BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00033527
         (1759 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophio...  1103   0.0  
gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Lirio...  1100   0.0  
gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasyl...  1089   0.0  
gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beauc...  1088   0.0  
ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [...  1086   0.0  
ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [...  1083   0.0  
ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [N...  1080   0.0  
ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [...  1077   0.0  
gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscu...  1077   0.0  
gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maian...  1076   0.0  
ref|YP_009335154.1| RNA polymerase beta subunit (chloroplast) [H...  1068   0.0  
gb|AEX94835.1| RNA polymerase beta' subunit (chloroplast) [Sanse...  1067   0.0  
ref|YP_009335578.1| RNA polymerase beta subunit (chloroplast) [Y...  1066   0.0  
ref|YP_009334818.1| RNA polymerase beta subunit (chloroplast) [H...  1065   0.0  
ref|YP_009335069.1| RNA polymerase beta subunit (chloroplast) [H...  1064   0.0  
ref|YP_009334309.1| RNA polymerase beta subunit (chloroplast) [A...  1064   0.0  
ref|YP_009045556.1| RNA polymerase betasubunit (chloroplast) [Cy...  1064   0.0  
ref|YP_009335237.1| RNA polymerase beta subunit (chloroplast) [M...  1064   0.0  
ref|YP_009432631.1| RNA polymerase beta' subunit (chloroplast) [...  1064   0.0  
ref|YP_009432547.1| RNA polymerase beta' subunit (chloroplast) [...  1063   0.0  

>gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophiopogon japonicus]
          Length = 1381

 Score = 1103 bits (2852), Expect = 0.0
 Identities = 552/554 (99%), Positives = 552/554 (99%)
 Frame = -3

Query: 1664 WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 1485
            WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG
Sbjct: 760  WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 819

Query: 1484 KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTIS 1305
            KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKSTIS
Sbjct: 820  KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTIS 879

Query: 1304 YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILS 1125
            YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILS
Sbjct: 880  YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILS 939

Query: 1124 SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 945
            SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN
Sbjct: 940  SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 999

Query: 944  KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 765
            KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST
Sbjct: 1000 KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 1059

Query: 764  TISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 585
            TISIGQFFCENICLFKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS
Sbjct: 1060 TISIGQFFCENICLFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 1119

Query: 584  EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 405
            EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW
Sbjct: 1120 EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 1179

Query: 404  GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 225
            GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL
Sbjct: 1180 GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 1239

Query: 224  PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 45
            PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG
Sbjct: 1240 PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 1299

Query: 44   RIDWLKGLKENVVL 3
            RIDWLKGLKENVVL
Sbjct: 1300 RIDWLKGLKENVVL 1313


>gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Liriope spicata]
          Length = 1385

 Score = 1100 bits (2845), Expect = 0.0
 Identities = 551/554 (99%), Positives = 551/554 (99%)
 Frame = -3

Query: 1664 WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 1485
            WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG
Sbjct: 764  WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 823

Query: 1484 KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTIS 1305
            KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKSTIS
Sbjct: 824  KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTIS 883

Query: 1304 YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILS 1125
            YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL ILS
Sbjct: 884  YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRILS 943

Query: 1124 SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 945
            SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN
Sbjct: 944  SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 1003

Query: 944  KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 765
            KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST
Sbjct: 1004 KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 1063

Query: 764  TISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 585
            TISIGQFFCENICLFKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS
Sbjct: 1064 TISIGQFFCENICLFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 1123

Query: 584  EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 405
            EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW
Sbjct: 1124 EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 1183

Query: 404  GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 225
            GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL
Sbjct: 1184 GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 1243

Query: 224  PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 45
            PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG
Sbjct: 1244 PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 1303

Query: 44   RIDWLKGLKENVVL 3
            RIDWLKGLKENVVL
Sbjct: 1304 RIDWLKGLKENVVL 1317


>gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasylirion wheeleri]
          Length = 1385

 Score = 1089 bits (2817), Expect = 0.0
 Identities = 546/554 (98%), Positives = 547/554 (98%)
 Frame = -3

Query: 1664 WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 1485
            WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG
Sbjct: 764  WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 823

Query: 1484 KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTIS 1305
            KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKSTIS
Sbjct: 824  KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTIS 883

Query: 1304 YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILS 1125
            YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL ILS
Sbjct: 884  YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRILS 943

Query: 1124 SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 945
            SFNCFRV PFNGSKYNNVAKESNPITPI+GLLGPLGTIVPKIVNFYSSYHLITHNQILLN
Sbjct: 944  SFNCFRVVPFNGSKYNNVAKESNPITPIRGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 1003

Query: 944  KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 765
            KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST
Sbjct: 1004 KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 1063

Query: 764  TISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 585
             ISIGQF CENICLFKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS
Sbjct: 1064 IISIGQFICENICLFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 1123

Query: 584  EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 405
            EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW
Sbjct: 1124 EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 1183

Query: 404  GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 225
            GFLIG ELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL
Sbjct: 1184 GFLIGVELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 1243

Query: 224  PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 45
            PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG
Sbjct: 1244 PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 1303

Query: 44   RIDWLKGLKENVVL 3
            RIDWLKGLKENVVL
Sbjct: 1304 RIDWLKGLKENVVL 1317


>gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beaucarnea hookeri]
          Length = 1385

