNIMWRKM 364
Score = 33.9 bits (76), Expect(3) = 5e-07
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 259 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 298
Score = 32.7 bits (73), Expect(3) = 5e-07
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 187 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 238
>gb|AQK86945.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 35.0 bits (79), Expect(3) = 7e-07
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W ++N M KM
Sbjct: 312 RFKIRLRRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDSNIMWRKM 364
Score = 33.9 bits (76), Expect(3) = 7e-07
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 259 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 298
Score = 32.7 bits (73), Expect(3) = 7e-07
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 187 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 238
>gb|ONM06831.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 986
Score = 36.2 bits (82), Expect(3) = 8e-07
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W +TN M KM
Sbjct: 282 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDTNIMWRKM 334
Score = 33.9 bits (76), Expect(3) = 8e-07
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 229 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 268
Score = 31.6 bits (70), Expect(3) = 8e-07
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 157 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTYSTSFEGVHGGFGFGTRNQEG 208
>gb|AQK43109.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 917
Score = 34.7 bits (78), Expect(3) = 8e-07
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W ++N M KM
Sbjct: 333 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDSNIMWRKM 385
Score = 33.9 bits (76), Expect(3) = 8e-07
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 280 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 319
Score = 33.1 bits (74), Expect(3) = 8e-07
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF---LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 209 EFWEGLEDMVSSVPVGEKLFIGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 259
>gb|ONM20455.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1584
Score = 34.7 bits (78), Expect(3) = 9e-07
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W ++N M KM
Sbjct: 1000 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDSNIMWRKM 1052
Score = 33.9 bits (76), Expect(3) = 9e-07
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 947 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 986
Score = 32.7 bits (73), Expect(3) = 9e-07
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 875 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 926
>gb|ONM52836.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 34.7 bits (78), Expect(3) = 1e-06
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W ++N M KM
Sbjct: 312 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDSNIMWRKM 364
Score = 33.9 bits (76), Expect(3) = 1e-06
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 259 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 298
Score = 32.7 bits (73), Expect(3) = 1e-06
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 187 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 238
>gb|ONM32720.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 34.7 bits (78), Expect(3) = 1e-06
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W ++N M KM
Sbjct: 312 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDSNIMWRKM 364
Score = 33.9 bits (76), Expect(3) = 1e-06
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 259 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 298
Score = 32.7 bits (73), Expect(3) = 1e-06
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 187 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 238
>gb|AQK67802.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 939
Score = 34.7 bits (78), Expect(3) = 1e-06
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W ++N M KM
Sbjct: 278 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDSNIMWRKM 330
Score = 33.9 bits (76), Expect(3) = 1e-06
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 225 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 264
Score = 32.7 bits (73), Expect(3) = 1e-06
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 153 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 204
>gb|ONM40856.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 822
Score = 34.7 bits (78), Expect(3) = 1e-06
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W ++N M KM
Sbjct: 238 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDSNIMWRKM 290
Score = 33.9 bits (76), Expect(3) = 1e-06
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 185 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 224
Score = 32.7 bits (73), Expect(3) = 1e-06
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 113 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 164
>gb|ONM28983.1| Cysteine-rich receptor-like protein kinase 26 [Zea mays]
Length = 528
Score = 34.7 bits (78), Expect(3) = 1e-06
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W ++N M KM
Sbjct: 256 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDSNIMWRKM 308
Score = 33.9 bits (76), Expect(3) = 1e-06
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 203 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 242
Score = 32.7 bits (73), Expect(3) = 1e-06
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 131 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 182
>gb|ONM38170.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1038
Score = 33.9 bits (76), Expect(3) = 2e-06
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 281 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 320
Score = 33.9 bits (76), Expect(3) = 2e-06
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W + N M KM
Sbjct: 334 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDINIMWRKM 386
Score = 32.7 bits (73), Expect(3) = 2e-06
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 209 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 260
>gb|AQK43188.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 34.7 bits (78), Expect(3) = 2e-06
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W ++N M KM
Sbjct: 312 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDSNIMWRKM 364
Score = 33.9 bits (76), Expect(3) = 2e-06
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 259 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 298
Score = 32.0 bits (71), Expect(3) = 2e-06
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 187 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTNFEGVHGGFGFGTRNQEG 238
>gb|AQL03708.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 33.9 bits (76), Expect(3) = 2e-06
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 259 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 298
Score = 33.9 bits (76), Expect(3) = 2e-06
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W + N M KM
Sbjct: 312 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDINIMWRKM 364
Score = 32.7 bits (73), Expect(3) = 2e-06
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 187 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 238
>gb|ONL92524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 33.9 bits (76), Expect(3) = 2e-06
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 259 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 298
Score = 33.9 bits (76), Expect(3) = 2e-06
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W + N M KM
Sbjct: 312 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDINIMWRKM 364
Score = 32.7 bits (73), Expect(3) = 2e-06
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 187 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 238
>gb|AQK49916.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 747
Score = 36.2 bits (82), Expect(3) = 2e-06
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W +TN M KM
Sbjct: 334 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDTNIMWRKM 386
Score = 32.3 bits (72), Expect(3) = 2e-06
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -2
Query: 268 LISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 286 LVTFSSGQHTSQIDFVLLRKEDRHACLDCKVISGE 320
Score = 32.0 bits (71), Expect(3) = 2e-06
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 209 EFWEGLEDMVSSVPVGEKLFIGGDLNDHVGTSSTSFEGVHGGFGFGTRNQEG 260
>gb|AQK43450.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 918
Score = 34.7 bits (78), Expect(3) = 2e-06
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V +E W ++N M KM
Sbjct: 334 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDSNIMWRKM 386
Score = 33.9 bits (76), Expect(3) = 2e-06
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 283 RETNILISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
+ T+ L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 281 KRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 320
Score = 31.6 bits (70), Expect(3) = 2e-06
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 209 EFWEGLEDMISSVPVGEKLFIGGDLNGHVGTSSISFEGVHGGFGFGTRNQEG 260
>gb|ONM32741.1| hypothetical protein ZEAMMB73_Zm00001d041257 [Zea mays]
Length = 532
Score = 35.4 bits (80), Expect(3) = 2e-06
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -1
Query: 158 RINVRIKTYKEVLDISTKWWNLKGDNLIHFK-NVYKESSWNIYYETNNMRNKM 3
R +R++ K TKWW LKGD FK V KE W + N M KM
Sbjct: 312 RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIKEGPWAGEGDANIMWRKM 364
Score = 32.7 bits (73), Expect(3) = 2e-06
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Frame = -3
Query: 474 ESWKNLE-----YRGGEKLF----LNWLVGKDGNCYERMHGGNGYGVKSEIG 346
E W+ LE GEKLF LN VG +E +HGG G+G +++ G
Sbjct: 187 EFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEG 238
Score = 32.0 bits (71), Expect(3) = 2e-06
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -2
Query: 268 LISFKSEPNNSQINFFLTRRIGQLAQKDCRVILGE 164
L++F S + SQI+F L R+ + A DC+VI GE
Sbjct: 264 LVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGE 298