BLASTX nr result

ID: Ophiopogon22_contig00033613 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00033613
         (352 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIA65666.1| hypothetical protein AQUCO_00100875v1 [Aquilegia ...    53   4e-06
ref|XP_006596183.1| PREDICTED: exosome complex component RRP43-l...    54   8e-06

>gb|PIA65666.1| hypothetical protein AQUCO_00100875v1 [Aquilegia coerulea]
          Length = 143

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 21/31 (67%), Positives = 29/31 (93%)
 Frame = +3

Query: 237 ICILMQDIYCLNADGSLFDAALLSAIAAFSH 329
           +  ++QD+YCLNADG++FDAALLSA++AFSH
Sbjct: 4   LTFVLQDVYCLNADGAIFDAALLSAVSAFSH 34


>ref|XP_006596183.1| PREDICTED: exosome complex component RRP43-like isoform X1 [Glycine
           max]
 ref|XP_006596184.1| PREDICTED: exosome complex component RRP43-like isoform X1 [Glycine
           max]
 gb|KRH16280.1| hypothetical protein GLYMA_14G145600 [Glycine max]
          Length = 307

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = +3

Query: 219 LMYLRLICILMQDIYCLNADGSLFDAALLSAIAAFSH 329
           + YL     +MQDIYCL+ADG+LFDAAL+SA+AA SH
Sbjct: 148 MAYLNAAFSIMQDIYCLDADGALFDAALISAVAALSH 184


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