 Score = 1088 bits (2813), Expect = 0.0
 Identities = 545/554 (98%), Positives = 547/554 (98%)
 Frame = -3

Query: 1664 WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 1485
            WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG
Sbjct: 764  WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 823

Query: 1484 KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTIS 1305
            KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKSTIS
Sbjct: 824  KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTIS 883

Query: 1304 YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILS 1125
            YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVT+HQGTIGTLLNRNKEGQSL ILS
Sbjct: 884  YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTKHQGTIGTLLNRNKEGQSLRILS 943

Query: 1124 SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 945
            SFNCFRV PFNGSKYNNVAKESNPITPI+GLLGPLGTIVPKIVNFYSSYHLITHNQILLN
Sbjct: 944  SFNCFRVVPFNGSKYNNVAKESNPITPIRGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 1003

Query: 944  KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 765
            KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST
Sbjct: 1004 KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 1063

Query: 764  TISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 585
             ISIGQF CENICLFKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS
Sbjct: 1064 IISIGQFICENICLFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 1123

Query: 584  EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 405
            EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW
Sbjct: 1124 EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 1183

Query: 404  GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 225
            GFLIG ELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL
Sbjct: 1184 GFLIGVELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 1243

Query: 224  PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 45
            PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG
Sbjct: 1244 PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 1303

Query: 44   RIDWLKGLKENVVL 3
            RIDWLKGLKENVVL
Sbjct: 1304 RIDWLKGLKENVVL 1317


>ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum stenophyllum]
 gb|ATB18548.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum stenophyllum]
          Length = 1381

 Score = 1086 bits (2808), Expect = 0.0
 Identities = 544/554 (98%), Positives = 546/554 (98%)
 Frame = -3

Query: 1664 WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 1485
            WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG
Sbjct: 760  WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 819

Query: 1484 KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTIS 1305
            KSIRGIYHTSIQLVRTCLVLNWDQEKN SMEEVHASFVEVRAN LIRDFIRIELVKSTIS
Sbjct: 820  KSIRGIYHTSIQLVRTCLVLNWDQEKNSSMEEVHASFVEVRANDLIRDFIRIELVKSTIS 879

Query: 1304 YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILS 1125
            YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKI LVTQHQGTIGTLLNRNKEGQSL ILS
Sbjct: 880  YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKISLVTQHQGTIGTLLNRNKEGQSLRILS 939

Query: 1124 SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 945
            SFNCFRVGPFNGSKYNNVAKESNPITPI+GLLGPLGTIVPKIVNFYSSYHLITHNQILLN
Sbjct: 940  SFNCFRVGPFNGSKYNNVAKESNPITPIRGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 999

Query: 944  KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 765
            KYWLLDNFKQTF+VLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST
Sbjct: 1000 KYWLLDNFKQTFKVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 1059

Query: 764  TISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 585
             ISIGQF CENICLFKYGP IKKSGQI IVHVDSLIIRSAKPYLATPGATVHGHYGETLS
Sbjct: 1060 IISIGQFICENICLFKYGPHIKKSGQIFIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 1119

Query: 584  EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 405
            EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW
Sbjct: 1120 EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 1179

Query: 404  GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 225
            GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL
Sbjct: 1180 GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 1239

Query: 224  PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 45
            PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG
Sbjct: 1240 PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 1299

Query: 44   RIDWLKGLKENVVL 3
            RIDWLKGLKENVVL
Sbjct: 1300 RIDWLKGLKENVVL 1313


>ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
            verticillatum]
 ref|YP_009236350.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
            sibiricum]
 gb|ALM87707.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
            verticillatum]
 gb|AMF84063.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
            sibiricum]
          Length = 1382

 Score = 1083 bits (2802), Expect = 0.0
 Identities = 543/553 (98%), Positives = 546/553 (98%)
 Frame = -3

Query: 1661 IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK 1482
            IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK
Sbjct: 762  IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK 821

Query: 1481 SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTISY 1302
            SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKSTISY
Sbjct: 822  SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTISY 881

Query: 1301 TGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILSS 1122
            T KRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL ILSS
Sbjct: 882  TEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRILSS 941

Query: 1121 FNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLNK 942
            FNCFRVGPFNGSKYNNVAKESNPITPI+GLLGPLGTIVPKIVNFYSSYHLITHNQILLNK
Sbjct: 942  FNCFRVGPFNGSKYNNVAKESNPITPIRGLLGPLGTIVPKIVNFYSSYHLITHNQILLNK 1001

Query: 941  YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETSTT 762
            YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 
Sbjct: 1002 YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETSTI 1061

Query: 761  ISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE 582
            ISIGQF CENICLFKYGP I+KSGQI IVHVDSLIIRSAKPYLATPGATVHGHYGETLSE
Sbjct: 1062 ISIGQFICENICLFKYGPHIQKSGQIFIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE 1121

Query: 581  GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG 402
            GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG
Sbjct: 1122 GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG 1181

Query: 401  FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP 222
            FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP
Sbjct: 1182 FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP 1241

Query: 221  GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 42
            GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR
Sbjct: 1242 GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 1301

