BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00034663
         (652 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   138   5e-34
ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   137   2e-33
ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   137   2e-33
ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   126   1e-29
ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   125   3e-29
gb|PKA46324.1| DNA-directed RNA polymerase 2, chloroplastic/mito...   115   8e-26
gb|PKU80441.1| DNA-directed RNA polymerase 2, chloroplastic/mito...   112   6e-25
ref|XP_020694074.1| DNA-directed RNA polymerase 2, chloroplastic...   112   7e-25
ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   106   7e-23
ref|XP_023870355.1| DNA-directed RNA polymerase 2B, chloroplasti...    99   4e-20
ref|XP_009394557.1| PREDICTED: DNA-directed RNA polymerase 1B, m...    96   5e-19
ref|XP_010660553.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    96   5e-19
ref|XP_018816700.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    94   2e-18
ref|XP_018816699.1| PREDICTED: DNA-directed RNA polymerase 2B, c...    94   2e-18
ref|XP_020571301.1| LOW QUALITY PROTEIN: DNA-directed RNA polyme...    94   2e-18
ref|XP_018816698.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    94   2e-18
ref|XP_020250528.1| DNA-directed RNA polymerase 1B, mitochondria...    93   3e-18
ref|XP_018810867.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    92   5e-18
ref|XP_011010825.1| PREDICTED: DNA-directed RNA polymerase 2B, c...    91   2e-17
ref|XP_011010824.1| PREDICTED: DNA-directed RNA polymerase 2B, c...    91   2e-17

>ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Phoenix
           dactylifera]
          Length = 1036

 Score =  138 bits (348), Expect = 5e-34
 Identities = 92/229 (40%), Positives = 126/229 (55%), Gaps = 20/229 (8%)
 Frame = -3

Query: 629 FHPLNFPTPLTSQPLVTQQS-FHPKSLPSQNLNSKPQIMLRNLARRAPISTQNLIFSPHL 453
           F P++ P P  S P+  +   F PKS            M R +A+ A  S +NL F    
Sbjct: 9   FPPVDSPKPRPSPPIRKETDHFSPKS----------SNMWRIIAQTASNSLKNLRFFAGG 58

Query: 452 LLSSPRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFSELGMVQNRESLPLVIDSKYPIA 273
            LS+ RPISSFLGFS +   C +N + DL+ P    F ++G  +N E  P V  S   I 
Sbjct: 59  SLSALRPISSFLGFSQDSFLCEKNRIWDLRPPLSSRFCDIGSHRNGELWPSVGYSNCSIG 118

Query: 272 SPRASLIDSKGFATAADEIASTDVDEE----EEMQSLLGELS------------KGSEIS 141
                L +SKG+A  A+ + STD+DEE    EE+QSLL E+S            +  E  
Sbjct: 119 KLSGFLANSKGYANVAEAVVSTDLDEEASSIEEIQSLLEEMSRVEVAEDWKVSDRSQEFP 178

Query: 140 EQIRL---KKANQMGKGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMC 3
           ++ +L   KK + MG  KY +LR+RQ+K+ETEAWE+AAKEY+E L+DMC
Sbjct: 179 QKAQLEEPKKVSGMGAKKYAKLRQRQIKIETEAWEQAAKEYKELLQDMC 227


>ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial isoform X2 [Elaeis
           guineensis]
          Length = 1036

 Score =  137 bits (344), Expect = 2e-33
 Identities = 93/228 (40%), Positives = 125/228 (54%), Gaps = 19/228 (8%)
 Frame = -3

Query: 629 FHPLNFPTPLTSQPLVTQQSFHPKSLPSQNLNSKPQIMLRNLARRAPISTQNLIFSPHLL 450
           F P++ P P  S  +  +    P          K   M R  A+ A  S++NL FS    
Sbjct: 9   FPPVDSPKPRPSYQIPKETDHFPL---------KSSDMWRIFAQTASNSSKNLRFSAGRS 59

Query: 449 LSSPRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFSELGMVQNRESLPLVIDSKYPIAS 270
           LS+ RPISSFLGF+ +     +N +LDL+ P    F ++G   N E  P V  S  PI  
Sbjct: 60  LSALRPISSFLGFTQDSFLWEKNRILDLRPPFNSRFCDIGPHHNGELWPSVGYSNCPIGK 119

