BLASTX nr result

ID: Ophiopogon22_contig00030305 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00030305
         (406 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248636.1| translocase of chloroplast 120, chloroplasti...    81   5e-15
gb|PON33202.1| LRR domain containing protein [Trema orientalis]        58   5e-07

>ref|XP_020248636.1| translocase of chloroplast 120, chloroplastic [Asparagus
           officinalis]
 gb|ONK57100.1| uncharacterized protein A4U43_C10F16620 [Asparagus officinalis]
          Length = 1215

 Score = 80.9 bits (198), Expect = 5e-15
 Identities = 50/112 (44%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
 Frame = -3

Query: 362 ESAEESK------EENDVFEEAAMDSESFYTPASAPRHGASDSQESFYTPAYGHRASDSQ 201
           +S EESK      EEND FEEA +D                                  +
Sbjct: 52  DSVEESKGSVRGSEENDEFEEAELD----------------------------------R 77

Query: 200 ESFYTPAYRHRASDSQDSQETAFDAVESRDGFDGEDGDNPDREDGNLAGNSN 45
           ESFYTPAYRH  SDSQD QE  FD+VES DG DGEDGDN DRE   +  +SN
Sbjct: 78  ESFYTPAYRHMGSDSQDLQEADFDSVESADGVDGEDGDNQDREAKEVVDSSN 129


>gb|PON33202.1| LRR domain containing protein [Trema orientalis]
          Length = 752

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
 Frame = +2

Query: 11  PPQKQPLLSQHHSNYPPNSXXXXXXXXXXXXQSHRDSPPHQMPFPANPANQKPC------ 172
           P  + P++   HS  PP +            Q  +  PP   P P +P + KP       
Sbjct: 523 PSDRNPVVLHPHSPPPPQAPTPEHSPSPTPKQPAKSPPPSPKPSPKSPPSPKPSTHSPPP 582

Query: 173 AGKPACRSSPVNPKPGAHTPECKSSLE--------NQKPRDEAPTPACKSSPNPSPPPRT 328
           + KP+ +S P  PKP   +P      +         Q P   +P+P    SP+PSPPP++
Sbjct: 583 SPKPSPKSPPPPPKPSTESPPPSPKTDRPTSPPKSKQPPPSPSPSPPPSPSPSPSPPPKS 642

Query: 329 H 331
           +
Sbjct: 643 Y 643


Top