Query: 41   IDWLKGLKENVVL 3
            IDWLKGLKENV+L
Sbjct: 1302 IDWLKGLKENVIL 1314


>ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
 gb|AEZ49490.1| RNA polymerase beta'' subunit, partial (plastid) [Nolina atopocarpa]
 gb|APO12381.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
          Length = 1385

 Score = 1080 bits (2792), Expect = 0.0
 Identities = 543/553 (98%), Positives = 544/553 (98%)
 Frame = -3

Query: 1661 IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK 1482
            IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK
Sbjct: 765  IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK 824

Query: 1481 SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTISY 1302
            SIR IYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKSTISY
Sbjct: 825  SIREIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTISY 884

Query: 1301 TGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILSS 1122
            TGKRYD AGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL ILSS
Sbjct: 885  TGKRYDMAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRILSS 944

Query: 1121 FNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLNK 942
            FNCFRV PFNGSKYNNVAKESNPITPI+GLLGPLGTIVPKIVNFYSSYHLITHNQILLNK
Sbjct: 945  FNCFRVVPFNGSKYNNVAKESNPITPIRGLLGPLGTIVPKIVNFYSSYHLITHNQILLNK 1004

Query: 941  YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETSTT 762
            YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 
Sbjct: 1005 YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETSTI 1064

Query: 761  ISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE 582
            ISIGQF CENICLFKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE
Sbjct: 1065 ISIGQFICENICLFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE 1124

Query: 581  GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG 402
            GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG
Sbjct: 1125 GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG 1184

Query: 401  FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP 222
            FLIG ELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP
Sbjct: 1185 FLIGVELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP 1244

Query: 221  GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 42
            GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR
Sbjct: 1245 GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 1304

Query: 41   IDWLKGLKENVVL 3
            IDWLKGLKENVVL
Sbjct: 1305 IDWLKGLKENVVL 1317


>ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
 gb|ASW26644.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
          Length = 1381

 Score = 1077 bits (2784), Expect = 0.0
 Identities = 542/553 (98%), Positives = 544/553 (98%)
 Frame = -3

Query: 1661 IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK 1482
            IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK
Sbjct: 761  IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK 820

Query: 1481 SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTISY 1302
            SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKSTISY
Sbjct: 821  SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTISY 880

Query: 1301 TGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILSS 1122
            TGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL ILSS
Sbjct: 881  TGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRILSS 940

Query: 1121 FNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLNK 942
            FNCFRVGPFNGSKYNNVAKESNPITPI+GLLGPLGTIVPKIVNF SSYHLITHNQILLNK
Sbjct: 941  FNCFRVGPFNGSKYNNVAKESNPITPIRGLLGPLGTIVPKIVNFSSSYHLITHNQILLNK 1000

Query: 941  YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETSTT 762
            YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSP NNIILNPSHLNWCFLHYNYCEETST 
Sbjct: 1001 YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPSNNIILNPSHLNWCFLHYNYCEETSTI 1060

Query: 761  ISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE 582
            ISIGQF CENI +FKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE
Sbjct: 1061 ISIGQFICENISIFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE 1120

Query: 581  GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG 402
            GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG
Sbjct: 1121 GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG 1180

Query: 401  FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP 222
            FLIGAELTI QSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP
Sbjct: 1181 FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP 1240

Query: 221  GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 42
            GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR
Sbjct: 1241 GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 1300

Query: 41   IDWLKGLKENVVL 3
            IDWLKGLKENVVL
Sbjct: 1301 IDWLKGLKENVVL 1313


>gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscus aculeatus]
          Length = 1387

 Score = 1077 bits (2784), Expect = 0.0
 Identities = 541/553 (97%), Positives = 542/553 (98%)
 Frame = -3

Query: 1661 IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK 1482
            IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK
Sbjct: 765  IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK 824

Query: 1481 SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTISY 1302
            SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKSTISY
Sbjct: 825  SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTISY 884

Query: 1301 TGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILSS 1122
            T KRYD  GSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL ILSS
Sbjct: 885  TEKRYDMTGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRILSS 944

Query: 1121 FNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLNK 942
            FNCFRVGPFNGSKYNNV KESNPITPI+GLLGPLG IVPKIVNFYSSYHLITHNQILLNK
Sbjct: 945  FNCFRVGPFNGSKYNNVTKESNPITPIRGLLGPLGIIVPKIVNFYSSYHLITHNQILLNK 1004

Query: 941  YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETSTT 762
            YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 
Sbjct: 1005 YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETSTI 1064

Query: 761  ISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE 582
            ISIGQF CEN CLFKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE
Sbjct: 1065 ISIGQFICENRCLFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE 1124

Query: 581  GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG 402
            GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG
Sbjct: 1125 GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG 1184

Query: 401  FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP 222
            FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP
Sbjct: 1185 FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP 1244

Query: 221  GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 42
            GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR
Sbjct: 1245 GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 1304

Query: 41   IDWLKGLKENVVL 3
            IDWLKGLKENVVL
Sbjct: 1305 IDWLKGLKENVVL 1317


>gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum stellatum]
          Length = 1385

 Score = 1076 bits (2782), Expect = 0.0
 Identities = 541/553 (97%), Positives = 544/553 (98%)
 Frame = -3

