BLASTX nr result

ID: Ophiopogon22_contig00030360 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00030360
         (395 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF25532.1| conserved hypothetical protein [Ricinus communis]...    74   1e-14
dbj|GAV61910.1| hypothetical protein CFOL_v3_05435, partial [Cep...    57   2e-08
ref|YP_005090428.1| orf1 gene product (mitochondrion) [Dorcocera...    55   4e-06

>gb|EEF25532.1| conserved hypothetical protein [Ricinus communis]
 gb|EEF26949.1| conserved hypothetical protein [Ricinus communis]
          Length = 88

 Score = 73.9 bits (180), Expect = 1e-14
 Identities = 36/50 (72%), Positives = 43/50 (86%), Gaps = 2/50 (4%)
 Frame = -2

Query: 214 RAPALLAFFTGARQMYHSSRS*--GKESSVCFHCYGNELHMLVSNCSGIY 71
           ++ ALLAFFTGAR+MYHSSRS   GKESSVC++ YG+E HMLV NCSGI+
Sbjct: 39  KSSALLAFFTGARRMYHSSRSPRSGKESSVCYNLYGDESHMLVENCSGIH 88


>dbj|GAV61910.1| hypothetical protein CFOL_v3_05435, partial [Cephalotus
           follicularis]
          Length = 41

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 33/48 (68%)
 Frame = -2

Query: 214 RAPALLAFFTGARQMYHSSRS*GKESSVCFHCYGNELHMLVSNCSGIY 71
           ++ ALLAFFTGAR+MYHSSR            YGNE HMLV NCSGI+
Sbjct: 2   KSSALLAFFTGARRMYHSSRR--------IFFYGNESHMLVENCSGIH 41


>ref|YP_005090428.1| orf1 gene product (mitochondrion) [Dorcoceras hygrometricum]
 gb|AEK53322.1| hypothetical protein (mitochondrion) [Dorcoceras hygrometricum]
          Length = 331

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +1

Query: 70  HKFPNNSKPTYAIHSHNNENKQKTPYLRSGMSDTSGERQ 186
           ++F +NS+PT  IHS  + N QKTPYLRSGMSDTSG R+
Sbjct: 293 NEFQSNSQPTDVIHSRKDYNTQKTPYLRSGMSDTSGARR 331


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