BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00031853
         (909 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020252754.1| pentatricopeptide repeat-containing protein ...    75   1e-14
ref|XP_008775031.1| PREDICTED: pentatricopeptide repeat-containi...    41   1e-06
ref|XP_010919700.1| PREDICTED: pentatricopeptide repeat-containi...    41   5e-06

>ref|XP_020252754.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial [Asparagus officinalis]
 ref|XP_020252755.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial [Asparagus officinalis]
 ref|XP_020252756.1| pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial [Asparagus officinalis]
 gb|ONK77107.1| uncharacterized protein A4U43_C02F3170 [Asparagus officinalis]
          Length = 824

 Score = 74.7 bits (182), Expect(2) = 1e-14
 Identities = 56/152 (36%), Positives = 68/152 (44%), Gaps = 1/152 (0%)
 Frame = -3

Query: 907 RIIRSSTSLNEWRSPRSIQNP-RPLCYSPSSNATSPNQSPNPRASETNRSLPNEITTPQF 731
           RI+RSS+S    R PR  QN  RP C S SSNA S +Q  N  A                
Sbjct: 2   RIVRSSSSPLYQRRPRFAQNTARPGC-SASSNAVSLDQFRNLTA---------------- 44

Query: 730 FQNNRNSIKFDALLTYSPQQKKRGSTAKSRG*EANLPSETPPIEEAHAIKFLLNNRRNPR 551
                                              L  + PPI E    +FLL+N+RNP+
Sbjct: 45  -----------------------------------LFVKKPPIREHQVTQFLLSNQRNPK 69

Query: 550 TALQYYKSVAMDGFFTLDSFCRLLHILVKGGR 455
           TAL+Y+KS   DGFF LD FC LLHIL++ GR
Sbjct: 70  TALRYFKSAVKDGFFALDPFCILLHILIRSGR 101



 Score = 34.3 bits (77), Expect(2) = 1e-14
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = -1

Query: 456 GLLSSVWELIMNTVLGISSLKGPGIFDRLVETSKR--ISFLALRLILTVMAIYTNIGANP 283
           G LSS  EL+ +++L  SS +   + D+LVETSKR    F   R   +V+  Y   G   
Sbjct: 100 GRLSSARELLKDSLLSDSSPEPSDVVDKLVETSKRCDFDFSHPRSFDSVLVCYARAGRVD 159

Query: 282 EAEKAFSSCIRD 247
            A   +   +R+
Sbjct: 160 NALLVYDLMVRN 171


>ref|XP_008775031.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial [Phoenix dactylifera]
 ref|XP_008775032.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial [Phoenix dactylifera]
          Length = 845

 Score = 41.2 bits (95), Expect(2) = 1e-06
 Identities = 26/68 (38%), Positives = 38/68 (55%)
 Frame = -1

Query: 456 GLLSSVWELIMNTVLGISSLKGPGIFDRLVETSKRISFLALRLILTVMAIYTNIGANPEA 277
           G LSS  EL+  ++LG SS +   I D L+ETSKR  F  L     +++ Y ++    EA
Sbjct: 122 GWLSSARELLKRSILGDSSTRPSSIVDCLIETSKRCDFDPLSYCY-LLSCYAHVHRVEEA 180

Query: 276 EKAFSSCI 253
            +AFS  +
Sbjct: 181 VEAFSRMV 188



 Score = 40.4 bits (93), Expect(2) = 1e-06
 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 2/152 (1%)
 Frame = -3

Query: 907 RIIRSSTSLNEWRSPRSIQN-PRPLCYSPSSNATSPNQSPNPRASETNRSLPNEITTPQF 731
           R + SS++L+  R PRSI+  PR L YS S+      + P   A    + +PN +     
Sbjct: 2   RALGSSSTLSP-RLPRSIRRIPRSL-YSASATLLPSIEEPTAAAE---KPIPNNVVHAHS 56

Query: 730 FQNNRNSIKFDALLTYSPQQKKRGSTAKSRG*EANLPSETPPIEEAHAIKFLLNNRRNPR 551
               R    FD   + S Q++                           ++FLL  +R PR
Sbjct: 57  PPIRRLISAFDPERSMSTQER--------------------------VVEFLLTYQRRPR 90

Query: 550 TALQYYKSVA-MDGFFTLDSFCRLLHILVKGG 458
            AL+Y+  V    G   ++  C LLHILV+ G
Sbjct: 91  EALKYFNWVQNQGGPMGVEPLCILLHILVRSG 122


>ref|XP_010919700.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial [Elaeis guineensis]
 ref|XP_010919778.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial [Elaeis guineensis]
          Length = 826

 Score = 41.2 bits (95), Expect(2) = 5e-06
 Identities = 26/70 (37%), Positives = 39/70 (55%)
 Frame = -1

Query: 456 GLLSSVWELIMNTVLGISSLKGPGIFDRLVETSKRISFLALRLILTVMAIYTNIGANPEA 277
           GLL S  EL+  ++LG S  +  GI D L+ETSKR  F  L     +++ Y ++    EA
Sbjct: 103 GLLLSARELLKRSILGDSVPRPSGIVDCLIETSKRCDFDPLSYCY-LLSCYAHVDRVEEA 161

Query: 276 EKAFSSCIRD 247
            +AFS  + +
Sbjct: 162 VEAFSRMVEN 171



 Score = 38.5 bits (88), Expect(2) = 5e-06
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = -3

Query: 598 EAHAIKFLLNNRRNPRTALQYYKSVAMDGFFT-LDSFCRLLHILVKGG 458
           +   ++FLL N+  PR AL+Y+  V   G  T ++  C L HILV+ G
Sbjct: 56  QKRVVEFLLTNQHRPREALKYFNWVENQGSPTGIEPLCILFHILVRSG 103