Query: 1661 IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK 1482
            IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLF QDLLQEKENVQLRVVNYILYGNGK
Sbjct: 765  IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFSQDLLQEKENVQLRVVNYILYGNGK 824

Query: 1481 SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTISY 1302
            SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRAN LIRDFIRIELVKSTISY
Sbjct: 825  SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTISY 884

Query: 1301 TGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILSS 1122
            TGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL ILSS
Sbjct: 885  TGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRILSS 944

Query: 1121 FNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLNK 942
            FNCFRVGPFNGSKYNNVAKESNPITPI+GLLGPLGTIVPKIVNFYSSYHLITHNQILLNK
Sbjct: 945  FNCFRVGPFNGSKYNNVAKESNPITPIRGLLGPLGTIVPKIVNFYSSYHLITHNQILLNK 1004

Query: 941  YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETSTT 762
            YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSP NNIILNPSHLNWCFLHYNYCEETST 
Sbjct: 1005 YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPWNNIILNPSHLNWCFLHYNYCEETSTI 1064

Query: 761  ISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE 582
            ISIGQF CENI +FKYGP IKKSGQI+IVHVDSLIIRSAKPYLATPGATVHGHYGETLSE
Sbjct: 1065 ISIGQFICENISIFKYGPHIKKSGQIIIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE 1124

Query: 581  GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG 402
            GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG
Sbjct: 1125 GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG 1184

Query: 401  FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP 222
            FLIGAELTI QSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP
Sbjct: 1185 FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP 1244

Query: 221  GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 42
            GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR
Sbjct: 1245 GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 1304

Query: 41   IDWLKGLKENVVL 3
            IDWLKGLKENVVL
Sbjct: 1305 IDWLKGLKENVVL 1317


>ref|YP_009335154.1| RNA polymerase beta subunit (chloroplast) [Hosta ventricosa]
 gb|AEX94804.1| RNA polymerase beta' subunit (chloroplast) [Hosta ventricosa]
 gb|APO12212.1| RNA polymerase beta subunit (chloroplast) [Hosta ventricosa]
          Length = 1384

 Score = 1068 bits (2763), Expect = 0.0
 Identities = 536/554 (96%), Positives = 541/554 (97%)
 Frame = -3

Query: 1664 WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 1485
            WIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+NVQLRVVNYILYGNG
Sbjct: 761  WIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKDNVQLRVVNYILYGNG 820

Query: 1484 KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTIS 1305
            KSIRGI HTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKSTIS
Sbjct: 821  KSIRGISHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTIS 880

Query: 1304 YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILS 1125
            YT KRYDTAGSGLIPDNGLDRTNINPFYSK KIPLVTQHQ T+GTLLNRNKE QSLIILS
Sbjct: 881  YTVKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLVTQHQETVGTLLNRNKECQSLIILS 940

Query: 1124 SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 945
            SFNCFRVGPFNGSKYNNVAKESNPITPI+ LLGPLGTIVPKIVNFYSSYHLITHNQILLN
Sbjct: 941  SFNCFRVGPFNGSKYNNVAKESNPITPIRDLLGPLGTIVPKIVNFYSSYHLITHNQILLN 1000

Query: 944  KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 765
            KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCNNIILNP HLNWCFLHYNYCEETST
Sbjct: 1001 KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCNNIILNPFHLNWCFLHYNYCEETST 1060

Query: 764  TISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 585
             ISIGQF CENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETL 
Sbjct: 1061 IISIGQFICENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLF 1120

Query: 584  EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 405
            EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPR+LGIPW
Sbjct: 1121 EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRILGIPW 1180

Query: 404  GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 225
            GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL
Sbjct: 1181 GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 1240

Query: 224  PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 45
            PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG
Sbjct: 1241 PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 1300

Query: 44   RIDWLKGLKENVVL 3
            RIDWLKGLKENVVL
Sbjct: 1301 RIDWLKGLKENVVL 1314


>gb|AEX94835.1| RNA polymerase beta' subunit (chloroplast) [Sansevieria trifasciata]
          Length = 1384

 Score = 1067 bits (2759), Expect = 0.0
 Identities = 535/554 (96%), Positives = 540/554 (97%)
 Frame = -3

Query: 1664 WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 1485
            WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG
Sbjct: 761  WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 820

Query: 1484 KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTIS 1305
            KSIRGIYHTSIQLVRTCLVLNW+QEKNGSMEEVHASFVEVRAN LIRDFIRIELVKSTIS
Sbjct: 821  KSIRGIYHTSIQLVRTCLVLNWNQEKNGSMEEVHASFVEVRANDLIRDFIRIELVKSTIS 880

Query: 1304 YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILS 1125
            YTGKRYDTAGSGLIPDN LDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSL ILS
Sbjct: 881  YTGKRYDTAGSGLIPDNRLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLRILS 940

Query: 1124 SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 945
            SFNCF VGPFNGSKYNNV KESNPITPI+GLLGPLGTIVPKIVNFYSSYHLITHNQILLN
Sbjct: 941  SFNCFGVGPFNGSKYNNVVKESNPITPIRGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 1000

