BLASTX nr result
ID: Ophiopogon22_contig00033183
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ophiopogon22_contig00033183 (1016 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis] 67 2e-08 gb|ONK76793.1| uncharacterized protein A4U43_C03F32200 [Asparagu... 64 8e-08 gb|ONK80596.1| uncharacterized protein A4U43_C01F19590 [Asparagu... 60 3e-06 >gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis] Length = 926 Score = 67.0 bits (162), Expect = 2e-08 Identities = 40/102 (39%), Positives = 53/102 (51%) Frame = +3 Query: 690 TQQRNRGSPARDATQVRPMDLRDRLNRKRSIDQVTPRCHCERLISAVLSDCHCGIQAARP 869 TQ++ SP ++ +V DLR+ L+R++ + CHCERLIS VLS+CHC I R Sbjct: 254 TQEQGVSSPMKNCPRVS--DLRELLSREKPTQRAAHPCHCERLISTVLSECHCCISEPRR 311 Query: 870 SVFDRLSAVKAHDXXXXXXXXXXXXXXXXYPAVISNTTSAGR 995 SVFDRL+ V YP V N TS G+ Sbjct: 312 SVFDRLTDVA---RPTKRRRQKKKVSEVEYPQVTINMTSRGK 350 >gb|ONK76793.1| uncharacterized protein A4U43_C03F32200 [Asparagus officinalis] Length = 351 Score = 64.3 bits (155), Expect = 8e-08 Identities = 30/48 (62%), Positives = 37/48 (77%) Frame = +3 Query: 747 DLRDRLNRKRSIDQVTPRCHCERLISAVLSDCHCGIQAARPSVFDRLS 890 DLR+ L RKR+I + P+CHCERLI VL+DC C I A+PSVF+RLS Sbjct: 301 DLREYLTRKRTIHKANPQCHCERLIHTVLADCQC-IGTAKPSVFERLS 347 >gb|ONK80596.1| uncharacterized protein A4U43_C01F19590 [Asparagus officinalis] Length = 409 Score = 59.7 bits (143), Expect = 3e-06 Identities = 28/51 (54%), Positives = 36/51 (70%) Frame = +3 Query: 738 RPMDLRDRLNRKRSIDQVTPRCHCERLISAVLSDCHCGIQAARPSVFDRLS 890 R DLR+ L KR+I + P+C CERLI VL+DC C + A+PSVF+RLS Sbjct: 204 RKEDLREYLTPKRTISEANPQCQCERLIHTVLADCQC-VGTAKPSVFERLS 253