BLASTX nr result
ID: Ophiopogon22_contig00033637
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00033637
(772 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020246572.1| pentatricopeptide repeat-containing protein ... 292 5e-92
ref|XP_008778849.1| PREDICTED: pentatricopeptide repeat-containi... 241 3e-72
ref|XP_008812209.1| PREDICTED: pentatricopeptide repeat-containi... 240 4e-72
ref|XP_010929894.1| PREDICTED: pentatricopeptide repeat-containi... 237 7e-71
gb|PKA66159.1| Pentatricopeptide repeat-containing protein [Apos... 234 2e-69
ref|XP_008804230.1| PREDICTED: pentatricopeptide repeat-containi... 233 3e-69
ref|XP_009415085.1| PREDICTED: pentatricopeptide repeat-containi... 232 5e-69
ref|XP_010911169.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 232 6e-69
ref|XP_020591587.1| pentatricopeptide repeat-containing protein ... 223 4e-65
ref|XP_020686486.1| pentatricopeptide repeat-containing protein ... 211 1e-60
gb|OAY69837.1| Pentatricopeptide repeat-containing protein, chlo... 210 2e-60
gb|OVA06586.1| Pentatricopeptide repeat [Macleaya cordata] 199 5e-56
ref|XP_023530746.1| pentatricopeptide repeat-containing protein ... 191 3e-53
ref|XP_022968869.1| pentatricopeptide repeat-containing protein ... 189 2e-52
ref|XP_021292375.1| pentatricopeptide repeat-containing protein ... 189 2e-52
ref|XP_022933685.1| pentatricopeptide repeat-containing protein ... 189 2e-52
ref|XP_010251049.1| PREDICTED: pentatricopeptide repeat-containi... 189 3e-52
ref|XP_017973868.1| PREDICTED: pentatricopeptide repeat-containi... 188 4e-52
ref|XP_018840083.1| PREDICTED: pentatricopeptide repeat-containi... 187 1e-51
ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containi... 185 3e-51
>ref|XP_020246572.1| pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Asparagus officinalis]
gb|ONK58743.1| uncharacterized protein A4U43_C09F16200 [Asparagus officinalis]
Length = 594
Score = 292 bits (747), Expect = 5e-92
Identities = 158/245 (64%), Positives = 182/245 (74%), Gaps = 8/245 (3%)
Frame = +3
Query: 60 SKPLSSSSLTNPDPN-PKSP-TQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTA 233
S SSS + DP+ K P TQESVVYVLKQLDKKPPKALEFF HVT+ H F PGPTA
Sbjct: 28 SSSSSSSYSYSSDPSISKGPVTQESVVYVLKQLDKKPPKALEFFKHVTSVHG-FKPGPTA 86
Query: 234 YNLILRILADHPDHLPDFWQLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFH 413
YNLILRIL HPDH DFW LLRSM S GHSLD GTYL LLSKFK+ KMP EVSAL+ F+
Sbjct: 87 YNLILRILGGHPDHSSDFWLLLRSMDSSGHSLDDGTYLNLLSKFKTQKMPAEVSALSHFY 146
Query: 414 SNSEKESADDATIQLVLKTL----RDSECWN-EEMAKKLEEI-GFSPSETTVAKVLRVVR 575
S K+SA DAT++ V K L CW+ EE+ K++ EI F S T VAKVLR VR
Sbjct: 147 SQKRKDSAADATVERVSKALLLTSSSEPCWDEEEVEKRVREIHDFHLSGTLVAKVLREVR 206
Query: 576 NTPLKGLGFFRWAVACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDID 755
N+PLK L FFRW+ + S DY+HGSVAYNAMARVLGR +SI +FW+L+EEM R+G MD+D
Sbjct: 207 NSPLKALAFFRWSASASSDYEHGSVAYNAMARVLGREESITEFWELIEEMTRKGVVMDVD 266
Query: 756 TYVKL 770
TYVK+
Sbjct: 267 TYVKM 271
>ref|XP_008778849.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Phoenix dactylifera]
Length = 603
Score = 241 bits (614), Expect = 3e-72
Identities = 130/239 (54%), Positives = 162/239 (67%), Gaps = 4/239 (1%)
Frame = +3
Query: 66 PLSSSSLTNPD---PNPKSP-TQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTA 233
P + S+ +PD P P SP TQES++ VLK+LDK PPKAL FFN +T+ F P
Sbjct: 47 PPNFSTAVSPDSDLPVPASPPTQESILRVLKKLDKSPPKALAFFNRITS-QCGFKPAHLT 105
Query: 234 YNLILRILADHPDHLPDFWQLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFH 413
YNL+L+IL H D + DFW L+S+ GH++D TY+TLL+ FK HKM E SALTQF+
Sbjct: 106 YNLVLQILC-HKDSMKDFWAFLKSVDDAGHTIDRRTYVTLLANFKKHKMAAESSALTQFY 164
Query: 414 SNSEKESADDATIQLVLKTLRDSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKG 593
S + ++A DA I K + S+ W+E + KKL+++ S SE VAKVLR++R P K
Sbjct: 165 SRAMAKAASDAAIDSAAKLILGSKEWSEAVEKKLQDLNLSLSEIVVAKVLRIMRRFPSKA 224
Query: 594 LGFFRWAVACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
L FFRWA YKHGSVAYNAMARVLGR DSI +FW LV EMK EG EMD+DTYVKL
Sbjct: 225 LAFFRWA-GQRPGYKHGSVAYNAMARVLGREDSIGEFWSLVREMKGEGHEMDVDTYVKL 282
Score = 61.2 bits (147), Expect = 5e-07
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Frame = +3
Query: 129 VVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQLLRSM 308
V VL+ + + P KAL FF + G AYN + R+L D + +FW L+R M
Sbjct: 210 VAKVLRIMRRFPSKALAFFRWA-GQRPGYKHGSVAYNAMARVLG-REDSIGEFWSLVREM 267
Query: 309 RSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSE-KESADDA------------- 446
+ GH +D TY+ L +F+ M E L + + K + D
Sbjct: 268 KGEGHEMDVDTYVKLSRRFQKTMMMREAVELYELMMDGPYKPAIQDCGVLLRRIARSGMP 327
Query: 447 TIQLVLKTLRDSECWNEEMAKKLEEIGFSPSETTV---AKVLRVVRNTPLKGLGFFRWAV 617