Query: 269 PRASLIDSKGFATAADEIASTDVDEE----EEMQSLLGELS--------KGSEISEQI-- 132
               L +S+GFA  A+ +ASTD+DEE    EE+QSLL E S        K S+ SE++  
Sbjct: 120 LSGFLANSRGFADVAEAVASTDLDEEASSIEEIQSLLEETSTVEVAEDWKLSDRSEKLPQ 179

Query: 131 -----RLKKANQMGKGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMC 3
                  KK + MG  KY +LR+RQ+K+ETEAWE+AAKEY+E L+DMC
Sbjct: 180 KAQREEPKKVSGMGAKKYAKLRQRQIKIETEAWEQAAKEYKELLQDMC 227


>ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial isoform X1 [Elaeis
           guineensis]
          Length = 1042

 Score =  137 bits (344), Expect = 2e-33
 Identities = 93/228 (40%), Positives = 125/228 (54%), Gaps = 19/228 (8%)
 Frame = -3

Query: 629 FHPLNFPTPLTSQPLVTQQSFHPKSLPSQNLNSKPQIMLRNLARRAPISTQNLIFSPHLL 450
           F P++ P P  S  +  +    P          K   M R  A+ A  S++NL FS    
Sbjct: 9   FPPVDSPKPRPSYQIPKETDHFPL---------KSSDMWRIFAQTASNSSKNLRFSAGRS 59

Query: 449 LSSPRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFSELGMVQNRESLPLVIDSKYPIAS 270
           LS+ RPISSFLGF+ +     +N +LDL+ P    F ++G   N E  P V  S  PI  
Sbjct: 60  LSALRPISSFLGFTQDSFLWEKNRILDLRPPFNSRFCDIGPHHNGELWPSVGYSNCPIGK 119

Query: 269 PRASLIDSKGFATAADEIASTDVDEE----EEMQSLLGELS--------KGSEISEQI-- 132
               L +S+GFA  A+ +ASTD+DEE    EE+QSLL E S        K S+ SE++  
Sbjct: 120 LSGFLANSRGFADVAEAVASTDLDEEASSIEEIQSLLEETSTVEVAEDWKLSDRSEKLPQ 179

Query: 131 -----RLKKANQMGKGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMC 3
                  KK + MG  KY +LR+RQ+K+ETEAWE+AAKEY+E L+DMC
Sbjct: 180 KAQREEPKKVSGMGAKKYAKLRQRQIKIETEAWEQAAKEYKELLQDMC 227


>ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like [Elaeis guineensis]
          Length = 1038

 Score =  126 bits (316), Expect = 1e-29
 Identities = 83/196 (42%), Positives = 118/196 (60%), Gaps = 21/196 (10%)
 Frame = -3

Query: 527 PQIMLRNLARRAPISTQNLIFS--PHLLLSSPRPISSFLGFSHNPLSCPQNAVLDLKAPR 354
           P+ M RNLA +A  S++ L F+  P  + + P  ISSF+G + + +SC ++ +LDL AP 
Sbjct: 35  PKEMWRNLATKASSSSRYLGFAGRPSSVPAIPS-ISSFIGSAQDSISCERSRILDLTAPF 93

Query: 353 IYGFSELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVDEE----EE 186
            +  S +G   N + LP +  S   I      L DS+ FA+ A+ +ASTDVDE+    EE
Sbjct: 94  SHRSSNMGFCHNGDLLPFIRRSNSSIWRISGHLGDSRFFASVAEAVASTDVDEDASSIEE 153

Query: 185 MQSLLGELSK-----GSEIS---EQIRLKKANQ-------MGKGKYRRLRRRQVKVETEA 51
           +Q +L E+SK     GS+I    E++R K   +       MG GKY  LRRRQ+++ETEA
Sbjct: 154 IQGMLEEMSKIDAREGSKIGGNLEEVRPKVPLEKPRMVPGMGSGKYAILRRRQIRIETEA 213

Query: 50  WEEAAKEYREFLKDMC 3
           WE+AAKEY+E L DMC
Sbjct: 214 WEQAAKEYKELLTDMC 229


>ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
           [Phoenix dactylifera]
          Length = 1038

