BLASTX nr result
ID: Ophiopogon22_contig00033123
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00033123
(929 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020269097.1| probable RNA-dependent RNA polymerase 1 [Asp... 453 e-148
ref|XP_020089659.1| probable RNA-dependent RNA polymerase 1 [Ana... 355 e-110
gb|OAY79234.1| RNA-dependent RNA polymerase 1, partial [Ananas c... 356 e-108
ref|XP_020089658.1| probable RNA-dependent RNA polymerase 1 isof... 347 e-107
ref|XP_020089657.1| probable RNA-dependent RNA polymerase 1 isof... 347 e-107
ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polyme... 343 e-106
ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polyme... 340 e-105
ref|XP_020090854.1| probable RNA-dependent RNA polymerase 1 [Ana... 328 e-100
ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polyme... 317 2e-96
ref|XP_020584591.1| probable RNA-dependent RNA polymerase 1 isof... 310 1e-93
ref|XP_020170071.1| probable RNA-dependent RNA polymerase 1 [Aeg... 308 3e-93
gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indi... 306 1e-92
ref|XP_020675734.1| probable RNA-dependent RNA polymerase 1 isof... 304 1e-91
gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare] 303 3e-91
gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japo... 301 3e-91
ref|XP_015627028.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 301 9e-91
gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare su... 301 1e-90
ref|XP_010236147.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 301 1e-90
ref|XP_010917518.1| PREDICTED: probable RNA-dependent RNA polyme... 299 6e-90
ref|XP_020584589.1| probable RNA-dependent RNA polymerase 1 isof... 299 1e-89
>ref|XP_020269097.1| probable RNA-dependent RNA polymerase 1 [Asparagus officinalis]
ref|XP_020269098.1| probable RNA-dependent RNA polymerase 1 [Asparagus officinalis]
gb|ONK67125.1| uncharacterized protein A4U43_C06F15970 [Asparagus officinalis]
Length = 1128
Score = 453 bits (1166), Expect = e-148
Identities = 217/311 (69%), Positives = 259/311 (83%), Gaps = 2/311 (0%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYNALNEMPQQYFYPK 749
KNFLE+YTG+GSVFAVKVR+PK ++T+S+A+A+VQF TSKDA + + Q + Y
Sbjct: 21 KNFLEDYTGEGSVFAVKVRHPKVISTRSRAYALVQFFTSKDAKIVSSLAQ---QNFLYGN 77
Query: 748 TYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKIS 569
+YLKV+Y RDIVPKPRK+ F+LED LH+GCLISE TLGVLWSCT VEVHFGF+MKKIS
Sbjct: 78 SYLKVEYAKRDIVPKPRKAWFILEDTELHIGCLISENTLGVLWSCTGVEVHFGFNMKKIS 137
Query: 568 FFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYE--MPLQDSKIIHE 395
F L QG+QS+KLELS+ESIWDIQQ ++ SQFLV+QV+AAPRI+E +PLQ+S ++HE
Sbjct: 138 FLLTQGSQSHKLELSFESIWDIQQHSLPSENSQFLVVQVQAAPRIFEAPVPLQNSALVHE 197
Query: 394 DPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHF 215
DPSLNY+KE QDDQWIRTTDFTP CSIGQSFA+CLELPY C LPDF F Y+KKV HF
Sbjct: 198 DPSLNYYKELQDDQWIRTTDFTPLCSIGQSFALCLELPYGCRLPDFHD-FLYFKKVVSHF 256
Query: 214 SLRNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPCR 35
+L+ T SYS + +LVPI+EPWNA EIPYK LFK+NT+VQNGTLMGPTLND+FF +ISP R
Sbjct: 257 NLKRTHSYSRNSDLVPIIEPWNAIEIPYKFLFKINTLVQNGTLMGPTLNDEFFRYISPLR 316
Query: 34 VPINFIEYALG 2
PI FIEYALG
Sbjct: 317 YPIGFIEYALG 327
>ref|XP_020089659.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
ref|XP_020089661.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
Length = 1133
Score = 355 bits (910), Expect = e-110
Identities = 174/309 (56%), Positives = 230/309 (74%), Gaps = 1/309 (0%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTI-YNALNEMPQQYFYP 752
KN LE + DGSV+A+K+R PK T KS+++A+VQFLT A I Y A N + + Y
Sbjct: 21 KNILEGFISDGSVYALKLRQPKVTTGKSRSYAVVQFLTEGQAKQIIYLADNSLLRCQGY- 79
Query: 751 KTYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKI 572
YLK +YM RDIVPKPR SLFV+E A LH GC +S+ + VLWS +DV V+FGF+++KI
Sbjct: 80 --YLKARYMERDIVPKPRSSLFVVERATLHFGCPVSKRSFCVLWSASDVHVNFGFNLRKI 137
