BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00034853
         (436 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX94024.1| hypothetical chloroplast RF19 (chloroplast) [Loma...    38   7e-06

>gb|AEX94024.1| hypothetical chloroplast RF19 (chloroplast) [Lomandra longifolia]
          Length = 1763

 Score = 38.1 bits (87), Expect(3) = 7e-06
 Identities = 22/55 (40%), Positives = 26/55 (47%)
 Frame = +1

Query: 154 P*IR*RKGNHLAIYIDXXXXXXXXXXXXXXXXXXXXEEEKEVTLIHYSEQSDFVR 318
           P IR RKG  + IY D                    +EE+EV LI YS+QSDF R
Sbjct: 586 PEIRSRKGKRVVIYTDNDQNANSSTSNDNTSNTSTDDEEEEVALIRYSQQSDFRR 640



 Score = 36.2 bits (82), Expect(3) = 7e-06
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = +3

Query: 24  DLKTITKKSIGMKETSRRVFQLSFESIDHL 113
           DL TI KKSIGM+E S+RV + S++ ID L
Sbjct: 542 DLTTIKKKSIGMEEISKRVSRWSYKLIDDL 571



 Score = 21.9 bits (45), Expect(3) = 7e-06
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 309 FCSGIIKGSIHPQ*CKTI 362
           F  GIIKGSI  Q  KT+
Sbjct: 638 FRRGIIKGSIRAQRRKTV 655