 Score =  125 bits (313), Expect = 3e-29
 Identities = 82/196 (41%), Positives = 117/196 (59%), Gaps = 21/196 (10%)
 Frame = -3

Query: 527 PQIMLRNLARRAPISTQNLIFS--PHLLLSSPRPISSFLGFSHNPLSCPQNAVLDLKAPR 354
           P+ M RNLAR+A  S++ L F+  P  + + P  ISSFLG S + + C ++ +LDL  P 
Sbjct: 35  PKEMWRNLARKASSSSRYLDFAGRPSSVPAIPS-ISSFLGSSQDSICCERSRILDLGTPF 93

Query: 353 IYGFSELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVDEE----EE 186
            +  S  G+  N +S P +    + I      L DS+ FA+ A+ ++STDVDE+    EE
Sbjct: 94  SHRSSNTGVGHNGDSSPFIRCPNFSIGRISGRLGDSRFFASVAEAVSSTDVDEDTSSIEE 153

Query: 185 MQSLLGELSK-----GSEIS---EQIRLKK-------ANQMGKGKYRRLRRRQVKVETEA 51
           +Q +L E+SK     GS+I    E++R K+          MG GKY  LRRRQ+++ETEA
Sbjct: 154 IQGMLEEMSKIDVREGSKIGGNLEEVRPKQQLGQPRMVCGMGSGKYAILRRRQIRIETEA 213

Query: 50  WEEAAKEYREFLKDMC 3
           WE+AAKEY+E L DMC
Sbjct: 214 WEQAAKEYKELLTDMC 229


>gb|PKA46324.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
           [Apostasia shenzhenica]
          Length = 1037

 Score =  115 bits (287), Expect = 8e-26
 Identities = 71/183 (38%), Positives = 105/183 (57%)
 Frame = -3

Query: 551 PSQNLNSKPQIMLRNLARRAPISTQNLIFSPHLLLSSPRPISSFLGFSHNPLSCPQNAVL 372
           PS +  ++ + M  +LA +A  S++NL  S      SPR   SFLGF H+ + C + ++L
Sbjct: 51  PSFSSPARSKDMWLSLATQALYSSRNLRLSGRSAFCSPRVFFSFLGFPHSRIPCEKESIL 110

Query: 371 DLKAPRIYGFSELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVDEE 192
           +LK P    FSE+G   N  S PL     + +      +   +G ++ A EIASTDVDEE
Sbjct: 111 ELK-PLCLRFSEMGSRPNAASRPLSDYLSHSMIRSSGFISRYRGMSSVAAEIASTDVDEE 169

Query: 191 EEMQSLLGELSKGSEISEQIRLKKANQMGKGKYRRLRRRQVKVETEAWEEAAKEYREFLK 12
            E  +    +    + S++ R   +   G  K+ +LRRRQ+K+ETEAWE+AAKEY+E L+
Sbjct: 170 GEAITEWKSMETSQDNSQKQRPASS---GLRKFYKLRRRQIKLETEAWEQAAKEYKELLE 226

Query: 11  DMC 3
           DMC
Sbjct: 227 DMC 229


>gb|PKU80441.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
           [Dendrobium catenatum]
          Length = 698

 Score =  112 bits (280), Expect = 6e-25
 Identities = 71/156 (45%), Positives = 93/156 (59%)
 Frame = -3

Query: 470 IFSPHLLLSSPRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFSELGMVQNRESLPLVID 291
           + S +L+ SS R ISSF+G +  P  C + A+LDLK      FS L   +NR  L  + D
Sbjct: 11  LHSRNLIRSSYRCISSFIGLTREPYPCSKKAILDLK------FS-LSSQKNRFLLFALDD 63

Query: 290 SKYPIASPRASLIDSKGFATAADEIASTDVDEEEEMQSLLGELSKGSEISEQIRLKKANQ 111
            K PIA P   +   +G A+ A+E+ STDVDE+ E      EL       E  R K+A  
Sbjct: 64  LKCPIAKPPGFI---RGLASVAEEVVSTDVDEDVEA---CVELKTIESSEESARKKQAAL 117

Query: 110 MGKGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMC 3
           M   K+ RLRRRQ+K+ETEAWE+AAKEYRE L++MC
Sbjct: 118 MSARKFHRLRRRQIKLETEAWEQAAKEYRELLEEMC 153