++LV + +R E ++K L + G S T++ A+ +++ L G
Sbjct: 328 DLELVFRVVRKYEAAGYSLSKVLYD-GIHRSLTSIGRFAEAEEILKRMKLAG-------- 378
Query: 618 ACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
Y+ S+ Y+ + L +V + + +++ M+ +G D+ T+ L
Sbjct: 379 -----YEPDSITYSHLVYGLCKVKRLNEACKVLDNMEADGCVPDLMTWTAL 424
>ref|XP_008812209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Phoenix dactylifera]
Length = 580
Score = 240 bits (612), Expect = 4e-72
Identities = 131/239 (54%), Positives = 162/239 (67%), Gaps = 4/239 (1%)
Frame = +3
Query: 66 PLSSSSLTNPD---PNPKSP-TQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTA 233
P + S+ +PD P P SP TQESV+ VLK+LDK PPKAL FFN +T+ F P
Sbjct: 24 PPNFSTAVSPDSDLPVPASPPTQESVLRVLKKLDKSPPKALAFFNRITS-QCGFKPAHLT 82
Query: 234 YNLILRILADHPDHLPDFWQLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFH 413
YNL+L+IL H D + DFW L+S+ GH++D TY+TLL+ FK HKM E SALTQF+
Sbjct: 83 YNLVLQILC-HKDSMKDFWAFLKSVDDAGHTIDRRTYVTLLANFKKHKMTAESSALTQFY 141
Query: 414 SNSEKESADDATIQLVLKTLRDSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKG 593
S + ++A DA I K + S+ W+E + KKL+++ S SE VAKVLR++R P K
Sbjct: 142 SRAMAKAACDAAIDSAAKLILGSKEWSEAVEKKLQDLNLSLSEIVVAKVLRIMRRFPSKA 201
Query: 594 LGFFRWAVACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
L FFRWA YKHGSVAYNAMARVLGR DSI +FW LV EMK EG EMD+DTYVKL
Sbjct: 202 LAFFRWA-GQRPGYKHGSVAYNAMARVLGREDSIGEFWSLVREMKGEGHEMDVDTYVKL 259
Score = 61.2 bits (147), Expect = 5e-07
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Frame = +3
Query: 129 VVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQLLRSM 308
V VL+ + + P KAL FF + G AYN + R+L D + +FW L+R M
Sbjct: 187 VAKVLRIMRRFPSKALAFFRWA-GQRPGYKHGSVAYNAMARVLG-REDSIGEFWSLVREM 244
Query: 309 RSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSE-KESADDA------------- 446
+ GH +D TY+ L +F+ M E L + + K + D
Sbjct: 245 KGEGHEMDVDTYVKLSRRFQKTMMMREAVELYELMMDGPYKPAIQDCGVLLRRIARSGMP 304
Query: 447 TIQLVLKTLRDSECWNEEMAKKLEEIGFSPSETTV---AKVLRVVRNTPLKGLGFFRWAV 617
++LV + +R E ++K L + G S T++ A+ +++ L G
Sbjct: 305 DLELVFRVVRKYEAAGYSLSKVLYD-GIHRSLTSIGRFAEAEEILKRMKLAG-------- 355
Query: 618 ACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
Y+ S+ Y+ + L +V + + +++ M+ +G D+ T+ L
Sbjct: 356 -----YEPDSITYSHLVYGLCKVKRLNEACKVLDNMEADGCVPDLMTWTAL 401
>ref|XP_010929894.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Elaeis guineensis]
Length = 584
Score = 237 bits (604), Expect = 7e-71
Identities = 128/239 (53%), Positives = 165/239 (69%), Gaps = 2/239 (0%)
Frame = +3
Query: 60 SKPLSSSSLTNPD-PNPKSP-TQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTA 233
++P S++ + D +P SP T+ES++YVLK+LDKKP KAL FFN +T+ + F P
Sbjct: 27 ARPFSTAISQDSDLSHPTSPPTEESILYVLKKLDKKPQKALSFFNCITSQYG-FKPAHPT 85
Query: 234 YNLILRILADHPDHLPDFWQLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFH 413
YNL+LRIL H D + DFW L+SM GH++D TY+TLL+ FK HKM E SALTQF+
Sbjct: 86 YNLMLRILG-HKDSVKDFWAFLKSMDHAGHTIDRSTYVTLLANFKKHKMAAESSALTQFY 144
Query: 414 SNSEKESADDATIQLVLKTLRDSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKG 593
S + ++A D I +K + D+E WNE KKL+++ S SE VAKVL+ +R+ P K
Sbjct: 145 SRTMAKAASDTAIDSAVKIILDAEEWNEAAEKKLQDLDLSLSEIMVAKVLQELRDCPSKV 204
Query: 594 LGFFRWAVACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
L FFRW V YKHGSVAYNAMARVLG+ D I +FW LV+EMK EG EMDIDTY+KL
Sbjct: 205 LAFFRW-VGQRPGYKHGSVAYNAMARVLGQGDFIGEFWSLVQEMKGEGHEMDIDTYIKL 262
Score = 65.1 bits (157), Expect = 3e-08
Identities = 56/214 (26%), Positives = 88/214 (41%)
Frame = +3
Query: 129 VVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQLLRSM 308
V VL++L P K L FF V + G AYN + R+L D + +FW L++ M
Sbjct: 190 VAKVLQELRDCPSKVLAFFRWV-GQRPGYKHGSVAYNAMARVLGQG-DFIGEFWSLVQEM 247
Query: 309 RSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEKESADDATIQLVLKTLRDSEC 488
+ GH +D TY+ L +F+ KM E L +F + + A
Sbjct: 248 KGEGHEMDIDTYIKLSRRFQKTKMMREAVELYEFMMDGPYKPA----------------- 290
Query: 489 WNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDYKHGSVAYNAMA 668
++ L +I S + V RVVR G Y V Y+ +
Sbjct: 291 -IQDCGMLLRQIALS-GMPDLELVFRVVRKYEAAG-------------YSLSKVVYDGIH 335
Query: 669 RVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
R L + + +++++MK G+E D TY +L
Sbjct: 336 RSLTSIGKFDEADEILKKMKLAGYEPDNITYSQL 369
>gb|PKA66159.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 613
Score = 234 bits (596), Expect = 2e-69
Identities = 125/247 (50%), Positives = 166/247 (67%), Gaps = 8/247 (3%)
Frame = +3
Query: 54 HLSKPLSSSSLTNPDPNP--------KSPTQESVVYVLKQLDKKPPKALEFFNHVTATHA 209
HL +SS+ T D + + TQ+S++YVLK+L K P KAL FFN T T
Sbjct: 53 HLFSSATSSTTTISDSSDHKDLNYIASTHTQDSLIYVLKKLSKMPQKALTFFNLAT-TQY 111
Query: 210 AFNPGPTAYNLILRILADHPDHLPDFWQLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTE 389