Query: 944  KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 765
            KYWL DNFKQTFQVL+VLKYCLIDEN+RIYNPSPCNNIILNPSHLNWCFLHYNYCE+T T
Sbjct: 1001 KYWLFDNFKQTFQVLQVLKYCLIDENKRIYNPSPCNNIILNPSHLNWCFLHYNYCEKTPT 1060

Query: 764  TISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 585
             ISIGQF CENICLFKYGP IKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS
Sbjct: 1061 IISIGQFICENICLFKYGPHIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 1120

Query: 584  EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 405
            EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERI RVL IPW
Sbjct: 1121 EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERISRVLEIPW 1180

Query: 404  GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 225
            GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIV QVTSKVLVSEDGMSNVFL
Sbjct: 1181 GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVWQVTSKVLVSEDGMSNVFL 1240

Query: 224  PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 45
            PGELIGLLRAERAGRALDEAICYRAI LGITRASLNTQSFISEASFQETARVLAKAALRG
Sbjct: 1241 PGELIGLLRAERAGRALDEAICYRAIFLGITRASLNTQSFISEASFQETARVLAKAALRG 1300

Query: 44   RIDWLKGLKENVVL 3
            RIDWLKGLKENVVL
Sbjct: 1301 RIDWLKGLKENVVL 1314


>ref|YP_009335578.1| RNA polymerase beta subunit (chloroplast) [Yucca brevifolia]
 ref|YP_009335748.1| RNA polymerase beta subunit (chloroplast) [Yucca queretaroensis]
 ref|YP_009335833.1| RNA polymerase beta subunit (chloroplast) [Yucca schidigera]
 gb|AAZ03984.1| RNA polymerase beta'' chain, partial (chloroplast) [Yucca schidigera]
 gb|APO12722.1| RNA polymerase beta subunit (chloroplast) [Yucca brevifolia]
 gb|APO12892.1| RNA polymerase beta subunit (chloroplast) [Yucca queretaroensis]
 gb|APO12977.1| RNA polymerase beta subunit (chloroplast) [Yucca schidigera]
          Length = 1384

 Score = 1066 bits (2756), Expect = 0.0
 Identities = 535/553 (96%), Positives = 540/553 (97%)
 Frame = -3

Query: 1661 IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK 1482
            IYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK
Sbjct: 762  IYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK 821

Query: 1481 SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTISY 1302
            SIRGI HTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKSTISY
Sbjct: 822  SIRGISHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTISY 881

Query: 1301 TGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILSS 1122
            TGKRYDTAGSGLIPDNGLDRTNINPFYSK KIPLVTQHQ T+GTLLNRNKE QSLIILSS
Sbjct: 882  TGKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLVTQHQETVGTLLNRNKECQSLIILSS 941

Query: 1121 FNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLNK 942
            FNCFRVGPFNG KYNNVAKESNPITPI+ LLGPLGTIVPKIVNFYSSYHLITHNQILLNK
Sbjct: 942  FNCFRVGPFNGPKYNNVAKESNPITPIRDLLGPLGTIVPKIVNFYSSYHLITHNQILLNK 1001

Query: 941  YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETSTT 762
            YWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCNNIILNP HLNWCFLHYNYCEETST 
Sbjct: 1002 YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCNNIILNPFHLNWCFLHYNYCEETSTI 1061

Query: 761  ISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE 582
            ISIGQF CENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETL E
Sbjct: 1062 ISIGQFICENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLFE 1121

Query: 581  GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG 402
            GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPR+LGIPWG
Sbjct: 1122 GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRILGIPWG 1181

Query: 401  FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP 222
            FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSN+FLP
Sbjct: 1182 FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNLFLP 1241

Query: 221  GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 42
            GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR
Sbjct: 1242 GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 1301

Query: 41   IDWLKGLKENVVL 3
            IDWLKGLKENVVL
Sbjct: 1302 IDWLKGLKENVVL 1314


>ref|YP_009334818.1| RNA polymerase beta subunit (chloroplast) [Hesperaloe campanulata]
 gb|APO11876.1| RNA polymerase beta subunit (chloroplast) [Hesperaloe campanulata]
          Length = 1384

 Score = 1065 bits (2755), Expect = 0.0
 Identities = 534/554 (96%), Positives = 540/554 (97%)
 Frame = -3

Query: 1664 WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 1485
            WIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+NVQLRVVNYILYGNG
Sbjct: 761  WIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKDNVQLRVVNYILYGNG 820

Query: 1484 KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTIS 1305
            KSIRGI HTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKSTIS
Sbjct: 821  KSIRGISHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTIS 880

Query: 1304 YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILS 1125
            YTGKRYDTAGSGLIPDNGLDRTNINPFYSK KIPLVTQHQ T+GTLLNRNKE QSLIILS
Sbjct: 881  YTGKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLVTQHQETVGTLLNRNKECQSLIILS 940

Query: 1124 SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 945
            SFNCFRVGPFNGSKYNNVAKESNPITPI+ LLGPLGTIVPKIVNFYSSYHLIT NQILLN
Sbjct: 941  SFNCFRVGPFNGSKYNNVAKESNPITPIRDLLGPLGTIVPKIVNFYSSYHLITQNQILLN 1000

