BLASTX nr result

ID: Ophiopogon22_contig00033649 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00033649
         (376 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256439.1| protein THYLAKOID FORMATION1, chloroplastic ...    56   1e-06
ref|XP_008812650.1| PREDICTED: protein THYLAKOID FORMATION1, chl...    55   4e-06

>ref|XP_020256439.1| protein THYLAKOID FORMATION1, chloroplastic [Asparagus officinalis]
 gb|ONK74640.1| uncharacterized protein A4U43_C03F8570 [Asparagus officinalis]
          Length = 288

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = -2

Query: 354 QEKKKREERVETQKANEAITKCAGDFLYSR 265
           +EKKKREERV +QKANEA+TKC+GDFLYSR
Sbjct: 258 REKKKREERVGSQKANEAVTKCSGDFLYSR 287


>ref|XP_008812650.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Phoenix dactylifera]
          Length = 289

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -2

Query: 354 QEKKKREERVETQKANEAITKCAGDFLYSRQ 262
           +EKKKREERVE+QKANEAITKC GDF ++RQ
Sbjct: 259 REKKKREERVESQKANEAITKCMGDFHHARQ 289


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