PGP AY+L+LRILA H DH+ DFW L SM+ +GH LD +Y +LS FK K+ E
Sbjct: 112 GLRPGPAAYDLMLRILA-HKDHMADFWAFLISMQKHGHVLDESSYSVVLSSFKQQKLAAE 170
Query: 390 VSALTQFHSNSEKESADDATIQLVLKTLRDSECWNEEMAKKLEEIGFSPSETTVAKVLRV 569
+ALT+F+S + +ES+ D ++ + L D+E WN+E+ KKLE++ S SE +VAK+L
Sbjct: 171 AAALTKFYSRAAEESSIDIAVKSAAEVLLDAEQWNKELEKKLEDLRLSLSEYSVAKILLE 230
Query: 570 VRNTPLKGLGFFRWAVACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMD 749
VRN P+K LGFFRWA A DY+HGSVAYNAM+RVL R +SI +FW ++EMK +G+ MD
Sbjct: 231 VRNFPIKALGFFRWA-AQMPDYEHGSVAYNAMSRVLVRQESIGEFWSFLKEMKEKGYNMD 289
Query: 750 IDTYVKL 770
IDTYVKL
Sbjct: 290 IDTYVKL 296
Score = 65.5 bits (158), Expect = 2e-08
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 9/229 (3%)
Frame = +3
Query: 111 SPTQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFW 290
S ++ SV +L ++ P KAL FF A + G AYN + R+L + + +FW
Sbjct: 218 SLSEYSVAKILLEVRNFPIKALGFFRWA-AQMPDYEHGSVAYNAMSRVLV-RQESIGEFW 275
Query: 291 QLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEKESA-DDATI---QL 458
L+ M+ G+++D TY+ L +F KM T+V L +F + A D + Q+
Sbjct: 276 SFLKEMKEKGYNMDIDTYVKLTRQFLKRKMMTDVVQLYEFMMDGPYMPAIQDCGMLLRQI 335
Query: 459 VLKTLRDSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVAC----- 623
L + D + + KK E G+S S+ + R L +G F AV
Sbjct: 336 SLSPIPDLDL-VYRVVKKYEAAGYSLSKVVYDGIHR-----SLTSIGKFEEAVQIMKKMR 389
Query: 624 SLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
++ ++ Y+ + L + + + ++EEM+ G E D+ T+ L
Sbjct: 390 ENGFEPDNITYSQLVHGLCKAKRLDEASKVLEEMEEGGCEPDLKTWTVL 438
>ref|XP_008804230.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Phoenix dactylifera]
Length = 579
Score = 233 bits (593), Expect = 3e-69
Identities = 125/239 (52%), Positives = 164/239 (68%), Gaps = 2/239 (0%)
Frame = +3
Query: 60 SKPLSSSSLTNPD-PNPKSP-TQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTA 233
++P S++ ++ D P P SP T+ES++YVLK+LDKKP KAL FFN VT+ + F P
Sbjct: 22 ARPFSTAVSSDSDLPLPTSPPTEESILYVLKKLDKKPQKALSFFNCVTSQYG-FKPAHPT 80
Query: 234 YNLILRILADHPDHLPDFWQLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFH 413
YNL+LRIL H D + DFW L++M GH++D TY+TLL+ FK HKM E SAL+QF+
Sbjct: 81 YNLMLRILG-HKDSVKDFWAFLKTMDHAGHTIDRSTYVTLLANFKQHKMAAESSALSQFY 139
Query: 414 SNSEKESADDATIQLVLKTLRDSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKG 593
+ + ++A D I +K + +E WNE KKL+++ S SE VAKVL+ +R+ P K
Sbjct: 140 AQTMAKAASDTAIDSAVKIILGAEEWNEVAEKKLQDLDLSLSEVVVAKVLQELRDCPSKA 199
Query: 594 LGFFRWAVACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
FFRW V YKHGS AYNAMARVLG+ DSI +FW LV+EMK EG EMDIDTY+KL
Sbjct: 200 RAFFRW-VGQRPRYKHGSAAYNAMARVLGQRDSIGEFWSLVQEMKGEGHEMDIDTYIKL 257
Score = 64.7 bits (156), Expect = 3e-08
Identities = 56/214 (26%), Positives = 88/214 (41%)
Frame = +3
Query: 129 VVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQLLRSM 308
V VL++L P KA FF V + G AYN + R+L D + +FW L++ M
Sbjct: 185 VAKVLQELRDCPSKARAFFRWV-GQRPRYKHGSAAYNAMARVLGQR-DSIGEFWSLVQEM 242
Query: 309 RSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEKESADDATIQLVLKTLRDSEC 488
+ GH +D TY+ L +F+ KM E L +F + + A
Sbjct: 243 KGEGHEMDIDTYIKLSRRFQKTKMMREAVELYEFMMDGPYKPA----------------- 285
Query: 489 WNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDYKHGSVAYNAMA 668
++ L +I S + V RVVR G Y V Y+ +
Sbjct: 286 -IQDCGMLLRQIALS-GTPDLELVFRVVRKYEAAG-------------YSLSKVVYDGIH 330
Query: 669 RVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
R L + + +++++MK G+E D TY +L
Sbjct: 331 RSLTSIGMFDEADEILKKMKLAGYEPDNITYSQL 364
>ref|XP_009415085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 597
Score = 232 bits (592), Expect = 5e-69
Identities = 122/219 (55%), Positives = 150/219 (68%)
Frame = +3
Query: 114 PTQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQ 293
P+QESV+YVLK+ DKKP +AL FF VTA F PGP AYNL+LRIL PDHL DFW
Sbjct: 63 PSQESVLYVLKKFDKKPQQALSFFRRVTA-RPGFAPGPPAYNLMLRILG-RPDHLTDFWA 120
Query: 294 LLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEKESADDATIQLVLKTL 473
LRSM GH++D GTYLTLLS FK HK+ E +AL QF+S + + + A + +T+
Sbjct: 121 FLRSMHEVGHNVDQGTYLTLLSDFKRHKLAAESAALAQFYSRTAQHATSAAAVSAAARTI 180
Query: 474 RDSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDYKHGSVA 653
DS+ WNE + KKLE +E VA VLR VR P + L FFRWA S Y HGSVA
Sbjct: 181 LDSDDWNEGVEKKLE---LPLTEVAVAGVLREVRARPAQALAFFRWAGGRS-GYDHGSVA 236
Query: 654 YNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
YNA+ARVL + DS+ FWDL++EMK +G EMDIDTY+K+
Sbjct: 237 YNALARVLAQEDSMGQFWDLIQEMKEKGHEMDIDTYIKV 275
Score = 59.3 bits (142), Expect = 2e-06
Identities = 54/219 (24%), Positives = 88/219 (40%), Gaps = 1/219 (0%)
Frame = +3
Query: 117 TQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQL 296
T+ +V VL+++ +P +AL FF + ++ G AYN + R+LA D + FW L