Query: 944  KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 765
            KYWLLDNFKQTFQ+LEVLKYCLIDENRRIYNP PCNNIILNP  LNWCFLHYNYCEETST
Sbjct: 1001 KYWLLDNFKQTFQILEVLKYCLIDENRRIYNPGPCNNIILNPFRLNWCFLHYNYCEETST 1060

Query: 764  TISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 585
             ISIGQF CENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETL 
Sbjct: 1061 IISIGQFICENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLF 1120

Query: 584  EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 405
            EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPR+LGIPW
Sbjct: 1121 EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRILGIPW 1180

Query: 404  GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 225
            GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL
Sbjct: 1181 GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 1240

Query: 224  PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 45
            PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG
Sbjct: 1241 PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 1300

Query: 44   RIDWLKGLKENVVL 3
            RIDWLKGLKENVVL
Sbjct: 1301 RIDWLKGLKENVVL 1314


>ref|YP_009335069.1| RNA polymerase beta subunit (chloroplast) [Hesperoyucca whipplei]
 gb|APO12127.1| RNA polymerase beta subunit (chloroplast) [Hesperoyucca whipplei]
          Length = 1384

 Score = 1064 bits (2752), Expect = 0.0
 Identities = 534/554 (96%), Positives = 539/554 (97%)
 Frame = -3

Query: 1664 WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 1485
            WIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+NVQLRVVNYILYGNG
Sbjct: 761  WIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKDNVQLRVVNYILYGNG 820

Query: 1484 KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTIS 1305
            KSIRGI HTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKSTIS
Sbjct: 821  KSIRGISHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTIS 880

Query: 1304 YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILS 1125
            YTGKRYDTAGSGLIPDNGLDRTNINPFYSK KIPLVTQHQ T+GTLLNRNKE QSLIILS
Sbjct: 881  YTGKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLVTQHQETVGTLLNRNKECQSLIILS 940

Query: 1124 SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 945
            SFNCFRVGPFNGSKYNN AKESNPITPI+ LLGPLGTIVPKIVNFYSSY LITHNQILLN
Sbjct: 941  SFNCFRVGPFNGSKYNNAAKESNPITPIRDLLGPLGTIVPKIVNFYSSYRLITHNQILLN 1000

Query: 944  KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 765
            KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCNNIILNP  LNWCFLHYNYCEETST
Sbjct: 1001 KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCNNIILNPFRLNWCFLHYNYCEETST 1060

Query: 764  TISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 585
             ISIGQF CENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETL 
Sbjct: 1061 IISIGQFICENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLF 1120

Query: 584  EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 405
            EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPR+LGIPW
Sbjct: 1121 EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRILGIPW 1180

Query: 404  GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 225
            GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL
Sbjct: 1181 GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 1240

Query: 224  PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 45
            PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG
Sbjct: 1241 PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 1300

Query: 44   RIDWLKGLKENVVL 3
            RIDWLKGLKENVVL
Sbjct: 1301 RIDWLKGLKENVVL 1314


>ref|YP_009334309.1| RNA polymerase beta subunit (chloroplast) [Agave attenuata]
 gb|APO11119.1| RNA polymerase beta subunit (chloroplast) [Agave attenuata]
          Length = 1384

 Score = 1064 bits (2752), Expect = 0.0
 Identities = 534/553 (96%), Positives = 539/553 (97%)
 Frame = -3

Query: 1661 IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK 1482
            IYVQRITP KKKYFVLVRPVVTYEIADGINL KLFPQDLLQEK+NVQLRVVNYILYGNGK
Sbjct: 762  IYVQRITPTKKKYFVLVRPVVTYEIADGINLEKLFPQDLLQEKDNVQLRVVNYILYGNGK 821

Query: 1481 SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTISY 1302
            SIRGI HTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKSTISY
Sbjct: 822  SIRGISHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTISY 881

Query: 1301 TGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILSS 1122
            TGKRYDTAGSGLIPDNGLDRTNINPFYSK KIPLVTQHQ T+GTLLNRNKE QSLIILSS
Sbjct: 882  TGKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLVTQHQETVGTLLNRNKECQSLIILSS 941

Query: 1121 FNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLNK 942
            FNCFRVGPFNGSKYNN AKESNPITPI+ LLGPLGTIVPKIVNFYSSYHLITHNQILLNK
Sbjct: 942  FNCFRVGPFNGSKYNNAAKESNPITPIRDLLGPLGTIVPKIVNFYSSYHLITHNQILLNK 1001

Query: 941  YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETSTT 762
            YWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCNNIILNP HLNWCFLHYNYCEETST 
Sbjct: 1002 YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCNNIILNPFHLNWCFLHYNYCEETSTI 1061

Query: 761  ISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE 582
            ISIGQF CENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETL E
Sbjct: 1062 ISIGQFICENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLFE 1121

Query: 581  GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG 402
            GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPR+LGIPWG
Sbjct: 1122 GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRILGIPWG 1181

Query: 401  FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP 222
            FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP
Sbjct: 1182 FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP 1241

Query: 221  GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 42
            GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR
Sbjct: 1242 GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 1301

Query: 41   IDWLKGLKENVVL 3
            IDWLKGLKENVVL
Sbjct: 1302 IDWLKGLKENVVL 1314


>ref|YP_009045556.1| RNA polymerase betasubunit (chloroplast) [Cypripedium macranthos]
 gb|AHI16739.1| RNA polymerase betasubunit (chloroplast) (chloroplast) [Cypripedium
            macranthos]
          Length = 1380