Query: 571 SFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIHED 392
FFL +G+ YKLELSYESIW+IQ S Q SQFL+ Q+ AAP+IYE+PL+ S ++ ED
Sbjct: 138 YFFLSKGSFEYKLELSYESIWEIQLHRSSDQGSQFLLFQMAAAPKIYELPLRSSSLVQED 197
Query: 391 PSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHFS 212
P LNYFKET DD+WIR+TDF+PSCS+GQS ICL+LPY+ LP+ R+YF +Y++ GH+
Sbjct: 198 PLLNYFKETPDDKWIRSTDFSPSCSMGQSSVICLQLPYDYELPNIREYFVFYEEFNGHYE 257
Query: 211 LRNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPCRV 32
L SYS ++ELVPIVEP ++PY ILFK+N MVQNGT+ GPTL+D+FF +SP V
Sbjct: 258 LNRGSSYSCNVELVPIVEPHPLIQVPYNILFKINQMVQNGTISGPTLDDEFFRLVSPYLV 317
Query: 31 PINFIEYAL 5
P+++I +A+
Sbjct: 318 PVDYIVHAI 326
>gb|OAY79234.1| RNA-dependent RNA polymerase 1, partial [Ananas comosus]
Length = 3431
Score = 356 bits (914), Expect = e-108
Identities = 175/309 (56%), Positives = 231/309 (74%), Gaps = 1/309 (0%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTI-YNALNEMPQQYFYP 752
KN LE + GDGS++A+K+R PK T KSK++A+VQFLT A I Y A N + + Y
Sbjct: 2301 KNILEGFIGDGSIYALKLRQPKVTTGKSKSYAVVQFLTEGQAKQIIYLADNCLLRCQGY- 2359
Query: 751 KTYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKI 572
YLK +YM RDIVPKPR SLFV+E A LH GC +S+ + VLWS +DV V+FGF+++KI
Sbjct: 2360 --YLKARYMERDIVPKPRSSLFVVERATLHFGCPVSKRSFCVLWSASDVHVNFGFNLRKI 2417
Query: 571 SFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIHED 392
FFL +G+ YKLELSYESIW+IQ S Q SQFL+ Q+ AAP+IYE+PL+ S ++ ED
Sbjct: 2418 YFFLSKGSFEYKLELSYESIWEIQLHRSSDQGSQFLLFQMAAAPKIYELPLRSSSLVQED 2477
Query: 391 PSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHFS 212
P LNYFKET DD+WIR+TDF+PSCS+GQS ICL+LPY+ LP+ R+YF +Y++ GH+
Sbjct: 2478 PLLNYFKETPDDKWIRSTDFSPSCSMGQSSVICLQLPYDYELPNIREYFVFYEEFNGHYE 2537
Query: 211 LRNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPCRV 32
L SYS ++ELVPIVEP ++PY ILFK+N MVQNGT+ GPTL+D+FF +SP V
Sbjct: 2538 LNRGSSYSCNVELVPIVEPHPLIQVPYNILFKINQMVQNGTISGPTLDDEFFRLVSPYLV 2597
Query: 31 PINFIEYAL 5
P+++I +A+
Sbjct: 2598 PVDYIVHAI 2606
Score = 337 bits (863), Expect = e-101
Identities = 167/312 (53%), Positives = 227/312 (72%), Gaps = 5/312 (1%)
Frame = -2
Query: 925 NFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTI-YNALNEMPQQYFYPK 749
+ LE + GDGSV+A+K+R P T KS+++A+VQFLT A I Y A N + + Y
Sbjct: 1170 DILEGFIGDGSVYALKLRQPAVTTQKSRSYAVVQFLTEGQAKQIIYLADNSLLRCQGY-- 1227
Query: 748 TYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKIS 569
YLK +YM RDIVPKPR SLFV+E A LH GC + + + VLWS +DV V+FGF+++KI
Sbjct: 1228 -YLKARYMKRDIVPKPRASLFVVEHATLHFGCPVLKRSFCVLWSASDVRVNFGFNLRKIY 1286
Query: 568 FFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQF----LVIQVEAAPRIYEMPLQDSKII 401
FF+ +G+ YKLELSYESIW+IQ S Q + F + +Q+ AAP+IYE+ L+ S ++
Sbjct: 1287 FFVSKGSFEYKLELSYESIWEIQLHRSSDQETDFQFWFMKLQMAAAPKIYELALRSSGLV 1346
Query: 400 HEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAG 221
HEDP LNYFKET DDQWIR+TDF+PSCS+GQS ICL+LPY+ LP+ +YF +Y++ G
Sbjct: 1347 HEDPLLNYFKETPDDQWIRSTDFSPSCSMGQSSVICLQLPYDYELPNISEYFLFYEEFDG 1406
Query: 220 HFSLRNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISP 41
H+ L + SYS ++ELVPIVEP ++PYKILFK+N MVQNGT+ GPTL+D+FF +SP
Sbjct: 1407 HYELNSGSSYSCNMELVPIVEPHPLIQVPYKILFKINQMVQNGTISGPTLDDEFFRLVSP 1466
Query: 40 CRVPINFIEYAL 5
V +++I +A+
Sbjct: 1467 YLVSVDYIIHAI 1478
Score = 324 bits (830), Expect = 3e-97
Identities = 163/306 (53%), Positives = 214/306 (69%), Gaps = 1/306 (0%)
Frame = -2
Query: 919 LENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYN-ALNEMPQQYFYPKTY 743
LE + G GSV+A+++R P T KS+A+A VQF+ A I N A N + + Y Y
Sbjct: 61 LEGFIGGGSVYALQLRQPIVTTRKSEAYASVQFVREWQAELIVNMADNRLLRCQGY---Y 117
Query: 742 LKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKISFF 563
L QYM RDIVPKPR SLFV+E +H GC +S+ + VLWS DV V FGF+++K+ F
Sbjct: 118 LMAQYMERDIVPKPRSSLFVVERTIVHFGCPVSKRSFCVLWSAYDVHVTFGFNLRKLYLF 177
Query: 562 LVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIHEDPSL 383
