BLASTX nr result

ID: Ophiopogon22_contig00033183 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00033183
         (1016 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]     67   2e-08
gb|ONK76793.1| uncharacterized protein A4U43_C03F32200 [Asparagu...    64   8e-08
gb|ONK80596.1| uncharacterized protein A4U43_C01F19590 [Asparagu...    60   3e-06

>gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 926

 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 40/102 (39%), Positives = 53/102 (51%)
 Frame = +3

Query: 690 TQQRNRGSPARDATQVRPMDLRDRLNRKRSIDQVTPRCHCERLISAVLSDCHCGIQAARP 869
           TQ++   SP ++  +V   DLR+ L+R++   +    CHCERLIS VLS+CHC I   R 
Sbjct: 254 TQEQGVSSPMKNCPRVS--DLRELLSREKPTQRAAHPCHCERLISTVLSECHCCISEPRR 311

Query: 870 SVFDRLSAVKAHDXXXXXXXXXXXXXXXXYPAVISNTTSAGR 995
           SVFDRL+ V                    YP V  N TS G+
Sbjct: 312 SVFDRLTDVA---RPTKRRRQKKKVSEVEYPQVTINMTSRGK 350


>gb|ONK76793.1| uncharacterized protein A4U43_C03F32200 [Asparagus officinalis]
          Length = 351

 Score = 64.3 bits (155), Expect = 8e-08
 Identities = 30/48 (62%), Positives = 37/48 (77%)
 Frame = +3

Query: 747 DLRDRLNRKRSIDQVTPRCHCERLISAVLSDCHCGIQAARPSVFDRLS 890
           DLR+ L RKR+I +  P+CHCERLI  VL+DC C I  A+PSVF+RLS
Sbjct: 301 DLREYLTRKRTIHKANPQCHCERLIHTVLADCQC-IGTAKPSVFERLS 347


>gb|ONK80596.1| uncharacterized protein A4U43_C01F19590 [Asparagus officinalis]
          Length = 409

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = +3

Query: 738 RPMDLRDRLNRKRSIDQVTPRCHCERLISAVLSDCHCGIQAARPSVFDRLS 890
           R  DLR+ L  KR+I +  P+C CERLI  VL+DC C +  A+PSVF+RLS
Sbjct: 204 RKEDLREYLTPKRTISEANPQCQCERLIHTVLADCQC-VGTAKPSVFERLS 253


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