Sbjct: 199 TEVAVAGVLREVRARPAQALAFFRWAGG-RSGYDHGSVAYNALARVLAQE-DSMGQFWDL 256
Query: 297 LRSMRSYGHSLDHGTYLTLLSK-FKSHKMPTEVSALTQFHSNSEKESADDATIQLVLKTL 473
++ M+ GH +D TY+ + KS M V K + D + L L
Sbjct: 257 IQEMKEKGHEMDIDTYIKVSRHLLKSRMMKEAVELYELMMDGPYKPAIQDCGMLLRQIAL 316
Query: 474 RDSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDYKHGSVA 653
D+ + V RVVR G Y V
Sbjct: 317 YDA--------------------PDLDLVFRVVRKYEAAG-------------YSLSKVV 343
Query: 654 YNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
Y+ + R L + +++++M+ EG+E D TY +L
Sbjct: 344 YDGIHRSLTSNGKFDEAEEILKKMRLEGYEPDNITYSQL 382
>ref|XP_010911169.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g48250, chloroplastic-like, partial [Elaeis
guineensis]
Length = 585
Score = 232 bits (591), Expect = 6e-69
Identities = 125/225 (55%), Positives = 153/225 (68%), Gaps = 1/225 (0%)
Frame = +3
Query: 99 PNPKSP-TQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDH 275
P P SP TQESV+YVLK K PPKAL FFN +T+ F P AYNL+L+IL H D
Sbjct: 42 PIPTSPPTQESVLYVLKMFVKSPPKALAFFNCITS-QCGFKPAHPAYNLMLQILG-HKDS 99
Query: 276 LPDFWQLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEKESADDATIQ 455
+ DFW L+SM GH++D TY+TLL+ FK HKM E SALTQF+S + ++A ++ I
Sbjct: 100 MKDFWAFLKSMDDAGHTIDRPTYVTLLANFKKHKMAAESSALTQFYSRTMAKAASNSAID 159
Query: 456 LVLKTLRDSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDY 635
K + SE W+E KKL+++ S SE VAKVLR +R+ P K FFRWA A Y
Sbjct: 160 SAAKIILGSEEWSEAAEKKLQDLNLSLSEIVVAKVLREMRHCPSKARAFFRWA-AQRPGY 218
Query: 636 KHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
KHGSVAYNAMAR+LGR DSI +FW LV EMK EG +MD+DTYVKL
Sbjct: 219 KHGSVAYNAMARILGREDSIGEFWSLVREMKGEGHDMDVDTYVKL 263
Score = 62.4 bits (150), Expect = 2e-07
Identities = 56/214 (26%), Positives = 86/214 (40%)
Frame = +3
Query: 129 VVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQLLRSM 308
V VL+++ P KA FF A + G AYN + RIL D + +FW L+R M
Sbjct: 191 VAKVLREMRHCPSKARAFFRWA-AQRPGYKHGSVAYNAMARILG-REDSIGEFWSLVREM 248
Query: 309 RSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEKESADDATIQLVLKTLRDSEC 488
+ GH +D TY+ L +F+ +M EV L + + + A
Sbjct: 249 KGEGHDMDVDTYVKLSRRFQKTEMMREVVGLYELMMDGPYKPA----------------- 291
Query: 489 WNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDYKHGSVAYNAMA 668
++ L I +S + V RVVR G Y V Y+ +
Sbjct: 292 -IQDCGMLLXRIAWS-GMPDLELVFRVVRKYEAAG-------------YSLSKVVYDGIH 336
Query: 669 RVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
R L + + +++ MK G+E D TY +L
Sbjct: 337 RSLTSIGRFDEAEEILNRMKLAGYEPDNITYSQL 370
>ref|XP_020591587.1| pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Phalaenopsis equestris]
Length = 616
Score = 223 bits (567), Expect = 4e-65
Identities = 119/230 (51%), Positives = 158/230 (68%), Gaps = 5/230 (2%)
Frame = +3
Query: 96 DPNPKS-----PTQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILA 260
DPN S PTQES++YVLK+LDK P KAL+FFN TA + PGP+AYNL+LRILA
Sbjct: 71 DPNEFSSLSSAPTQESMIYVLKKLDKMPQKALKFFNFATAQYGLV-PGPSAYNLMLRILA 129
Query: 261 DHPDHLPDFWQLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEKESAD 440
H D++ DFW L SM+ H LD GT+ +L FK K+ E ALTQF+ + ++S+
Sbjct: 130 -HKDYITDFWAFLNSMQDNDHQLDEGTFHVILGYFKKQKLVAESFALTQFYRRASEKSST 188
Query: 441 DATIQLVLKTLRDSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVA 620
DA ++ K + D+E W++++ KK+E++ S SE VAK+LR +RN P K LGFF WA
Sbjct: 189 DAAVKSAAKIVMDAEGWSKDVEKKVEDLKLSFSEELVAKILRELRNFPHKALGFFTWASG 248
Query: 621 CSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
+YKHGSVAYNAMARVLGR +S+ +FW LV+ M+ +MDIDTYVK+
Sbjct: 249 IP-NYKHGSVAYNAMARVLGRSESVGEFWSLVKGMEN---DMDIDTYVKV 294
>ref|XP_020686486.1| pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Dendrobium catenatum]
gb|PKU68233.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 622
Score = 211 bits (536), Expect = 1e-60
Identities = 113/232 (48%), Positives = 158/232 (68%)
Frame = +3
Query: 75 SSSLTNPDPNPKSPTQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRI 254
SS L PT ES++YV+K+LDK P KAL+FFN A H A PGP+AYNL+LRI
Sbjct: 75 SSDLNEFSSLTSVPTPESIIYVIKKLDKVPQKALDFFNFAKA-HYALVPGPSAYNLMLRI 133
Query: 255 LADHPDHLPDFWQLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEKES 434
LA H D + DFW LL SM+ G+ LD G Y +L FK+ K+ + S+LT+F+ +++++S
Sbjct: 134 LA-HKDFISDFWVLLNSMQKNGYKLDEGAYRVILGCFKNQKLIADSSSLTKFYYSAKEKS 192
Query: 435 ADDATIQLVLKTLRDSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWA 614
+ DA ++ K + D++ W++E+ K LE++ S SE VA +LR +R+ P K L FF WA
Sbjct: 193 STDAAVKYAAKIVLDAQDWSKEVEKNLEDLKSSVSEELVAMILRELRDYPHKALVFFAWA 252
Query: 615 VACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
DY+HGSVA+NAMA VLGR +SI +FW LV+EM+ ++MDIDTYVK+
Sbjct: 253 SGIP-DYQHGSVAHNAMALVLGRDESIGEFWSLVKEMR---YDMDIDTYVKV 300