YKLELSYESIW+IQ S Q SQFL+IQ+ AAP+IYE+PL S ++H+DP L
Sbjct: 178 FSMRGLEYKLELSYESIWEIQLHRSSYQGSQFLLIQMAAAPKIYELPLCSSGLVHKDPFL 237
Query: 382 NYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHFSLRN 203
NYFKET DDQWIR+TDF+PSCS+GQS ICL+LPY+ LP+ +YF +Y++ GH+ L
Sbjct: 238 NYFKETPDDQWIRSTDFSPSCSMGQSSVICLQLPYDYELPNIHEYFVFYEEFNGHYELNR 297
Query: 202 TGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPCRVPIN 23
SYS ++ELVPIVEP +PYKILFK+N MVQNG + GPTL+D+FF + P VP++
Sbjct: 298 GYSYSCNMELVPIVEPHPWIHVPYKILFKINQMVQNGIISGPTLDDEFFRLVCPYLVPVD 357
Query: 22 FIEYAL 5
+I +A+
Sbjct: 358 YIVHAI 363
>ref|XP_020089658.1| probable RNA-dependent RNA polymerase 1 isoform X2 [Ananas comosus]
Length = 1133
Score = 347 bits (889), Expect = e-107
Identities = 172/309 (55%), Positives = 226/309 (73%), Gaps = 1/309 (0%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTI-YNALNEMPQQYFYP 752
K+ LE + GDGSV+A+K+R P T KS+++A+VQFLT A I Y A N + Y
Sbjct: 21 KDILEGFIGDGSVYALKLRQPAVTTQKSRSYAVVQFLTEGQAKRIIYLADNSLLMCQGY- 79
Query: 751 KTYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKI 572
YLKV+YM RDIVPKPR SLFV+E A LH GC + + + VLWS +DV V+FGF+++KI
Sbjct: 80 --YLKVRYMKRDIVPKPRASLFVVEHATLHFGCPVLKRSFCVLWSASDVRVNFGFNLRKI 137
Query: 571 SFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIHED 392
FF+ QG+ YKLELSYESIW+IQ S Q SQFL+ Q+ AAP+IYE+ L+ S ++HED
Sbjct: 138 YFFVSQGSFKYKLELSYESIWEIQLHRSSDQGSQFLLFQMAAAPKIYELALRSSGLVHED 197
Query: 391 PSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHFS 212
P LNYFKET DDQWIR+TDF+PSCS+GQS ICL+LPY+ LP+ +YF +Y++ GH+
Sbjct: 198 PLLNYFKETPDDQWIRSTDFSPSCSMGQSSVICLQLPYDYELPNIHEYFVFYEEFNGHYE 257
Query: 211 LRNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPCRV 32
L SYS ++ELVPIVEP +PYKILFK+N MVQNG + GPTL+D+FF + P V
Sbjct: 258 LNGGYSYSCNMELVPIVEPHPWIHVPYKILFKINQMVQNGIISGPTLDDEFFRLVCPYLV 317
Query: 31 PINFIEYAL 5
P+++I +A+
Sbjct: 318 PVDYIVHAI 326
>ref|XP_020089657.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Ananas comosus]
Length = 1147
Score = 347 bits (889), Expect = e-107
Identities = 172/309 (55%), Positives = 226/309 (73%), Gaps = 1/309 (0%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTI-YNALNEMPQQYFYP 752
K+ LE + GDGSV+A+K+R P T KS+++A+VQFLT A I Y A N + Y
Sbjct: 35 KDILEGFIGDGSVYALKLRQPAVTTQKSRSYAVVQFLTEGQAKRIIYLADNSLLMCQGY- 93
Query: 751 KTYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKI 572
YLKV+YM RDIVPKPR SLFV+E A LH GC + + + VLWS +DV V+FGF+++KI
Sbjct: 94 --YLKVRYMKRDIVPKPRASLFVVEHATLHFGCPVLKRSFCVLWSASDVRVNFGFNLRKI 151
Query: 571 SFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIHED 392
FF+ QG+ YKLELSYESIW+IQ S Q SQFL+ Q+ AAP+IYE+ L+ S ++HED
Sbjct: 152 YFFVSQGSFKYKLELSYESIWEIQLHRSSDQGSQFLLFQMAAAPKIYELALRSSGLVHED 211
Query: 391 PSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHFS 212
P LNYFKET DDQWIR+TDF+PSCS+GQS ICL+LPY+ LP+ +YF +Y++ GH+
Sbjct: 212 PLLNYFKETPDDQWIRSTDFSPSCSMGQSSVICLQLPYDYELPNIHEYFVFYEEFNGHYE 271
Query: 211 LRNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPCRV 32
L SYS ++ELVPIVEP +PYKILFK+N MVQNG + GPTL+D+FF + P V
Sbjct: 272 LNGGYSYSCNMELVPIVEPHPWIHVPYKILFKINQMVQNGIISGPTLDDEFFRLVCPYLV 331
Query: 31 PINFIEYAL 5
P+++I +A+
Sbjct: 332 PVDYIVHAI 340
>ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix
dactylifera]
ref|XP_008812978.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix
dactylifera]
Length = 1131
Score = 343 bits (879), Expect = e-106
Identities = 171/308 (55%), Positives = 222/308 (72%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYNALNEMPQQYFYPK 749
K FLE +TG G+++A+K R PK VT KS+A+A+VQF+ +K A +I + +
Sbjct: 21 KEFLEVHTGKGTIYALKFRLPKYVTAKSRAYAIVQFIANKHAESI-----ACKRLVWVDG 75
Query: 748 TYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKIS 569
LKV++M RDIVPKPR SLFVLE+ +H G +S+ VLWS DV V+FGF M+KI
Sbjct: 76 FVLKVRHMERDIVPKPRTSLFVLENTTVHFGSPVSQNKFSVLWSPKDVRVNFGFSMRKIY 135
