BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00032944
         (364 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA65183.1| Pentatricopeptide repeat-containing protein [Apos...    50   2e-06
ref|XP_020686425.1| pentatricopeptide repeat-containing protein ...    51   4e-06
ref|XP_020686426.1| pentatricopeptide repeat-containing protein ...    51   4e-06
ref|XP_020686427.1| pentatricopeptide repeat-containing protein ...    51   4e-06
gb|PKU79412.1| Pentatricopeptide repeat-containing protein [Dend...    51   4e-06

>gb|PKA65183.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 380

 Score = 50.1 bits (118), Expect(2) = 2e-06
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 13/65 (20%)
 Frame = -2

Query: 156 YASTGMLDQALQTLA*IP---------NPTALLSACNHHPKLFRCVP----DLSKKHSIA 16
           Y + GM+D A++T+  +P         +  ALLSACNH   LFR VP    DL ++HS++
Sbjct: 83  YTNAGMIDHAIRTIDELPRLGSPRTTLSLNALLSACNHSKVLFRRVPDLLSDLFRRHSLS 142

Query: 15  PDKVS 1
           PD+VS
Sbjct: 143 PDEVS 147



 Score = 29.3 bits (64), Expect(2) = 2e-06
 Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 3/24 (12%)
 Frame = -1

Query: 274 HAFDPALRRL---QDFAAIQSLLE 212
           HAFDPA+RRL   + F+ I++LLE
Sbjct: 36  HAFDPAIRRLAKSRQFSEIEALLE 59


>ref|XP_020686425.1| pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial-like isoform X1 [Dendrobium catenatum]
          Length = 409

 Score = 50.8 bits (120), Expect(2) = 4e-06
 Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 13/65 (20%)
 Frame = -2

Query: 156 YASTGMLDQALQTLA*IP---------NPTALLSACNHHPKLFRCVPD----LSKKHSIA 16
           YAS GMLD A++TL  +P         +  ALLSACNH   L   VPD    LS+ HS++
Sbjct: 78  YASAGMLDHAVRTLDELPRLGSSRTILSLNALLSACNHSKTLSTRVPDLFSNLSRYHSLS 137

Query: 15  PDKVS 1
           PDK+S
Sbjct: 138 PDKIS 142



 Score = 27.3 bits (59), Expect(2) = 4e-06
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 3/24 (12%)
 Frame = -1

Query: 274 HAFDPALRRL---QDFAAIQSLLE 212
           HAFDP +RRL   Q F  I++LLE
Sbjct: 31  HAFDPEIRRLAKFQRFTDIEALLE 54


>ref|XP_020686426.1| pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial-like isoform X2 [Dendrobium catenatum]
          Length = 403

 Score = 50.8 bits (120), Expect(2) = 4e-06
 Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 13/65 (20%)
 Frame = -2

Query: 156 YASTGMLDQALQTLA*IP---------NPTALLSACNHHPKLFRCVPD----LSKKHSIA 16
           YAS GMLD A++TL  +P         +  ALLSACNH   L   VPD    LS+ HS++
Sbjct: 78  YASAGMLDHAVRTLDELPRLGSSRTILSLNALLSACNHSKTLSTRVPDLFSNLSRYHSLS 137

Query: 15  PDKVS 1
           PDK+S
Sbjct: 138 PDKIS 142



 Score = 27.3 bits (59), Expect(2) = 4e-06
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 3/24 (12%)
 Frame = -1

Query: 274 HAFDPALRRL---QDFAAIQSLLE 212
           HAFDP +RRL   Q F  I++LLE
Sbjct: 31  HAFDPEIRRLAKFQRFTDIEALLE 54


>ref|XP_020686427.1| pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial-like isoform X3 [Dendrobium catenatum]
          Length = 377

 Score = 50.8 bits (120), Expect(2) = 4e-06
 Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 13/65 (20%)
 Frame = -2

Query: 156 YASTGMLDQALQTLA*IP---------NPTALLSACNHHPKLFRCVPD----LSKKHSIA 16
           YAS GMLD A++TL  +P         +  ALLSACNH   L   VPD    LS+ HS++
Sbjct: 78  YASAGMLDHAVRTLDELPRLGSSRTILSLNALLSACNHSKTLSTRVPDLFSNLSRYHSLS 137

Query: 15  PDKVS 1
           PDK+S
Sbjct: 138 PDKIS 142



 Score = 27.3 bits (59), Expect(2) = 4e-06
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 3/24 (12%)
 Frame = -1

Query: 274 HAFDPALRRL---QDFAAIQSLLE 212
           HAFDP +RRL   Q F  I++LLE
Sbjct: 31  HAFDPEIRRLAKFQRFTDIEALLE 54


>gb|PKU79412.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 373

 Score = 50.8 bits (120), Expect(2) = 4e-06
 Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 13/65 (20%)
 Frame = -2

Query: 156 YASTGMLDQALQTLA*IP---------NPTALLSACNHHPKLFRCVPD----LSKKHSIA 16
           YAS GMLD A++TL  +P         +  ALLSACNH   L   VPD    LS+ HS++
Sbjct: 78  YASAGMLDHAVRTLDELPRLGSSRTILSLNALLSACNHSKTLSTRVPDLFSNLSRYHSLS 137

Query: 15  PDKVS 1
           PDK+S
Sbjct: 138 PDKIS 142



 Score = 27.3 bits (59), Expect(2) = 4e-06
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 3/24 (12%)
 Frame = -1

Query: 274 HAFDPALRRL---QDFAAIQSLLE 212
           HAFDP +RRL   Q F  I++LLE
Sbjct: 31  HAFDPEIRRLAKFQRFTDIEALLE 54