>gb|OAY69837.1| Pentatricopeptide repeat-containing protein, chloroplastic [Ananas
comosus]
Length = 614
Score = 210 bits (534), Expect = 2e-60
Identities = 121/246 (49%), Positives = 151/246 (61%), Gaps = 11/246 (4%)
Frame = +3
Query: 66 PLSSSSLTNPDPNPKSPT----QESVVYVLKQLDKKPPKALEFFNHVTAT-HAAFNPGPT 230
P SSL++P P PT QES++Y L +L K P AL F V + ++F P
Sbjct: 49 PPPFSSLSSPPPRSPPPTTPLTQESLLYALTKLSKSPHHALSLFRRVASDPSSSFVPAAP 108
Query: 231 AYNLILRILADHPDHLPDFWQLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQF 410
A+NL+LRILA PD LP FW L SM GHSLDHGT+L+LL+ FK +P++ SAL QF
Sbjct: 109 AHNLMLRILA-RPDSLPQFWSFLSSMSRSGHSLDHGTFLSLLASFKRANLPSDRSALAQF 167
Query: 411 HSNSEKESADDATIQLVLKTLR------DSECWNEEMAKKLEEIGFSPSETTVAKVLRVV 572
+S S SA DA ++ L L + WN+ + L + SE VAKVLR +
Sbjct: 168 YSRSALLSASDAALRSTLHLLSSPSDPPSDDHWNDAVESNLNALNPQLSEDFVAKVLREL 227
Query: 573 RNTPLKGLGFFRWAVACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDI 752
RN PL LGFFRWA Y HG+VAYNAMAR LGR +SI+ FW L+EEMK+E +MDI
Sbjct: 228 RNRPLTALGFFRWA-GTRPGYAHGTVAYNAMARALGRGESIEQFWSLIEEMKQESRDMDI 286
Query: 753 DTYVKL 770
DTYVKL
Sbjct: 287 DTYVKL 292
>gb|OVA06586.1| Pentatricopeptide repeat [Macleaya cordata]
Length = 632
Score = 199 bits (505), Expect = 5e-56
Identities = 104/218 (47%), Positives = 147/218 (67%)
Frame = +3
Query: 117 TQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQL 296
T E+V+YVLK+LD+ P KAL FFN V+ + F T Y+L+LR+L + + +FW L
Sbjct: 96 THETVLYVLKKLDRNPEKALNFFNWVSDKNG-FKASSTVYSLMLRVLG-RKETMKEFWIL 153
Query: 297 LRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEKESADDATIQLVLKTLR 476
++ M G+ +D GTY TLL F KM ++ ALT+F S KE A DA ++ V++ ++
Sbjct: 154 VKKMSDEGYDMDEGTYNTLLGNFGKAKMTSDAVALTEFFSKMVKEGATDAIVKSVVEVIQ 213
Query: 477 DSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDYKHGSVAY 656
+S+ WN+E+ KKLE++ S SE T+ ++LR +R PLK L FF WA A +YKH +V Y
Sbjct: 214 ESD-WNDEVKKKLEDLKISLSENTLLRILRQLRAYPLKALRFFCWA-ADHHNYKHNAVTY 271
Query: 657 NAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
NA+ RVLGR +S+ FWD+V+EMK G EMDIDTY+KL
Sbjct: 272 NAIVRVLGREESVDKFWDMVKEMKSSGHEMDIDTYIKL 309
Score = 73.2 bits (178), Expect = 5e-11
Identities = 41/117 (35%), Positives = 67/117 (57%)
Frame = +3
Query: 411 HSNSEKESADDATIQLVLKTLRDSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLK 590
H S ++ ++LVL + W+EE+ ++L++ + + TV VL+ + P K
Sbjct: 59 HQKQFFSSKPNSLVELVL-----NNDWSEEVEQELQKSHPTQTHETVLYVLKKLDRNPEK 113
Query: 591 GLGFFRWAVACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTY 761
L FF W V+ +K S Y+ M RVLGR +++K+FW LV++M EG++MD TY
Sbjct: 114 ALNFFNW-VSDKNGFKASSTVYSLMLRVLGRKETMKEFWILVKKMSDEGYDMDEGTY 169
Score = 64.7 bits (156), Expect = 4e-08
Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 12/232 (5%)
Frame = +3
Query: 111 SPTQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFW 290
S ++ +++ +L+QL P KAL FF A H + YN I+R+L + + FW
Sbjct: 231 SLSENTLLRILRQLRAYPLKALRFFCWA-ADHHNYKHNAVTYNAIVRVLG-REESVDKFW 288
Query: 291 QLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSE-KESADDATIQLVLK 467
+++ M+S GH +D TY+ L +F+ KM + L +F + K D + L
Sbjct: 289 DMVKEMKSSGHEMDIDTYIKLARQFQRSKMMKDAVELYEFMMDGPYKPPIHDCSTLL--- 345
Query: 468 TLRDSECWNEEMA------KKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWA----- 614
+ S C N +++ KK E G S S+ + R L +G F A
Sbjct: 346 -RQISLCANPDLSLVFRVVKKYEATGHSLSKAVYDGIHR-----SLTSVGKFDEADKILE 399
Query: 615 VACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
+ Y+ ++ Y+ + L + +++ V++M+++G D+ T+ L
Sbjct: 400 TMKNAGYEPDNITYSQVVFGLCKAGRLEEACKTVDDMEKQGCTPDLKTWTIL 451
>ref|XP_023530746.1| pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Cucurbita pepo subsp. pepo]
Length = 637
Score = 191 bits (486), Expect = 3e-53
Identities = 102/218 (46%), Positives = 142/218 (65%)
Frame = +3
Query: 117 TQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQL 296
T E++VYVLK+LDK+P KA +FFN + + P Y+++LRI + + + FW
Sbjct: 85 THETMVYVLKRLDKEPQKASDFFNWACGKNGSTQSSPI-YSILLRIFVQN-ESMKQFWIT 142
Query: 297 LRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEKESADDATIQLVLKTLR 476
LR M+ G LD TYLT+L K K + +ALT F++ +E+A D+ +Q V+ +
Sbjct: 143 LRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHFYNRMLQENAMDSVVQKVVNIVL 202
Query: 477 DSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDYKHGSVAY 656
SE WN ++A+KLE +G S++ V +VL+ +RN PLKGL FF W V C DY H +V Y
Sbjct: 203 QSE-WNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKGLSFFHW-VGCRPDYDHNTVTY 260
Query: 657 NAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
NA+ARVLGR DSI+ FW LVEEMK G E+DIDTY+K+
Sbjct: 261 NAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKI 298
Score = 65.1 bits (157), Expect = 3e-08