Query: 568 FFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIHEDP 389
FFLVQG+ SYK EL+YESIW+IQ S + QFL+IQV AAP++YE+ L++S ++HEDP
Sbjct: 136 FFLVQGSHSYKFELAYESIWEIQLHHSSTKYLQFLLIQVVAAPKVYELSLRNSGLLHEDP 195
Query: 388 SLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHFSL 209
NYFK+ DDQW+RTTDF+P CSIGQS A+CL+L Y+C LP+ R YF +YK+ G F L
Sbjct: 196 EYNYFKDLPDDQWVRTTDFSPLCSIGQSSALCLQLSYDCDLPNIRDYFPFYKEFEGRFDL 255
Query: 208 RNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPCRVP 29
SYS SL+LVPIVEP E+PYKILFK+N MVQNGTL GPTL+ KFF +SP +
Sbjct: 256 ERGSSYSRSLDLVPIVEPRPRIEVPYKILFKINHMVQNGTLFGPTLDGKFFGLVSPQFIR 315
Query: 28 INFIEYAL 5
I++IE A+
Sbjct: 316 IDYIECAI 323
>ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
[Elaeis guineensis]
ref|XP_019704927.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
[Elaeis guineensis]
ref|XP_019704928.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
[Elaeis guineensis]
Length = 1129
Score = 340 bits (873), Expect = e-105
Identities = 172/308 (55%), Positives = 224/308 (72%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYNALNEMPQQYFYPK 749
K FLE +TG+G++FA+K R PK VT KS+A+A+VQF T++ A +I + +Y
Sbjct: 21 KAFLEVHTGEGTIFALKFRLPKYVTAKSRAYAIVQFTTNRHAESIAHK-----HLVWYDG 75
Query: 748 TYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKIS 569
LKV+ + RDIVPKPR SLF+LE+A LH G +S+ VLWS DV+V+FGF+++KI
Sbjct: 76 FVLKVRDVERDIVPKPRTSLFILENATLHFGSPVSQNKFSVLWSAMDVKVNFGFNLRKIY 135
Query: 568 FFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIHEDP 389
FFL +G SYK EL+YESIW+IQ S Q QFL+IQV AAP+IYE+ ++S ++ EDP
Sbjct: 136 FFLSRGGHSYKFELAYESIWEIQLHRSSTQHLQFLLIQVVAAPKIYELFPRNSGLLLEDP 195
Query: 388 SLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHFSL 209
NYFK+ DDQW+RTTDF+P CSIGQS A+CL+L Y+C LP+ R YF +YK+ GHF L
Sbjct: 196 IYNYFKDPPDDQWVRTTDFSPLCSIGQSSALCLQLSYDCDLPNIRDYFVFYKESEGHFDL 255
Query: 208 RNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPCRVP 29
SYS SL+LVPIVEP E+PYKILFK+N MVQNGTL GPTL++KFF +SP V
Sbjct: 256 ERGISYSCSLDLVPIVEPRPRIEVPYKILFKINHMVQNGTLFGPTLDEKFFRLVSPQYVR 315
Query: 28 INFIEYAL 5
I++IE A+
Sbjct: 316 IDYIECAI 323
>ref|XP_020090854.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
ref|XP_020090855.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
ref|XP_020090856.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
Length = 1133
Score = 328 bits (840), Expect = e-100
Identities = 165/309 (53%), Positives = 216/309 (69%), Gaps = 1/309 (0%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYN-ALNEMPQQYFYP 752
K LE + G SV+A+++R P T KS+A+A VQF+T A I N A N + + Y
Sbjct: 21 KKVLEGFIGGESVYALQLRQPIVTTRKSEAYASVQFVTEWQAELIVNMADNRLLRCQGY- 79
Query: 751 KTYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKI 572
YL QYM RDIVPKPR SLFV+E +H GC +S+ + VLWS DV V FGF+++K+
Sbjct: 80 --YLMAQYMERDIVPKPRSSLFVVERTIVHFGCPVSKRSFCVLWSAYDVHVTFGFNLRKL 137
Query: 571 SFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIHED 392
F G YKLELSYESIW+IQ S Q SQFL+IQ+ AAP+IYE+PL S ++H+D
Sbjct: 138 YLFFSMGGLEYKLELSYESIWEIQLHRSSYQGSQFLLIQMAAAPKIYELPLCSSGLVHKD 197
Query: 391 PSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHFS 212
P LNYFKET DDQWIR+TDF+PSCS+GQS ICL+LPY+ LP+ +YF +Y++ GH+
Sbjct: 198 PFLNYFKETPDDQWIRSTDFSPSCSMGQSSVICLQLPYDYELPNIHEYFVFYEEFNGHYE 257
Query: 211 LRNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPCRV 32
L SYS ++ELVPIVEP +PYKILFK+N MVQNG + GPTL+D+FF + P V
Sbjct: 258 LNGGYSYSCNMELVPIVEPHPWIHVPYKILFKINQMVQNGIISGPTLDDEFFRLVCPYLV 317
Query: 31 PINFIEYAL 5
P+++I +A+
Sbjct: 318 PVDYIVHAI 326
>ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Musa acuminata
subsp. malaccensis]
Length = 1134
Score = 317 bits (813), Expect = 2e-96
Identities = 162/307 (52%), Positives = 215/307 (70%), Gaps = 1/307 (0%)
Frame = -2
Query: 922 FLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYNALNEMPQQYFYPKTY 743
FLE YTG+GSV A+K+R K T +A+VQF +D ++ + + + Y Y
Sbjct: 23 FLEKYTGEGSVIALKLRPSKNSTV----YAIVQFPRREDVQDLFVMIQQ--GKLSYDGHY 76
Query: 742 LKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKISFF 563
L V+ M RDI+PKPRK LFVLE+ LH GC +S+ L VL S DV+V+FGF+M+KI F
Sbjct: 77 LTVRNMERDIIPKPRKPLFVLENVTLHFGCPLSQKRLSVLRSMEDVKVNFGFEMRKIYFL 136
Query: 562 LVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIHEDPSL 383
L G SYKLEL+YESIW+I+ S Q SQFLV+QV AAP+IYE P +++ ++EDP L
Sbjct: 137 LSHGIHSYKLELAYESIWEIRLHRSSVQNSQFLVVQVVAAPKIYETPSRNTGSLYEDPRL 196
Query: 382 NYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHFSLRN 203
NYF++ DDQW+RTTDFT S SIGQS A+CL+LP+ C LP+ R+YF ++ +V GH+ L
Sbjct: 197 NYFRDLPDDQWVRTTDFTSSRSIGQSCALCLQLPFECSLPNIREYFVHFIEVDGHYDLER 256
Query: 202 TGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPC-RVPI 26
SYS +L+LVPIVEP ++ YKILFK+N MVQNGTL+GPTL+ KF+ + PC +P
Sbjct: 257 GYSYSRNLDLVPIVEPHTGIQVSYKILFKINHMVQNGTLIGPTLDRKFYTLVCPCPSIPT 316
Query: 25 NFIEYAL 5
+IE AL
Sbjct: 317 EYIERAL 323
>ref|XP_020584591.1| probable RNA-dependent RNA polymerase 1 isoform X2 [Phalaenopsis
equestris]
Length = 1140
Score = 310 bits (793), Expect = 1e-93
Identities = 157/308 (50%), Positives = 211/308 (68%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYNALNEMPQQYFYPK 749
K LE YTG+GSVFAVK+R+PK + + SKAFA+VQF++S A + + Q+ + K
Sbjct: 31 KECLEYYTGEGSVFAVKLRHPKVIKSTSKAFAIVQFISSTGATKVKYMTRQ--QRLCFEK 88
Query: 748 TYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKIS 569
+YL + + RDIVPKP + V+ED +H GC ISE L +LW+ D + FGF+++KIS
Sbjct: 89 SYLTSRDVERDIVPKPITASHVMEDVIVHFGCQISEKKLYILWTARDARIEFGFNLRKIS 148
Query: 568 FFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIHEDP 389
F + YKLELSYESIW+IQ AQR +FL IQV+AAP++Y MP Q+S I+E+P
Sbjct: 149 LFTSWEDCLYKLELSYESIWEIQLYHSVAQRCRFLQIQVQAAPKLYMMPSQNSFAIYENP 208
Query: 388 SLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHFSL 209
+LNY+K + D+QW+RTTDFTP CSIGQS ICL+LP LP+ ++ F Y+K+V + L
Sbjct: 209 ALNYYKHSTDEQWLRTTDFTPQCSIGQSSTICLQLPIKSDLPNIKENFVYFKEVDAYLDL 268
Query: 208 RNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPCRVP 29
N SYS LVPIV P N ++PYKILFK+N +VQNG L GPTL++ FF ++P
Sbjct: 269 VNGRSYSYDFHLVPIVSPPNGFKVPYKILFKINHLVQNGILSGPTLDETFFSLLNPFSKS 328
Query: 28 INFIEYAL 5
I+ IE AL
Sbjct: 329 IDLIERAL 336
>ref|XP_020170071.1| probable RNA-dependent RNA polymerase 1 [Aegilops tauschii subsp.
tauschii]
ref|XP_020170072.1| probable RNA-dependent RNA polymerase 1 [Aegilops tauschii subsp.
tauschii]
Length = 1116
Score = 308 bits (790), Expect = 3e-93
Identities = 152/308 (49%), Positives = 212/308 (68%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYNALNEMPQQYFYPK 749
K+ LE G G+VFA+K+R PK ++ SK+FA+VQF + A+ + NA +
Sbjct: 21 KDLLEQIVGTGNVFAIKLRPPKNISANSKSFAIVQFQSEAHASLVLNAARRNALRS--GS 78
Query: 748 TYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKIS 569
+LK +Y RDIVP+PR ++F L+DA LH GCL+ E L VLWS T+V V FGF MK+I
Sbjct: 79 NHLKARYAERDIVPRPRTTIFNLQDATLHFGCLLREKALSVLWSGTNVSVEFGFAMKRID 138
Query: 568 FFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIHEDP 389
F L+ ++ YKLELSYESIW+IQ P + +FL+IQV+AAP+IYE ++ S +++DP
Sbjct: 139 FCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQAAPKIYEQNIRRSGSMYDDP 198
Query: 388 SLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHFSL 209
NYF++ DDQW RTTDFTPS SIGQS+ +CLELP+ C+LP+ R+YF YY+ F L
Sbjct: 199 LFNYFRDDTDDQWTRTTDFTPSASIGQSYILCLELPHICYLPNIREYFVYYEVHDDVFHL 258
Query: 208 RNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPCRVP 29
+ SYS + VP+V+ + +++PY+ILFK+N +VQNGTL GPTL+D F+ +SP
Sbjct: 259 QRGHSYSSNTCFVPVVKSHHFTDVPYEILFKINHLVQNGTLSGPTLDDNFYRLVSPGYEC 318
Query: 28 INFIEYAL 5
I+ I+ AL
Sbjct: 319 IDHIKRAL 326
>gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indica Group]
Length = 1067
Score = 306 bits (783), Expect = 1e-92
