BLASTX nr result
ID: Ophiopogon22_contig00029858
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00029858
(453 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020268472.1| protein RRP6-like 2 [Asparagus officinalis] ... 117 2e-27
ref|XP_020105187.1| protein RRP6-like 2 [Ananas comosus] 85 4e-16
gb|OAY82313.1| Protein RRP6-like 2 [Ananas comosus] 85 4e-16
ref|XP_019704952.1| PREDICTED: protein RRP6-like 2 isoform X2 [E... 83 5e-16
ref|XP_010932653.1| PREDICTED: protein RRP6-like 2 isoform X2 [E... 84 9e-16
ref|XP_010932652.1| PREDICTED: protein RRP6-like 2 isoform X1 [E... 84 9e-16
ref|XP_010917841.1| PREDICTED: protein RRP6-like 2 [Elaeis guine... 81 6e-15
ref|XP_008789587.1| PREDICTED: protein RRP6-like 2 [Phoenix dact... 77 1e-13
gb|PKA57851.1| exosome complex exonuclease RRP6 [Apostasia shenz... 74 2e-12
ref|XP_009411299.1| PREDICTED: protein RRP6-like 2 isoform X2 [M... 71 2e-11
ref|XP_009411298.1| PREDICTED: protein RRP6-like 2 isoform X1 [M... 71 2e-11
ref|XP_015697475.1| PREDICTED: protein RRP6-like 2 [Oryza brachy... 68 3e-10
ref|XP_003573952.1| PREDICTED: protein RRP6-like 1 [Brachypodium... 66 1e-09
ref|XP_010677796.1| PREDICTED: protein RRP6-like 2 [Beta vulgari... 66 1e-09
ref|XP_021973362.1| protein RRP6-like 2 [Helianthus annuus] >gi|... 66 1e-09
gb|EEC67022.1| hypothetical protein OsI_33743 [Oryza sativa Indi... 65 2e-09
gb|EEE51013.1| hypothetical protein OsJ_31642 [Oryza sativa Japo... 65 2e-09
ref|XP_015614782.1| PREDICTED: protein RRP6-like 2 [Oryza sativa... 65 2e-09
gb|KDO66091.1| hypothetical protein CISIN_1g003416mg [Citrus sin... 64 4e-09
gb|KDO66089.1| hypothetical protein CISIN_1g003416mg [Citrus sin... 64 4e-09
>ref|XP_020268472.1| protein RRP6-like 2 [Asparagus officinalis]
gb|ONK68872.1| uncharacterized protein A4U43_C05F16920 [Asparagus officinalis]
Length = 906
Score = 117 bits (292), Expect = 2e-27
Identities = 58/86 (67%), Positives = 68/86 (79%)
Frame = -2
Query: 449 KKNGKQSQENEVKVQVKPFDYAAARKNINFTGVGEHDGDVGLDSNPMDSGEKRRASALGR 270
+KN + SQENEV++QVKPFDYAAAR+NI F GV EH D LD+NP +S EKR+ S GR
Sbjct: 821 EKNRRPSQENEVRIQVKPFDYAAARRNIEFGGVEEHFKDAELDNNPSESTEKRKGSDKGR 880
Query: 269 SNGEGGERGLRRQAFPPSGNRSTTYK 192
S+GE RGLRRQAFP SGNRST+YK
Sbjct: 881 SSGEERVRGLRRQAFPASGNRSTSYK 906
>ref|XP_020105187.1| protein RRP6-like 2 [Ananas comosus]
Length = 921
Score = 84.7 bits (208), Expect = 4e-16
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 10/95 (10%)