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Frame = +3
Query: 129 VVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQLLRSM 308
V+ VLK+L P K L FF H ++ YN I R+L D + FW L+ M
Sbjct: 226 VIRVLKELRNFPLKGLSFF-HWVGCRPDYDHNTVTYNAIARVLG-RDDSIEAFWGLVEEM 283
Query: 309 RSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSE-KESADDATIQLVLKTLRDSE 485
++ GH +D TY+ + +F+ KM + L + + K S D ++ L + D+
Sbjct: 284 KNAGHEIDIDTYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNP 343
Query: 486 CWN--EEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVAC-----SLDYKHG 644
+ +AKK E G+S S+ + R L G F A + Y+
Sbjct: 344 DLSLVFRVAKKFEATGYSLSKAVYDGIHR-----SLTSAGKFDEAENIVKSMRNAGYEPD 398
Query: 645 SVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
+V Y+ + L + +++ ++++EM+ +G DI T+ L
Sbjct: 399 NVTYSQLVFGLCKARRLEEACEVLDEMEAQGCVPDIKTWTIL 440
>ref|XP_022968869.1| pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Cucurbita maxima]
Length = 636
Score = 189 bits (481), Expect = 2e-52
Identities = 101/218 (46%), Positives = 141/218 (64%)
Frame = +3
Query: 117 TQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQL 296
T E++VYVLK+LDK+P KA +FFN + + P Y+++LRI + + + FW
Sbjct: 85 THETMVYVLKRLDKEPQKASDFFNWACGKNGSTQSSPI-YSILLRIFVQN-ESMKQFWIT 142
Query: 297 LRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEKESADDATIQLVLKTLR 476
LR M+ G LD TYLT+L K K + +ALT F++ +E+A D+ +Q V+ +
Sbjct: 143 LRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHFYNRMLQENAMDSVVQKVVNIVL 202
Query: 477 DSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDYKHGSVAY 656
SE WN ++A+KLE +G S++ V + L+ +RN PLKGL FF W V C DY H +V Y
Sbjct: 203 RSE-WNNDVAEKLEGLGIVLSDSFVIRALKELRNFPLKGLSFFHW-VGCRSDYDHNTVTY 260
Query: 657 NAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
NA+ARVLGR DSI+ FW LVEEMK G E+DIDTY+K+
Sbjct: 261 NAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKI 298
Score = 64.3 bits (155), Expect = 5e-08
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 8/222 (3%)
Frame = +3
Query: 129 VVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQLLRSM 308
V+ LK+L P K L FF H + ++ YN I R+L D + FW L+ M
Sbjct: 226 VIRALKELRNFPLKGLSFF-HWVGCRSDYDHNTVTYNAIARVLG-RDDSIEAFWGLVEEM 283
Query: 309 RSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSE-KESADDATIQLVLKTLRDSE 485
++ GH +D TY+ + +F+ KM + L + + K S D ++ L + D+
Sbjct: 284 KNAGHEIDIDTYIKISRQFQRTKMIGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNP 343
Query: 486 CWN--EEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWA--VACSL---DYKHG 644
+ +AKK E G+S S+ + R L G F A + SL Y+
Sbjct: 344 DLSLVFRVAKKFEATGYSLSKAVYDGIHR-----SLTSAGKFDEAENIVKSLRNAGYEPD 398
Query: 645 SVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
+V Y+ + L + +++ ++++EM+ +G DI T+ L
Sbjct: 399 NVTYSQLVFGLCKARRLEEACEVLDEMEAQGCVPDIKTWTIL 440
>ref|XP_021292375.1| pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Herrania umbratica]
Length = 631
Score = 189 bits (480), Expect = 2e-52
Identities = 101/218 (46%), Positives = 140/218 (64%)
Frame = +3
Query: 117 TQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQL 296
T E+V+YVLK+LDK P KA FFN + FNP Y+ +LRILA D + +FW
Sbjct: 100 THETVIYVLKKLDKDPKKASNFFNWAREENG-FNPNSCVYSFMLRILASK-DTMKEFWIT 157
Query: 297 LRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEKESADDATIQLVLKTLR 476
LR M+ G LD TY T+ S FK +KM T+V ALT F+ +E+A D+ ++ V +
Sbjct: 158 LREMKDQGFYLDEETYYTIHSLFKKNKMNTDVVALTHFYKRMVEENAKDSIVKEVADVVL 217
Query: 477 DSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDYKHGSVAY 656
+E W+ E+ K+L+++ S+ V +VL+ +R+ P KGL FF WA CS YKH +V Y
Sbjct: 218 GNE-WSNEIEKQLDDMAIVLSDNLVIRVLKELRSYPRKGLKFFHWAGKCS-SYKHNTVTY 275
Query: 657 NAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
NA+ RVL R DS +FW +V+E+K EGFEMDIDTY+K+
Sbjct: 276 NALLRVLARHDSTGEFWSVVDELKGEGFEMDIDTYIKV 313
Score = 65.9 bits (159), Expect = 1e-08
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Frame = +3
Query: 339 TYLTLLSKFKSH-KMPTEVSALTQFHSNSEKESADDATIQLVLKTLRDSECWNEEMAKKL 515
T +T S+F SH S L S + +QL++ + W++E+ +L
Sbjct: 38 TQVTHFSRFSSHLSSQPHSSHLLSSRQKLHFSSKPSSLVQLIV-----TNDWSDELETEL 92
Query: 516 EEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDYKHGSVAYNAMARVLGRVDSI 695
E+ + + TV VL+ + P K FF WA + S Y+ M R+L D++
Sbjct: 93 EKFKSALTHETVIYVLKKLDKDPKKASNFFNWARE-ENGFNPNSCVYSFMLRILASKDTM 151
Query: 696 KDFWDLVEEMKREGFEMDIDTY 761
K+FW + EMK +GF +D +TY
Sbjct: 152 KEFWITLREMKDQGFYLDEETY 173
>ref|XP_022933685.1| pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Cucurbita moschata]
Length = 634
Score = 189 bits (480), Expect = 2e-52
Identities = 101/218 (46%), Positives = 143/218 (65%)
Frame = +3
Query: 117 TQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQL 296