Identities = 161/312 (51%), Positives = 213/312 (68%), Gaps = 4/312 (1%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYNALN-EMPQQYFYP 752
K+ LE G G+V+AVK+R+PK VT S+A+A+VQF T + A+ + NA ++ ++ Y
Sbjct: 21 KDLLERIVGCGNVYAVKLRHPKNVTATSRAYAIVQFQTEEHASLVKNAAQRKILRRGHY- 79
Query: 751 KTYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKI 572
YLKV RDIVP+PR S+F LED LH GCL+ E L LWS T V V FGF++KKI
Sbjct: 80 --YLKVHPSDRDIVPRPRVSMFKLEDVTLHFGCLLKETILSALWSRTGVSVEFGFNLKKI 137
Query: 571 SFFLVQGNQS--YKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIH 398
F+L N S YKLELSYESIW+IQ + P +++FL+IQV+AAP+IYE + S +++
Sbjct: 138 YFYLQLPNSSIEYKLELSYESIWEIQLQRPPKSQTKFLLIQVQAAPKIYEQTPRRSGVMY 197
Query: 397 EDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGH 218
EDP NYF++ DDQW RTTDFT S SIGQS+ +CLE+P C LP+ R YFFYY +
Sbjct: 198 EDPLFNYFRDHTDDQWTRTTDFTSSSSIGQSYILCLEVPRRCDLPNIRDYFFYYHEYNHD 257
Query: 217 FSLRNTG-SYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISP 41
F R+ G YS VPIV+ + +PY+ILFK+N +VQNGTL GPT++D FF +SP
Sbjct: 258 FECRSGGYPYSSDTRFVPIVK--SRGYVPYEILFKINHLVQNGTLSGPTVDDSFFRLVSP 315
Query: 40 CRVPINFIEYAL 5
VPI+ I+ AL
Sbjct: 316 AFVPIDHIKRAL 327
>ref|XP_020675734.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Dendrobium
catenatum]
Length = 1145
Score = 304 bits (779), Expect = 1e-91
Identities = 155/306 (50%), Positives = 206/306 (67%)
Frame = -2
Query: 922 FLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYNALNEMPQQYFYPKTY 743
FLE +TG+GSVFA+K+R+PK + SKAFA+VQF++S A I N + ++ ++ Y
Sbjct: 33 FLEKFTGEGSVFALKLRHPKIIKATSKAFAIVQFVSSAGAIDIKNMI--CLRRLWFQGYY 90
Query: 742 LKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKISFF 563
L + + DIVPKP S V+ED +H GC I+E L +LW+ DV + FGF+++KI F
Sbjct: 91 LTSKDVDHDIVPKPSTSSHVMEDVIVHFGCQIAENKLYILWTVKDVRIEFGFNLRKICLF 150
Query: 562 LVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIHEDPSL 383
+ + YKLEL YESIW+IQ QR QFL IQV+AAP++Y MP Q+S +HE P
Sbjct: 151 ISYKDCLYKLELFYESIWEIQLCHSVTQRCQFLQIQVQAAPKVYVMPPQNSYAMHEGPDF 210
Query: 382 NYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHFSLRN 203
NYFK + DDQWIRTTDFTPSCSIGQS ICL+LPY LP+ + F Y+++ H L
Sbjct: 211 NYFKHSTDDQWIRTTDFTPSCSIGQSSTICLQLPYQYDLPNIKDNFVYFREDYCHLDLVK 270
Query: 202 TGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPCRVPIN 23
SYS L LVPIV P + +PYKILFK+N +VQNGTL+GPTL++ FF ++P V +
Sbjct: 271 GSSYSYDLGLVPIVRPPHGFRVPYKILFKINHLVQNGTLIGPTLDENFFKLVNPSSVDND 330
Query: 22 FIEYAL 5
+E AL
Sbjct: 331 LVERAL 336
>gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare]
Length = 1115
Score = 303 bits (776), Expect = 3e-91
Identities = 152/308 (49%), Positives = 211/308 (68%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYNALNEMPQQYFYPK 749
K+ LE G G+VFAVK+R PK ++ S++FA+VQF + A+ + NA +
Sbjct: 21 KDLLEQIVGTGNVFAVKLRPPKNISANSRSFAIVQFQSEAHASLVLNAAQRNALRS--GS 78
Query: 748 TYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKIS 569
YLK +Y RDIVP+PR ++F L+ A LH GCL+ E L VLWS T+V V FGF MK+I
Sbjct: 79 HYLKARYAERDIVPRPRTTIFNLQGAKLHFGCLLKERVLSVLWSGTNVSVEFGFAMKRID 138
Query: 568 FFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIHEDP 389
F L+ ++ YKLELSYESIW+IQ P + +FL+IQV+AAP+IYE ++ S +++DP
Sbjct: 139 FCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQAAPKIYEQNIRLSGSMYDDP 198
Query: 388 SLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHFSL 209
NYF++ DDQW RTTDFTPS SIGQS+ +CLELP+ C+LP+ R+YF YY+ F+L
Sbjct: 199 LFNYFRDDTDDQWTRTTDFTPSASIGQSYILCLELPHICYLPNIREYFVYYEVHNDIFNL 258
Query: 208 RNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPCRVP 29
+ SYS + VP+V+ +++PY+ILFK+N +VQNGTL GPTL+D F+ +SP
Sbjct: 259 QPGYSYSSNTCFVPVVKSHYFTDVPYEILFKINHLVQNGTLSGPTLDDNFYRLVSPGYER 318
Query: 28 INFIEYAL 5
I+ I+ AL
Sbjct: 319 IDRIKRAL 326
>gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japonica Group]
Length = 1027
Score = 301 bits (772), Expect = 3e-91
Identities = 159/312 (50%), Positives = 212/312 (67%), Gaps = 4/312 (1%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYNALN-EMPQQYFYP 752
