BLASTX nr result

ID: Ophiopogon22_contig00030147 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00030147
         (470 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010255062.1| PREDICTED: B3 domain-containing protein REM1...    56   3e-06
ref|XP_010089922.1| B3 domain-containing protein REM16 [Morus no...    56   3e-06

>ref|XP_010255062.1| PREDICTED: B3 domain-containing protein REM16-like [Nelumbo
           nucifera]
          Length = 397

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
 Frame = -3

Query: 273 NATSVGHKRKTRTETIWGSLNKIAERHIEKGDSSLHPCENPTYLIQLISSRRPVTDTEKD 94
           +AT +  KRK + E          E     GD  L    N  + I  +S RRPVT+ E  
Sbjct: 201 SATPLPAKRKPKRE----------EPADYSGDEELSESLNRAFHIHFLSKRRPVTEVEML 250

Query: 93  RAFELAS-AMELANPSFQAVMKTTHVYKRFFL 1
           R  ELA+ A+ L+  SF+ VM+ THVYKRF+L
Sbjct: 251 RTLELANEALVLSETSFKIVMQPTHVYKRFYL 282


>ref|XP_010089922.1| B3 domain-containing protein REM16 [Morus notabilis]
 ref|XP_024017087.1| B3 domain-containing protein REM16 [Morus notabilis]
 gb|EXB38618.1| B3 domain-containing protein REM16 [Morus notabilis]
          Length = 404

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = -3

Query: 192 IEKGDSSLHPCENPTYLIQLISSRRPVTDTEKDRAFELASA--MELANPSFQAVMKTTHV 19
           + K D+   P     Y +Q +S+RRP+T+ EKDRA +LA A   E  N     VMK T+V
Sbjct: 220 VTKSDAEHTPTRRRGYSMQYVSNRRPITEDEKDRAMKLAEAEISESNNEGLLVVMKPTYV 279

Query: 18  YKRFFL 1
           YKRF++
Sbjct: 280 YKRFYV 285


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