T E++VYVLK+LDK+P KA +FF+ + + P Y+++LRI+ + + + FW
Sbjct: 85 THETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSSPI-YSILLRIVVQN-ESMKQFWIT 142
Query: 297 LRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEKESADDATIQLVLKTLR 476
LR M+ G LD TYLT+L K K + +ALT F++ +E+A D+ +Q V+ +
Sbjct: 143 LRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHFYNRMLQENAMDSVVQKVVNIVL 202
Query: 477 DSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDYKHGSVAY 656
SE WN ++A+KLE +G S++ V +VL+ +RN PLKGL FF W V C DY H +V Y
Sbjct: 203 RSE-WNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKGLSFFHW-VGCRPDYDHNTVTY 260
Query: 657 NAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
NA+ARVLGR DSI+ FW LVEEMK G E+DIDTY+K+
Sbjct: 261 NAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKI 298
Score = 65.1 bits (157), Expect = 3e-08
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Frame = +3
Query: 129 VVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQLLRSM 308
V+ VLK+L P K L FF H ++ YN I R+L D + FW L+ M
Sbjct: 226 VIRVLKELRNFPLKGLSFF-HWVGCRPDYDHNTVTYNAIARVLG-RDDSIEAFWGLVEEM 283
Query: 309 RSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSE-KESADDATIQLVLKTLRDSE 485
++ GH +D TY+ + +F+ KM + L + + K S D ++ L + D+
Sbjct: 284 KNAGHEIDIDTYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNP 343
Query: 486 CWN--EEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVAC-----SLDYKHG 644
+ +AKK E G+S S+ + R L G F A + Y+
Sbjct: 344 DLSLVFRVAKKFEATGYSLSKAVYDGIHR-----SLTSAGKFDEAENIVKSMRNAGYEPD 398
Query: 645 SVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
+V Y+ + L + +++ ++++EM+ +G DI T+ L
Sbjct: 399 NVTYSQLVFGLCKARRLEEACEVLDEMEAQGCVPDIKTWTIL 440
>ref|XP_010251049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Nelumbo nucifera]
Length = 631
Score = 189 bits (479), Expect = 3e-52
Identities = 102/239 (42%), Positives = 151/239 (63%), Gaps = 1/239 (0%)
Frame = +3
Query: 57 LSKPLSSSSLTNPDPNPKSPTQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAY 236
+ K L S+LT PT E+V+Y+LK+LDK+P KA FFN V+ F P + Y
Sbjct: 81 IEKELEGSNLT--------PTHETVLYILKKLDKEPEKAWCFFNWVSV-RCGFKPSASMY 131
Query: 237 NLILRILADHPDHLPDFWQLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHS 416
+L+LRI + +FW +++ MR G +D TYLT+L F KM +E +ALTQ S
Sbjct: 132 SLLLRIFGQKAS-MKEFWLIIKKMRDEGFDIDKETYLTILGTFNKEKMASEAAALTQLFS 190
Query: 417 NSEKESADDATIQLVLKTLRDSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGL 596
+ESA D+ ++LVL+ + S+ W++ + KKL E+ S SE TV +VL+ +R PLK L
Sbjct: 191 QIVQESATDSVVKLVLEIVLASD-WSDGIEKKLGELKLSLSENTVLRVLKELRGQPLKAL 249
Query: 597 GFFRWA-VACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
FF WA LDYKH +V YNA+ RVLGR +SI++FW +++ ++ G ++D+D+Y+KL
Sbjct: 250 KFFDWAGKQQDLDYKHNAVTYNAIIRVLGREESIEEFWKMIKVLRTAGHDVDLDSYIKL 308
Score = 75.5 bits (184), Expect = 8e-12
Identities = 40/130 (30%), Positives = 73/130 (56%)
Frame = +3
Query: 381 PTEVSALTQFHSNSEKESADDATIQLVLKTLRDSECWNEEMAKKLEEIGFSPSETTVAKV 560
P+ VSA H N S + ++L+L + W+EE+ K+LE +P+ TV +
Sbjct: 46 PSFVSAFLYGHQNLYFSSKPSSFVELIL-----ANEWSEEIEKELEGSNLTPTHETVLYI 100
Query: 561 LRVVRNTPLKGLGFFRWAVACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGF 740
L+ + P K FF W V+ +K + Y+ + R+ G+ S+K+FW ++++M+ EGF
Sbjct: 101 LKKLDKEPEKAWCFFNW-VSVRCGFKPSASMYSLLLRIFGQKASMKEFWLIIKKMRDEGF 159
Query: 741 EMDIDTYVKL 770
++D +TY+ +
Sbjct: 160 DIDKETYLTI 169
Score = 61.6 bits (148), Expect = 4e-07
Identities = 54/229 (23%), Positives = 108/229 (47%), Gaps = 9/229 (3%)
Frame = +3
Query: 111 SPTQESVVYVLKQLDKKPPKALEFFNHVTATHAA-FNPGPTAYNLILRILADHPDHLPDF 287
S ++ +V+ VLK+L +P KAL+FF+ + YN I+R+L + + +F
Sbjct: 228 SLSENTVLRVLKELRGQPLKALKFFDWAGKQQDLDYKHNAVTYNAIIRVLG-REESIEEF 286
Query: 288 WQLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSE-KESADDATIQL-- 458
W++++ +R+ GH +D +Y+ L +F+ KM + L + + K S D ++ L
Sbjct: 287 WKMIKVLRTAGHDVDLDSYIKLSRQFQKSKMMKDAVELYELMMDGPYKPSIQDCSVLLRQ 346
Query: 459 VLKTLRDSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVAC----- 623
+ T + + KK E G S S++ + R L +G F A
Sbjct: 347 ISLTAKPDLDLVFRVVKKYEATGHSLSKSVYDGIHR-----SLTSVGRFDEAERILESMK 401
Query: 624 SLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
Y+ ++ Y+ + L + +++ +++EM+++G D+ T+ L
Sbjct: 402 VAGYEPDNITYSQVVFGLCKARRLEEACKVLDEMEKKGCVPDLKTWTIL 450
>ref|XP_017973868.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Theobroma cacao]
Length = 631
Score = 188 bits (478), Expect = 4e-52
Identities = 101/218 (46%), Positives = 139/218 (63%)
Frame = +3
Query: 117 TQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQL 296
T E+V+YVLK+LDK P KA FFN + FNP Y+ +LR+LA D + +FW
Sbjct: 100 THETVIYVLKKLDKDPKKASNFFNWAREENG-FNPNSCVYSFMLRVLASK-DTMKEFWIT 157