>ref|XP_020694074.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like
           [Dendrobium catenatum]
          Length = 937

 Score =  112 bits (280), Expect = 7e-25
 Identities = 71/156 (45%), Positives = 93/156 (59%)
 Frame = -3

Query: 470 IFSPHLLLSSPRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFSELGMVQNRESLPLVID 291
           + S +L+ SS R ISSF+G +  P  C + A+LDLK      FS L   +NR  L  + D
Sbjct: 11  LHSRNLIRSSYRCISSFIGLTREPYPCSKKAILDLK------FS-LSSQKNRFLLFALDD 63

Query: 290 SKYPIASPRASLIDSKGFATAADEIASTDVDEEEEMQSLLGELSKGSEISEQIRLKKANQ 111
            K PIA P   +   +G A+ A+E+ STDVDE+ E      EL       E  R K+A  
Sbjct: 64  LKCPIAKPPGFI---RGLASVAEEVVSTDVDEDVEA---CVELKTIESSEESARKKQAAL 117

Query: 110 MGKGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMC 3
           M   K+ RLRRRQ+K+ETEAWE+AAKEYRE L++MC
Sbjct: 118 MSARKFHRLRRRQIKLETEAWEQAAKEYRELLEEMC 153


>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score =  106 bits (265), Expect = 7e-23
 Identities = 70/188 (37%), Positives = 104/188 (55%), Gaps = 16/188 (8%)
 Frame = -3

Query: 518 MLRNLARRAPISTQNLIFSPHLLLSSPRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFS 339
           M R++ARRA ++   L      +L +      F+GFS + +        +LK+   + FS
Sbjct: 40  MWRHIARRASLTKVRLSRDSSSILRT----FGFMGFSQDSILNDTTRPFELKSSMSFRFS 95

Query: 338 ELGMVQNRE--------SLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVDEE--- 192
           E   ++N E          P++   + PI+ PR S    KG+A+ A+ + S D +E+   
Sbjct: 96  ERSFLRNGELPSKEDELGRPILGCFRNPISPPRLSN-HPKGYASVAEAVCSMDAEEDLSA 154

Query: 191 -EEMQSLLGELSKGS----EISEQIRLKKANQMGKGKYRRLRRRQVKVETEAWEEAAKEY 27
            +E+Q LL E+ K      E+ +Q ++K    MG+GKY  LRRRQVK+ETEAWE+AAKEY
Sbjct: 155 IDEIQELLEEMGKEEKKELELRDQKQIKLVGGMGQGKYLLLRRRQVKIETEAWEQAAKEY 214

Query: 26  REFLKDMC 3
           RE L DMC
Sbjct: 215 RELLMDMC 222


>ref|XP_023870355.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           [Quercus suber]
 gb|POE88831.1| dna-directed rna polymerase 2b, chloroplastic/mitochondrial
           [Quercus suber]
          Length = 1027

 Score = 98.6 bits (244), Expect = 4e-20
 Identities = 81/201 (40%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
 Frame = -3

Query: 563 PKSLPSQNLNSKPQIMLRNLARRAPISTQNLIFSPHLLLSSPRPISSFLGFSHNPLSCPQ 384
           P S P QN +     M  N+A+RA I  QN      L   S R  +SFLG +H+P+  P+
Sbjct: 27  PTSFP-QNPSRISATMWSNIAKRA-IQFQNPRRFCLLNSQSLRRANSFLGLTHHPI-LPE 83

Query: 383 NAVLDLKAPRIYGFSELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIA--- 213
                 K    YGFSE+G  +N E L     +  P           KG+A+ A+  A   
Sbjct: 84  K----FKYRPSYGFSEMGFRRNGEILSHEEFTGRPSFGFNGFFCP-KGYASVAEAEAEAA 138

Query: 212 -STDVDEEE----EMQSLLGELSKGSEISEQIRLKKANQ------MGKGKYRRLRRRQVK 66
            STDV+E+     E+Q LL E++K  E   Q+  K+  +      MG+GKY+ LRRRQVK
Sbjct: 139 SSTDVEEDVLVGVEVQELLREMNK--EEKRQVEYKRRRRRTMMRGMGQGKYQMLRRRQVK 196