 Score = 1064 bits (2752), Expect = 0.0
 Identities = 534/554 (96%), Positives = 539/554 (97%)
 Frame = -3

Query: 1664 WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 1485
            WIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+NVQLRVVNYILYGNG
Sbjct: 757  WIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKDNVQLRVVNYILYGNG 816

Query: 1484 KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTIS 1305
            KSIRGI HTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKSTIS
Sbjct: 817  KSIRGISHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTIS 876

Query: 1304 YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILS 1125
            YT KRYDTAGSGLIPDNGLDRTNINPFYSK KIPLVTQHQ T+GTLLNRNKE QSLIILS
Sbjct: 877  YTVKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLVTQHQETVGTLLNRNKECQSLIILS 936

Query: 1124 SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 945
            SFNCFRVGPFNGSKYNNVAKESNPITPI+ LLGPLGTIVPKIVNFYSSYHLITHNQILLN
Sbjct: 937  SFNCFRVGPFNGSKYNNVAKESNPITPIRDLLGPLGTIVPKIVNFYSSYHLITHNQILLN 996

Query: 944  KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 765
            KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCNNIILNP HLNWCF HYNYCEETST
Sbjct: 997  KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCNNIILNPFHLNWCFPHYNYCEETST 1056

Query: 764  TISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 585
             ISIGQF CENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETL 
Sbjct: 1057 IISIGQFICENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLF 1116

Query: 584  EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 405
            EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPR+LGIPW
Sbjct: 1117 EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRILGIPW 1176

Query: 404  GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 225
            GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL
Sbjct: 1177 GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 1236

Query: 224  PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 45
            PGELIGLLRAERAGR LDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG
Sbjct: 1237 PGELIGLLRAERAGRVLDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 1296

Query: 44   RIDWLKGLKENVVL 3
            RIDWLKGLKENVVL
Sbjct: 1297 RIDWLKGLKENVVL 1310


>ref|YP_009335237.1| RNA polymerase beta subunit (chloroplast) [Manfreda virginica]
 gb|AEX94805.1| RNA polymerase beta' subunit (chloroplast) [Manfreda virginica]
 gb|APO12295.1| RNA polymerase beta subunit (chloroplast) [Manfreda virginica]
          Length = 1384

 Score = 1064 bits (2752), Expect = 0.0
 Identities = 534/553 (96%), Positives = 539/553 (97%)
 Frame = -3

Query: 1661 IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNGK 1482
            IYVQRITP KKKYFVLVRPVVTYEIADGINL KLFPQDLLQEK+NVQLRVVNYILYGNGK
Sbjct: 762  IYVQRITPTKKKYFVLVRPVVTYEIADGINLEKLFPQDLLQEKDNVQLRVVNYILYGNGK 821

Query: 1481 SIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTISY 1302
            SIRGI HTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKSTISY
Sbjct: 822  SIRGISHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTISY 881

Query: 1301 TGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILSS 1122
            TGKRYDTAGSGLIPDNGLDRTNINPFYSK KIPLVTQHQ T+GTLLNRNKE QSLIILSS
Sbjct: 882  TGKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLVTQHQETVGTLLNRNKECQSLIILSS 941

Query: 1121 FNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLNK 942
            FNCFRVGPFNGSKYNN AKESNPITPI+ LLGPLGTIVPKIVNFYSSYHLITHNQILLNK
Sbjct: 942  FNCFRVGPFNGSKYNNAAKESNPITPIRDLLGPLGTIVPKIVNFYSSYHLITHNQILLNK 1001

Query: 941  YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETSTT 762
            YWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCNNIILNP HLNWCFLHYNYCEETST 
Sbjct: 1002 YWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCNNIILNPFHLNWCFLHYNYCEETSTI 1061

Query: 761  ISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLSE 582
            ISIGQF CENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETL E
Sbjct: 1062 ISIGQFICENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLFE 1121

Query: 581  GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPWG 402
            GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPR+LGIPWG
Sbjct: 1122 GDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRILGIPWG 1181

Query: 401  FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP 222
            FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP
Sbjct: 1182 FLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFLP 1241

Query: 221  GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 42
            GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR
Sbjct: 1242 GELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRGR 1301

Query: 41   IDWLKGLKENVVL 3
            IDWLKGLKENVVL
Sbjct: 1302 IDWLKGLKENVVL 1314


>ref|YP_009432631.1| RNA polymerase beta' subunit (chloroplast) [Hosta minor]
 gb|ATB18912.1| RNA polymerase beta' subunit (chloroplast) [Hosta minor]
          Length = 1380

 Score = 1064 bits (2751), Expect = 0.0
 Identities = 534/554 (96%), Positives = 539/554 (97%)
 Frame = -3

Query: 1664 WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 1485
            WIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+NVQLRVVNYILYGNG
Sbjct: 757  WIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKDNVQLRVVNYILYGNG 816

Query: 1484 KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTIS 1305
            KSIRGI HTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKSTIS
Sbjct: 817  KSIRGISHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTIS 876