K+ LE G G+V+AVK+R+PK VT S+A+A+VQF T + A+ + NA ++ ++ Y
Sbjct: 21 KDLLERIVGCGNVYAVKLRHPKNVTATSRAYAIVQFQTEEHASLVKNAAQRKILRRGHY- 79
Query: 751 KTYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKI 572
YLKV RDIVP+PR S+F LED LH GCL+ E L LWS V V FGF++KKI
Sbjct: 80 --YLKVHPSDRDIVPRPRVSMFKLEDVTLHFGCLLKETILSALWSRKGVSVEFGFNLKKI 137
Query: 571 SFFLVQGNQS--YKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIH 398
F+L N S YKLELS+ESIW+IQ + P +++FL+IQV+AAP+IYE + S +++
Sbjct: 138 YFYLQLPNSSIEYKLELSHESIWEIQLQRPPKSQTKFLLIQVQAAPKIYEQTPRRSGVMY 197
Query: 397 EDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGH 218
EDP NYF++ DDQW RTTDFT S SIGQS+ +CLE+P C LP+ R YFFYY +
Sbjct: 198 EDPLFNYFRDHTDDQWTRTTDFTSSSSIGQSYILCLEVPRRCDLPNIRDYFFYYHEYNHD 257
Query: 217 FSLRNTG-SYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISP 41
F R+ G YS VPIV+ + +PY+ILFK+N +VQNGTL GPT++D FF +SP
Sbjct: 258 FECRSGGYPYSSDTRFVPIVK--SRGYVPYEILFKINHLVQNGTLSGPTVDDSFFRLVSP 315
Query: 40 CRVPINFIEYAL 5
VPI+ I+ AL
Sbjct: 316 AFVPIDHIKRAL 327
>ref|XP_015627028.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA
polymerase 1 [Oryza sativa Japonica Group]
Length = 1106
Score = 301 bits (772), Expect = 9e-91
Identities = 159/312 (50%), Positives = 212/312 (67%), Gaps = 4/312 (1%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYNALN-EMPQQYFYP 752
K+ LE G G+V+AVK+R+PK VT S+A+A+VQF T + A+ + NA ++ ++ Y
Sbjct: 21 KDLLERIVGCGNVYAVKLRHPKNVTATSRAYAIVQFQTEEHASLVKNAAQRKILRRGHY- 79
Query: 751 KTYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKI 572
YLKV RDIVP+PR S+F LED LH GCL+ E L LWS V V FGF++KKI
Sbjct: 80 --YLKVHPSDRDIVPRPRVSMFKLEDVTLHFGCLLKETILSALWSRKGVSVEFGFNLKKI 137
Query: 571 SFFLVQGNQS--YKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIH 398
F+L N S YKLELS+ESIW+IQ + P +++FL+IQV+AAP+IYE + S +++
Sbjct: 138 YFYLQLPNSSIEYKLELSHESIWEIQLQRPPKSQTKFLLIQVQAAPKIYEQTPRRSGVMY 197
Query: 397 EDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGH 218
EDP NYF++ DDQW RTTDFT S SIGQS+ +CLE+P C LP+ R YFFYY +
Sbjct: 198 EDPLFNYFRDHTDDQWTRTTDFTSSSSIGQSYILCLEVPRRCDLPNIRDYFFYYHEYNHD 257
Query: 217 FSLRNTG-SYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISP 41
F R+ G YS VPIV+ + +PY+ILFK+N +VQNGTL GPT++D FF +SP
Sbjct: 258 FECRSGGYPYSSDTRFVPIVK--SRGYVPYEILFKINHLVQNGTLSGPTVDDSFFRLVSP 315
Query: 40 CRVPINFIEYAL 5
VPI+ I+ AL
Sbjct: 316 AFVPIDHIKRAL 327
>gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare subsp. vulgare]
Length = 1115
Score = 301 bits (771), Expect = 1e-90
Identities = 152/308 (49%), Positives = 210/308 (68%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYNALNEMPQQYFYPK 749
K+ LE G G+VFAVK+R PK ++ S++FA+VQF + A+ + NA +
Sbjct: 21 KDLLEQIVGTGNVFAVKLRPPKNISANSRSFAIVQFQSEAHASLVLNAAQRNALRS--GS 78
Query: 748 TYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKIS 569
YLK +Y RDIVP+PR ++F L+ A LH GCL+ E L VLWS TDV V FGF MK+I
Sbjct: 79 HYLKARYAERDIVPRPRTTIFNLQGAKLHFGCLLKERVLSVLWSGTDVSVEFGFAMKRID 138
Query: 568 FFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIHEDP 389
F L+ ++ YKLELSYESIW+IQ P + +FL+IQV+AAP+IYE ++ S +++DP
Sbjct: 139 FCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQAAPKIYEQNIRLSGSMYDDP 198
Query: 388 SLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHFSL 209
NYF++ DDQW RTTDFTPS SIGQS+ + LELP+ C+LP+ R+YF YY+ F+L
Sbjct: 199 LFNYFRDDTDDQWTRTTDFTPSASIGQSYILSLELPHICYLPNIREYFVYYEVHNDIFNL 258
Query: 208 RNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPCRVP 29
+ SYS + VP+V+ +++PY+ILFK+N +VQNGTL GPTL+D F+ +SP
Sbjct: 259 QPGYSYSSNTCFVPVVKSHYFTDVPYEILFKINHLVQNGTLSGPTLDDNFYRLVSPGYER 318
Query: 28 INFIEYAL 5
I+ I+ AL
Sbjct: 319 IDRIKRAL 326
>ref|XP_010236147.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA
polymerase 1 [Brachypodium distachyon]
Length = 1117
Score = 301 bits (771), Expect = 1e-90