Query: 65  VETEAWEEAAKEYREFLKDMC 3
           +ETEAWE+AAKEY+E L DMC
Sbjct: 197 IETEAWEQAAKEYKELLMDMC 217


>ref|XP_009394557.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Musa
           acuminata subsp. malaccensis]
          Length = 994

 Score = 95.5 bits (236), Expect = 5e-19
 Identities = 69/189 (36%), Positives = 102/189 (53%), Gaps = 17/189 (8%)
 Frame = -3

Query: 518 MLRNLARRAPISTQNLIFSPHLLLSSPRPISS-FLGFSHNPLSCPQNAVLD-LKAPRIYG 345
           M RN+AR A  +++NL  S +    SP P ++ FL    + + C ++ +LD    P +  
Sbjct: 1   MWRNIARTASSASRNLRLSSNR--PSPLPATTGFLSCFQDSIWCEKSRILDPATPPLVTR 58

Query: 344 FSELGMVQNRESLPLVIDSKYPIASPRASLI-DSKGFATAADEIASTDVDEE----EEMQ 180
             + G  Q  ESLP  +     +    + +  +S+ FA+ A+ ++STD DE+    EEMQ
Sbjct: 59  LFDAGFWQKGESLPKTLGHVNSLIMEVSGVPRNSRSFASVAEAVSSTDADEDTSTIEEMQ 118

Query: 179 SLL---GELSKGSEISEQIRLKKANQ-------MGKGKYRRLRRRQVKVETEAWEEAAKE 30
            LL    E+S G E     +L++  Q       M   KY  LRRRQ+++ETEAWE AAKE
Sbjct: 119 RLLELSAEISGGKEDKRFNKLRRNQQFPKIKAGMSAEKYTMLRRRQIQIETEAWETAAKE 178

Query: 29  YREFLKDMC 3
           Y+E L DMC
Sbjct: 179 YKELLMDMC 187


>ref|XP_010660553.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Vitis vinifera]
 emb|CBI16911.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1035

 Score = 95.5 bits (236), Expect = 5e-19
 Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 31/207 (14%)
 Frame = -3

Query: 530 KPQIMLRNLARRA-PISTQNLIFSPHLLLSSPRPISSFLGFSHN-------------PLS 393
           KP +M RN+A+RA P + +  ++     LS      SFLGFS +             P S
Sbjct: 36  KPTVMWRNIAKRAIPRAPRKCVYLDSQPLSRRY---SFLGFSQDLIFPEIMKFGTFEPSS 92

Query: 392 CPQNAVLDLKAPRIYGFSELGMVQNRESLPLVIDSKYPIASPRASLIDS---------KG 240
           C  +   ++      GF  +G + +RE           +  P    + +         K 
Sbjct: 93  CSSSGFSEM------GFRRIGEISSREDA---------VGRPSFGCLRNQMGFSGFCPKS 137

Query: 239 FATAADEIASTDVDEE----EEMQSLLGELSKGSE----ISEQIRLKKANQMGKGKYRRL 84
           +A+ A+ ++STDV+E+    +E+Q LLGE+ K  +       + +LK    M +G+Y RL
Sbjct: 138 YASVAEAVSSTDVEEDVSASDEIQELLGEMKKEEKRQVNFKRREKLKMERGMEQGRYLRL 197

Query: 83  RRRQVKVETEAWEEAAKEYREFLKDMC 3
           RRRQVK+ETEAWE AAKEY+E L DMC
Sbjct: 198 RRRQVKIETEAWELAAKEYKELLMDMC 224


>ref|XP_018816700.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial isoform X3 [Juglans regia]
          Length = 891

 Score = 93.6 bits (231), Expect = 2e-18
 Identities = 70/184 (38%), Positives = 103/184 (55%), Gaps = 12/184 (6%)
 Frame = -3

Query: 518 MLRNLARRAPISTQNLIFSPHLLLSSPRPISSFLGFSHNPLSCPQNAVL--DLKAPRIYG 345
           M  N+A+RA   +Q+ + + H L    R + SFLG + +P+   +      +L A    G
Sbjct: 1   MWSNIAKRAISKSQSFVLNSHSL----RRVHSFLGRTQDPIFPEEFRYRPSELNACWDNG 56