Query: 297 LRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEKESADDATIQLVLKTLR 476
LR M+ G LD TY T+ S FK +KM T+V ALT F+ +E+A D+ ++ V
Sbjct: 158 LREMKDKGFYLDEETYYTIHSLFKKNKMNTDVVALTHFYKRMVEENAKDSIVKEVADVAL 217
Query: 477 DSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDYKHGSVAY 656
E W+ E+ K+L+++ S+ V +VL+ +R+ P KGL FF WA CS YKH +V Y
Sbjct: 218 GDE-WSNEIEKQLDDMKIVLSDNLVIRVLKELRSYPRKGLKFFHWAGKCS-SYKHNTVTY 275
Query: 657 NAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
NA+ RVL R DSI +FW +V+E+K EGFEMDIDTY+K+
Sbjct: 276 NALLRVLARRDSIGEFWSVVDELKGEGFEMDIDTYIKV 313
Score = 69.7 bits (169), Expect = 7e-10
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Frame = +3
Query: 339 TYLTLLSKFKSH-KMPTEVSALTQFHSNSEKESADDATIQLVLKTLRDSECWNEEMAKKL 515
T +T S+F SH S L H S ++ +QL++ + W++E+ +L
Sbjct: 38 TQVTHFSRFSSHLSFQPHSSHLLNTHQKLHFSSKPNSLVQLIV-----TNDWSDELETEL 92
Query: 516 EEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDYKHGSVAYNAMARVLGRVDSI 695
E+ + + TV VL+ + P K FF WA + S Y+ M RVL D++
Sbjct: 93 EKFKSALTHETVIYVLKKLDKDPKKASNFFNWARE-ENGFNPNSCVYSFMLRVLASKDTM 151
Query: 696 KDFWDLVEEMKREGFEMDIDTY 761
K+FW + EMK +GF +D +TY
Sbjct: 152 KEFWITLREMKDKGFYLDEETY 173
>ref|XP_018840083.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Juglans regia]
Length = 626
Score = 187 bits (474), Expect = 1e-51
Identities = 102/220 (46%), Positives = 143/220 (65%)
Frame = +3
Query: 111 SPTQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFW 290
S T E+V+Y+LK+LDK P KA +FFN V A F P + Y+L+LRIL + + + FW
Sbjct: 88 SLTHETVIYILKKLDKDPEKASDFFNWV-CEKAGFRPSSSVYSLMLRILVNK-ESMKQFW 145
Query: 291 QLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEKESADDATIQLVLKT 470
LR M+ G +D TYLTLL +FK KM ++V+AL F+S E+A + ++ V+
Sbjct: 146 VTLRKMKEEGFYVDEETYLTLLGQFKKGKMASDVTALKHFYSRMLVENAMENVVKKVVDI 205
Query: 471 LRDSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDYKHGSV 650
+ +SE W +E+ +LEE+ S+ V +VL+ +RN P K L FF W CS Y H +V
Sbjct: 206 VLESE-WTDEVEHELEELKIVLSDNFVIRVLKELRNYPSKALKFFYWVGRCS-GYGHNAV 263
Query: 651 AYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
YNA+ARVLGR DSI+ FW +VEE+K G+EMDIDTY+K+
Sbjct: 264 TYNAIARVLGRDDSIELFWSVVEEIKSAGYEMDIDTYIKI 303
Score = 67.0 bits (162), Expect = 6e-09
Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 5/219 (2%)
Frame = +3
Query: 129 VVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILRILADHPDHLPDFWQLLRSM 308
V+ VLK+L P KAL+FF V + + YN I R+L D + FW ++ +
Sbjct: 231 VIRVLKELRNYPSKALKFFYWVGRC-SGYGHNAVTYNAIARVLG-RDDSIELFWSVVEEI 288
Query: 309 RSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSE-KESADDATIQLVLKTLRDSE 485
+S G+ +D TY+ + +F+ +KM + L +F + K S D + ++L+T+ +
Sbjct: 289 KSAGYEMDIDTYIKISRQFQKYKMMEDAVKLYEFMMDGPFKPSVQDCS--MLLRTISAGD 346
Query: 486 CWNEEM----AKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRWAVACSLDYKHGSVA 653
N ++ AKK E +G + S+ + R + + V + Y+ ++
Sbjct: 347 NPNLDLVFRVAKKYESMGHTLSKAVYDGIHRSLTSAGRFDEAENIMKVMRNAGYQPDNIT 406
Query: 654 YNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
Y+ + L ++ +++ +++EM+ +G DI T+ L
Sbjct: 407 YSQVVFGLCKMRRLEEACKVLDEMEEQGCLPDIKTWTIL 445
Score = 58.5 bits (140), Expect = 4e-06
Identities = 35/113 (30%), Positives = 59/113 (52%)
Frame = +3
Query: 432 SADDATIQLVLKTLRDSECWNEEMAKKLEEIGFSPSETTVAKVLRVVRNTPLKGLGFFRW 611
S + ++L+L S W++E+ L++ S + TV +L+ + P K FF W
Sbjct: 60 SKPSSVVELLL-----SNDWSDELELDLKKSYPSLTHETVIYILKKLDKDPEKASDFFNW 114
Query: 612 AVACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
V ++ S Y+ M R+L +S+K FW + +MK EGF +D +TY+ L
Sbjct: 115 -VCEKAGFRPSSSVYSLMLRILVNKESMKQFWVTLRKMKEEGFYVDEETYLTL 166
>ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Brachypodium distachyon]
gb|KQK11731.1| hypothetical protein BRADI_2g61970v3 [Brachypodium distachyon]
Length = 585
Score = 185 bits (470), Expect = 3e-51
Identities = 108/239 (45%), Positives = 148/239 (61%), Gaps = 6/239 (2%)
Frame = +3
Query: 72 SSSSLTNPDPNPKSPTQESVVYVLKQLDKKPPKALEFFNHVTATHAAFNPGPTAYNLILR 251
S+++ T+P P P SPT ESV+Y L+ L K PP AL FF A G AYNL+LR
Sbjct: 27 STATATSPRP-PTSPTTESVLYSLRSLSKDPPLALAFFRRSAA--GGHPLGSAAYNLMLR 83
Query: 252 ILADHPDHLPD-FWQLLRSMRSYGHSLDHGTYLTLLSKFKSHKMPTEVSALTQFHSNSEK 428
LA P D FW LR M + GHS+D GTYL L+ FK ++ + ++L+ +
Sbjct: 84 TLASRPASAQDHFWPFLRDMEAAGHSVDQGTYLAALASFKKARLAADYASLSARLAKDRD 143
Query: 429 ESAD--DATIQLVLKTLRDSECWNEE-MAKKLEEIGF--SPSETTVAKVLRVVRNTPLKG 593
++A + + +R E ++E + K+LE + +ETTVAKVLR +R+ P+K
Sbjct: 144 DAAQAGGTPVSAAAEAVRGLEEGSDEALEKRLEGVDLLLPLTETTVAKVLRELRDCPVKA 203
Query: 594 LGFFRWAVACSLDYKHGSVAYNAMARVLGRVDSIKDFWDLVEEMKREGFEMDIDTYVKL 770
LGFFRWA Y HGSVAYNAMARVLGR +S+++FW+L++EMK +G +DIDTYVKL
Sbjct: 204 LGFFRWA-GRQKGYTHGSVAYNAMARVLGREESVQEFWELIQEMKADGIYLDIDTYVKL 261