Identities = 163/312 (52%), Positives = 209/312 (66%), Gaps = 4/312 (1%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYNAL--NEMPQQYFY 755
K+ LE G G+V+AVK+R PK +T S++FA+VQF T + A+ + NA N + + +Y
Sbjct: 21 KDLLEQIVGAGNVYAVKLRPPKNITANSRSFAIVQFQTEEYASLVENAAXRNVLSTESYY 80
Query: 754 PKTYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKK 575
LKV+ RDIVP+PR ++F L A L CL+ E L VLWS TDV V FGFDMKK
Sbjct: 81 ----LKVRPAERDIVPRPRTAMFTLHGATLRFSCLLKENVLSVLWSGTDVSVEFGFDMKK 136
Query: 574 ISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQ--FLVIQVEAAPRIYEMPLQDSKII 401
I F+L + YKLELSYESIW+IQ P A RSQ FL+IQVEAAP+IYE+ + + +
Sbjct: 137 IYFYLEC--RKYKLELSYESIWEIQLHRPPAYRSQKKFLLIQVEAAPKIYELNQRRAGFM 194
Query: 400 HEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAG 221
EDP NYF++ DDQW RTTDFTPS SIGQSF +CLELPY+ LP R YF YY++
Sbjct: 195 FEDPLFNYFRDDTDDQWTRTTDFTPSASIGQSFILCLELPYHHDLPKIRDYFVYYEEHND 254
Query: 220 HFSLRNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISP 41
F R+ SYS VP V+ + ++PY+ILFK+N +VQNGTL GPTL+D FF +SP
Sbjct: 255 DFHCRSGHSYSCDTRFVPNVKSHHFIDVPYEILFKINHLVQNGTLSGPTLDDNFFRMVSP 314
Query: 40 CRVPINFIEYAL 5
V I+ I+ AL
Sbjct: 315 GFVSIDHIKRAL 326
>ref|XP_010917518.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X2
[Elaeis guineensis]
ref|XP_019704929.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X2
[Elaeis guineensis]
Length = 1075
Score = 299 bits (765), Expect = 6e-90
Identities = 146/249 (58%), Positives = 187/249 (75%)
Frame = -2
Query: 751 KTYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKI 572
K +L+V+ + RDIVPKPR SLF+LE+A LH G +S+ VLWS DV+V+FGF+++KI
Sbjct: 21 KAFLEVRDVERDIVPKPRTSLFILENATLHFGSPVSQNKFSVLWSAMDVKVNFGFNLRKI 80
Query: 571 SFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEAAPRIYEMPLQDSKIIHED 392
FFL +G SYK EL+YESIW+IQ S Q QFL+IQV AAP+IYE+ ++S ++ ED
Sbjct: 81 YFFLSRGGHSYKFELAYESIWEIQLHRSSTQHLQFLLIQVVAAPKIYELFPRNSGLLLED 140
Query: 391 PSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDFRKYFFYYKKVAGHFS 212
P NYFK+ DDQW+RTTDF+P CSIGQS A+CL+L Y+C LP+ R YF +YK+ GHF
Sbjct: 141 PIYNYFKDPPDDQWVRTTDFSPLCSIGQSSALCLQLSYDCDLPNIRDYFVFYKESEGHFD 200
Query: 211 LRNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGPTLNDKFFYFISPCRV 32
L SYS SL+LVPIVEP E+PYKILFK+N MVQNGTL GPTL++KFF +SP V
Sbjct: 201 LERGISYSCSLDLVPIVEPRPRIEVPYKILFKINHMVQNGTLFGPTLDEKFFRLVSPQYV 260
Query: 31 PINFIEYAL 5
I++IE A+
Sbjct: 261 RIDYIECAI 269
>ref|XP_020584589.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Phalaenopsis
equestris]
ref|XP_020584590.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Phalaenopsis
equestris]
Length = 1156
Score = 299 bits (766), Expect = 1e-89
Identities = 157/324 (48%), Positives = 211/324 (65%), Gaps = 16/324 (4%)
Frame = -2
Query: 928 KNFLENYTGDGSVFAVKVRYPKTVTTKSKAFAMVQFLTSKDANTIYNALNEMPQQYFYPK 749
K LE YTG+GSVFAVK+R+PK + + SKAFA+VQF++S A + + Q+ + K
Sbjct: 31 KECLEYYTGEGSVFAVKLRHPKVIKSTSKAFAIVQFISSTGATKVKYMTRQ--QRLCFEK 88
Query: 748 TYLKVQYMYRDIVPKPRKSLFVLEDAALHLGCLISEVTLGVLWSCTDVEVHFGFDMKKIS 569
+YL + + RDIVPKP + V+ED +H GC ISE L +LW+ D + FGF+++KIS
Sbjct: 89 SYLTSRDVERDIVPKPITASHVMEDVIVHFGCQISEKKLYILWTARDARIEFGFNLRKIS 148
Query: 568 FFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQ----------------VEAAPR 437
F + YKLELSYESIW+IQ AQR +FL IQ V+AAP+
Sbjct: 149 LFTSWEDCLYKLELSYESIWEIQLYHSVAQRCRFLQIQASRCDSLFLIWSTIRQVQAAPK 208
Query: 436 IYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYNCHLPDF 257
+Y MP Q+S I+E+P+LNY+K + D+QW+RTTDFTP CSIGQS ICL+LP LP+
Sbjct: 209 LYMMPSQNSFAIYENPALNYYKHSTDEQWLRTTDFTPQCSIGQSSTICLQLPIKSDLPNI 268
Query: 256 RKYFFYYKKVAGHFSLRNTGSYSGSLELVPIVEPWNASEIPYKILFKVNTMVQNGTLMGP 77
++ F Y+K+V + L N SYS LVPIV P N ++PYKILFK+N +VQNG L GP
Sbjct: 269 KENFVYFKEVDAYLDLVNGRSYSYDFHLVPIVSPPNGFKVPYKILFKINHLVQNGILSGP 328
Query: 76 TLNDKFFYFISPCRVPINFIEYAL 5
TL++ FF ++P I+ IE AL
Sbjct: 329 TLDETFFSLLNPFSKSIDLIERAL 352