Query: 344 FSELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADE--IASTDVDEE----EEM 183
           FSE+G  ++ E        + P  S   S    +G+A+ A+   ++STDV+E+    EE+
Sbjct: 57  FSEMGYHRHDEFFSHEDFMRRP--SFGISGFCPRGYASLAEAEVVSSTDVEEDVSVAEEV 114

Query: 182 QSLLGELSKGSEISEQIRLKK----ANQMGKGKYRRLRRRQVKVETEAWEEAAKEYREFL 15
           Q LL E+SK  +     R ++    A  MG+GKY  LRRRQVK+ETEAWE+AAKEY+E L
Sbjct: 115 QELLQEMSKEEKRQVDYRRRRQQKMARGMGQGKYHLLRRRQVKIETEAWEQAAKEYKELL 174

Query: 14  KDMC 3
             MC
Sbjct: 175 MVMC 178


>ref|XP_018816699.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial isoform X2 [Juglans regia]
          Length = 926

 Score = 93.6 bits (231), Expect = 2e-18
 Identities = 70/184 (38%), Positives = 103/184 (55%), Gaps = 12/184 (6%)
 Frame = -3

Query: 518 MLRNLARRAPISTQNLIFSPHLLLSSPRPISSFLGFSHNPLSCPQNAVL--DLKAPRIYG 345
           M  N+A+RA   +Q+ + + H L    R + SFLG + +P+   +      +L A    G
Sbjct: 1   MWSNIAKRAISKSQSFVLNSHSL----RRVHSFLGRTQDPIFPEEFRYRPSELNACWDNG 56

Query: 344 FSELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADE--IASTDVDEE----EEM 183
           FSE+G  ++ E        + P  S   S    +G+A+ A+   ++STDV+E+    EE+
Sbjct: 57  FSEMGYHRHDEFFSHEDFMRRP--SFGISGFCPRGYASLAEAEVVSSTDVEEDVSVAEEV 114

Query: 182 QSLLGELSKGSEISEQIRLKK----ANQMGKGKYRRLRRRQVKVETEAWEEAAKEYREFL 15
           Q LL E+SK  +     R ++    A  MG+GKY  LRRRQVK+ETEAWE+AAKEY+E L
Sbjct: 115 QELLQEMSKEEKRQVDYRRRRQQKMARGMGQGKYHLLRRRQVKIETEAWEQAAKEYKELL 174

Query: 14  KDMC 3
             MC
Sbjct: 175 MVMC 178


>ref|XP_020571301.1| LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Phalaenopsis equestris]
          Length = 968

 Score = 93.6 bits (231), Expect = 2e-18
 Identities = 63/154 (40%), Positives = 85/154 (55%)
 Frame = -3

Query: 464 SPHLLLSSPRPISSFLGFSHNPLSCPQNAVLDLKAPRIYGFSELGMVQNRESLPLVIDSK 285
           S +LL SS R ISSFLG + +     + ++LDLK+            Q   SL    D  
Sbjct: 13  SRNLLSSSSRCISSFLGVTRDSAPYIKKSILDLKSSI--------PCQRVNSLSFTFDDL 64

Query: 284 YPIASPRASLIDSKGFATAADEIASTDVDEEEEMQSLLGELSKGSEISEQIRLKKANQMG 105
               S     I  + FA+ A+E+ STDVDEE E    +  +    EI+   R K+A  + 
Sbjct: 65  KCPTSKLPCFI--RRFASVAEEVVSTDVDEEAEACVEVKTIESSEEIA---RKKQAALLS 119

Query: 104 KGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMC 3
             K+ RLRRRQ+K+ETEAWE+AAKEYRE L++MC
Sbjct: 120 ARKFHRLRRRQIKLETEAWEQAAKEYRELLEEMC 153


>ref|XP_018816698.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial isoform X1 [Juglans regia]
          Length = 999

 Score = 93.6 bits (231), Expect = 2e-18
 Identities = 70/184 (38%), Positives = 103/184 (55%), Gaps = 12/184 (6%)
 Frame = -3