Query: 1304 YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILS 1125
            YT KRYDTAGSGLIPDNGLDRTNINPFYSK KIPLVTQHQ T+GTLLNRNKE QSLIILS
Sbjct: 877  YTVKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLVTQHQETVGTLLNRNKECQSLIILS 936

Query: 1124 SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 945
            SFNCFRVGPFNGSKYNNVAKESNPITPI+ LLGPLGTIVPKIVNFYSSYHLITHNQILLN
Sbjct: 937  SFNCFRVGPFNGSKYNNVAKESNPITPIRDLLGPLGTIVPKIVNFYSSYHLITHNQILLN 996

Query: 944  KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 765
            KYWLL NFKQTFQVLEVLKYCLIDENRRIYNP PCNNIILNP HLNWCFLHYNYCEETST
Sbjct: 997  KYWLLANFKQTFQVLEVLKYCLIDENRRIYNPGPCNNIILNPFHLNWCFLHYNYCEETST 1056

Query: 764  TISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 585
             ISIGQF CENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETL 
Sbjct: 1057 IISIGQFICENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLF 1116

Query: 584  EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 405
            EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPR+LGIPW
Sbjct: 1117 EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRILGIPW 1176

Query: 404  GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 225
            GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL
Sbjct: 1177 GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 1236

Query: 224  PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 45
            PGELIGL RAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG
Sbjct: 1237 PGELIGLFRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 1296

Query: 44   RIDWLKGLKENVVL 3
            RIDWLKGLKENVVL
Sbjct: 1297 RIDWLKGLKENVVL 1310


>ref|YP_009432547.1| RNA polymerase beta' subunit (chloroplast) [Cordyline indivisa]
 gb|ATB18829.1| RNA polymerase beta' subunit (chloroplast) [Cordyline indivisa]
          Length = 1384

 Score = 1063 bits (2748), Expect = 0.0
 Identities = 530/554 (95%), Positives = 542/554 (97%)
 Frame = -3

Query: 1664 WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKENVQLRVVNYILYGNG 1485
            WIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+NVQLRVVNYILYGNG
Sbjct: 760  WIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKDNVQLRVVNYILYGNG 819

Query: 1484 KSIRGIYHTSIQLVRTCLVLNWDQEKNGSMEEVHASFVEVRANGLIRDFIRIELVKSTIS 1305
            KSIRGIYHTSIQLVRTCLVLNWDQEKNGS+EEVHASFVEVRAN LIRDFIRIELVKSTIS
Sbjct: 820  KSIRGIYHTSIQLVRTCLVLNWDQEKNGSIEEVHASFVEVRANDLIRDFIRIELVKSTIS 879

Query: 1304 YTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLVTQHQGTIGTLLNRNKEGQSLIILS 1125
            YTGKRYDT GSGLIPDNGLDRTNINPFYSKVKIPLV QHQ TIGTLLNRNK+ QSL ILS
Sbjct: 880  YTGKRYDTEGSGLIPDNGLDRTNINPFYSKVKIPLVIQHQRTIGTLLNRNKKCQSLRILS 939

Query: 1124 SFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLGTIVPKIVNFYSSYHLITHNQILLN 945
            SFNCFRVGPFNGSKYNNVAKESNPITPI+ LLGPLGTIVPKIVNFYSSYHLITHNQILLN
Sbjct: 940  SFNCFRVGPFNGSKYNNVAKESNPITPIRDLLGPLGTIVPKIVNFYSSYHLITHNQILLN 999

Query: 944  KYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCNNIILNPSHLNWCFLHYNYCEETST 765
            KYWLLDNFKQTFQVLEVLKYCLIDENR+IYNP+PCNNIILNP HLNWCFLH+NYCEETST
Sbjct: 1000 KYWLLDNFKQTFQVLEVLKYCLIDENRKIYNPNPCNNIILNPFHLNWCFLHHNYCEETST 1059

Query: 764  TISIGQFFCENICLFKYGPRIKKSGQILIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 585
             ISIGQFFCENICLFKYGP  K+SGQ+LIVHVDSLIIRSAKPYLATPGATVHGHYGETLS
Sbjct: 1060 IISIGQFFCENICLFKYGPHKKQSGQVLIVHVDSLIIRSAKPYLATPGATVHGHYGETLS 1119

Query: 584  EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRVLGIPW 405
            EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPR+LGIPW
Sbjct: 1120 EGDTLVTFIYEKSRSGDITQGLPKVEQILEVRSIGSISMNLERRVEGWNERIPRILGIPW 1179

Query: 404  GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQVTSKVLVSEDGMSNVFL 225
            GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIV+QVTSKVLVSEDGMSNVFL
Sbjct: 1180 GFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIVQQVTSKVLVSEDGMSNVFL 1239

Query: 224  PGELIGLLRAERAGRALDEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAALRG 45
            PGELIGLLRAERAGRALDEAICYRAILLGIT+ASLNTQSFISEASFQETARVLAKAALRG
Sbjct: 1240 PGELIGLLRAERAGRALDEAICYRAILLGITKASLNTQSFISEASFQETARVLAKAALRG 1299

Query: 44   RIDWLKGLKENVVL 3
            RIDWLKGLKENVVL
Sbjct: 1300 RIDWLKGLKENVVL 1313