Query: 518 MLRNLARRAPISTQNLIFSPHLLLSSPRPISSFLGFSHNPLSCPQNAVL--DLKAPRIYG 345
           M  N+A+RA   +Q+ + + H L    R + SFLG + +P+   +      +L A    G
Sbjct: 1   MWSNIAKRAISKSQSFVLNSHSL----RRVHSFLGRTQDPIFPEEFRYRPSELNACWDNG 56

Query: 344 FSELGMVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADE--IASTDVDEE----EEM 183
           FSE+G  ++ E        + P  S   S    +G+A+ A+   ++STDV+E+    EE+
Sbjct: 57  FSEMGYHRHDEFFSHEDFMRRP--SFGISGFCPRGYASLAEAEVVSSTDVEEDVSVAEEV 114

Query: 182 QSLLGELSKGSEISEQIRLKK----ANQMGKGKYRRLRRRQVKVETEAWEEAAKEYREFL 15
           Q LL E+SK  +     R ++    A  MG+GKY  LRRRQVK+ETEAWE+AAKEY+E L
Sbjct: 115 QELLQEMSKEEKRQVDYRRRRQQKMARGMGQGKYHLLRRRQVKIETEAWEQAAKEYKELL 174

Query: 14  KDMC 3
             MC
Sbjct: 175 MVMC 178


>ref|XP_020250528.1| DNA-directed RNA polymerase 1B, mitochondrial-like [Asparagus
           officinalis]
 gb|ONK55019.1| uncharacterized protein A4U43_UnF8500 [Asparagus officinalis]
          Length = 1023

 Score = 93.2 bits (230), Expect = 3e-18
 Identities = 81/219 (36%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
 Frame = -3

Query: 605 PLTSQPLVTQQSFHP-KSLPSQNLNSKPQIMLRNLARRAPISTQNLIFSPHLLLSSPRPI 429
           P    PL  Q   +P  S+ S N +     M R LAR  P ST+ L        SS   +
Sbjct: 10  PSQLNPLPIQPHPNPFNSISSPNPSQISAQMYRTLARTIPRSTKTLS-------SSIPQL 62

Query: 428 SSFLGFSHNPLSCPQNAVLDLKA-PRIYGFSELGMVQNRESLPLVIDSKYPIASPR--AS 258
           S+F+GF  NP S  +N +  L   P+   FS    +      PL  +        R  AS
Sbjct: 63  SNFMGFPQNPSSSHKNPIFTLIGNPQKVEFSTFDGILK----PLAREVPRFFTGTRSFAS 118

Query: 257 LIDSKGFATAADEIASTDVDEEEEMQSLLGELSK---------GSEISEQIRLKKANQ-- 111
           + +++    AA   +STD DE  E+Q +L ELSK          SE + + R  +  Q  
Sbjct: 119 VAEAEVEVEAA---SSTDADEAAEIQEILEELSKVQVSTSNNAASENTNRKRNFEKTQHR 175

Query: 110 ---MGKGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMC 3
              MG GKY  LRRRQ+K+ETEAWE+AAKEY+E L DMC
Sbjct: 176 PLGMGTGKYAILRRRQIKIETEAWEQAAKEYKELLADMC 214


>ref|XP_018810867.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like, partial [Juglans
           regia]
          Length = 810

 Score = 92.4 bits (228), Expect = 5e-18
 Identities = 70/188 (37%), Positives = 101/188 (53%), Gaps = 16/188 (8%)
 Frame = -3

Query: 518 MLRNLARRAPISTQNLIFSPHLLLSSPRPISSFLGFSHNPLSCPQNAVL--DLKAPRIYG 345
           M  N+A+RA    Q    + H L    R + SFLG + + +   +      +L A   YG
Sbjct: 1   MWSNIAKRAVSKPQGFGLNSHSL----RRVYSFLGLTQDRVFTEKFRFRPSELSACSDYG 56

Query: 344 FSELGMVQNRESLPLVIDSKYPIASPRASL--IDSKGFATAADEIA----STDVDEE--- 192
           F+E+G  +N E    V+  +  +  P   L     KG+A+ A+  A    STDV+E+   
Sbjct: 57  FTEMGYRRNGE----VLSHEDFMGGPSFGLRGFCPKGYASLAEAEAEALFSTDVEEDASV 112

Query: 191 -EEMQSLLGELSKGSEISEQIRLKKANQM----GKGKYRRLRRRQVKVETEAWEEAAKEY 27
            EE+Q LL E+SK  +     R ++  +M    G+GKY  +RRRQVK+ETEAWE+AA EY
Sbjct: 113 AEEIQELLQEMSKEEKRLVDYRRRRQQKMVRGMGQGKYHLIRRRQVKIETEAWEQAANEY 172

Query: 26  REFLKDMC 3
           +E L DMC
Sbjct: 173 KELLMDMC 180


>ref|XP_011010825.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like isoform X2 [Populus
           euphratica]
          Length = 1030

 Score = 90.9 bits (224), Expect = 2e-17
 Identities = 80/237 (33%), Positives = 117/237 (49%), Gaps = 25/237 (10%)
 Frame = -3

Query: 638 LNSFHPLNFPTPLTSQPLVTQQSFHPKSLPSQNLNSKPQ-IMLRNLARRAPISTQNLIFS 462
           ++S +P  F T     PL+   +F  K+     ++SKP  +M RN+A++A +  Q+   S
Sbjct: 1   MSSANPHIFSTKKID-PLI---AFDKKTSILSLISSKPSTVMWRNVAKQAILKPQSKSLS 56

Query: 461 PHLLLSSPRPISSFLGFSHNPL------------SCPQNAVLDLKAPRIY----GFSELG 330
                S PR   SFLG    P+            S PQ     +     Y    G    G
Sbjct: 57  ---FPSFPRT-HSFLGAPQEPIFFEKSKFHSVNNSSPQLGFRRISEISTYEDYMGKPSFG 112

Query: 329 MVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVDE----EEEMQSLLGEL 162
            ++N +S    + S +    PR       G+ + A+ ++STDV++    +EE+Q LL E 
Sbjct: 113 FLRNGDSSNGNLCSGF---CPR-------GYVSVAEAVSSTDVEDNVVVDEELQELLQET 162

Query: 161 SKGSEISEQIRLKKA----NQMGKGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMC 3
            K  E  +  R ++       MG GKY+ LRRRQVK+E EAWE+AAKEY+E LKDMC
Sbjct: 163 RKEEEKEKDFRRRRRLHSNRGMGSGKYKALRRRQVKIEAEAWEQAAKEYKELLKDMC 219


>ref|XP_011010824.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like isoform X1 [Populus
           euphratica]
          Length = 1043

 Score = 90.9 bits (224), Expect = 2e-17
 Identities = 80/237 (33%), Positives = 117/237 (49%), Gaps = 25/237 (10%)
 Frame = -3

Query: 638 LNSFHPLNFPTPLTSQPLVTQQSFHPKSLPSQNLNSKPQ-IMLRNLARRAPISTQNLIFS 462
           ++S +P  F T     PL+   +F  K+     ++SKP  +M RN+A++A +  Q+   S
Sbjct: 1   MSSANPHIFSTKKID-PLI---AFDKKTSILSLISSKPSTVMWRNVAKQAILKPQSKSLS 56

Query: 461 PHLLLSSPRPISSFLGFSHNPL------------SCPQNAVLDLKAPRIY----GFSELG 330
                S PR   SFLG    P+            S PQ     +     Y    G    G
Sbjct: 57  ---FPSFPRT-HSFLGAPQEPIFFEKSKFHSVNNSSPQLGFRRISEISTYEDYMGKPSFG 112

Query: 329 MVQNRESLPLVIDSKYPIASPRASLIDSKGFATAADEIASTDVDE----EEEMQSLLGEL 162
            ++N +S    + S +    PR       G+ + A+ ++STDV++    +EE+Q LL E 
Sbjct: 113 FLRNGDSSNGNLCSGF---CPR-------GYVSVAEAVSSTDVEDNVVVDEELQELLQET 162

Query: 161 SKGSEISEQIRLKKA----NQMGKGKYRRLRRRQVKVETEAWEEAAKEYREFLKDMC 3
            K  E  +  R ++       MG GKY+ LRRRQVK+E EAWE+AAKEY+E LKDMC
Sbjct: 163 RKEEEKEKDFRRRRRLHSNRGMGSGKYKALRRRQVKIEAEAWEQAAKEYKELLKDMC 219