Frame = -2
Query: 449 KKNGKQSQENEVKVQVKPFDYAAARKNINFTGVGEHDG------DVGLDSNPMDSGEKRR 288
++N SQE +V Q+KPFDYAAARKNI F +GE+DG D G+ ++ +G+KR+
Sbjct: 826 QQNLSTSQEAQVTFQLKPFDYAAARKNIKFGNIGEYDGAKGDDDDDGVKASRDSAGDKRK 885
Query: 287 ASALGRSNGE----GGERGLRRQAFPPSGNRSTTY 195
+ +GR GE ++ RRQAFP SGNRSTTY
Sbjct: 886 GAPVGRGRGEEKGKSSQQPRRRQAFPLSGNRSTTY 920
>gb|OAY82313.1| Protein RRP6-like 2 [Ananas comosus]
Length = 937
Score = 84.7 bits (208), Expect = 4e-16
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 10/95 (10%)
Frame = -2
Query: 449 KKNGKQSQENEVKVQVKPFDYAAARKNINFTGVGEHDG------DVGLDSNPMDSGEKRR 288
++N SQE +V Q+KPFDYAAARKNI F +GE+DG D G+ ++ +G+KR+
Sbjct: 842 QQNLSTSQEAQVTFQLKPFDYAAARKNIKFGNIGEYDGAKGDDDDDGVKASRDSAGDKRK 901
Query: 287 ASALGRSNGE----GGERGLRRQAFPPSGNRSTTY 195
+ +GR GE ++ RRQAFP SGNRSTTY
Sbjct: 902 GAPVGRGRGEEKGKSSQQPRRRQAFPLSGNRSTTY 936
>ref|XP_019704952.1| PREDICTED: protein RRP6-like 2 isoform X2 [Elaeis guineensis]
Length = 331
Score = 83.2 bits (204), Expect = 5e-16
Identities = 50/91 (54%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Frame = -2
Query: 446 KNGKQSQENEVKVQVKPFDYAAARKNINFTGVGEHD---GDVGLDSNPMDSGEKRRASAL 276
+N K SQE EV Q+KPFDYAAARKN+ F VGE D D L ++ + SGE + A
Sbjct: 241 QNHKPSQEPEVNYQLKPFDYAAARKNMKFGEVGEKDIAESDNRLQTSSV-SGEMHKGLAS 299
Query: 275 GRSNGEGGERGL----RRQAFPPSGNRSTTY 195
G+S GE +G RRQAFPPSGNRSTTY
Sbjct: 300 GQSRGEEKVKGFQHPRRRQAFPPSGNRSTTY 330
>ref|XP_010932653.1| PREDICTED: protein RRP6-like 2 isoform X2 [Elaeis guineensis]
Length = 946
Score = 83.6 bits (205), Expect = 9e-16
Identities = 50/91 (54%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Frame = -2
Query: 446 KNGKQSQENEVKVQVKPFDYAAARKNINFTGVGEHD---GDVGLDSNPMDSGEKRRASAL 276
+N K SQE EV Q+KPFDYAAARKNI F V E D G+ GL + P DS E +
Sbjct: 856 QNQKPSQEPEVNYQLKPFDYAAARKNIKFGDVEEKDRAKGNDGLRTLP-DSREMHKGPVF 914
Query: 275 GRSNG----EGGERGLRRQAFPPSGNRSTTY 195
G+S G +G ++ RRQAFPPSGNRSTTY
Sbjct: 915 GQSGGKERLKGFQQSRRRQAFPPSGNRSTTY 945
>ref|XP_010932652.1| PREDICTED: protein RRP6-like 2 isoform X1 [Elaeis guineensis]
Length = 954
Score = 83.6 bits (205), Expect = 9e-16
Identities = 50/91 (54%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Frame = -2
Query: 446 KNGKQSQENEVKVQVKPFDYAAARKNINFTGVGEHD---GDVGLDSNPMDSGEKRRASAL 276
+N K SQE EV Q+KPFDYAAARKNI F V E D G+ GL + P DS E +
Sbjct: 864 QNQKPSQEPEVNYQLKPFDYAAARKNIKFGDVEEKDRAKGNDGLRTLP-DSREMHKGPVF 922
Query: 275 GRSNG----EGGERGLRRQAFPPSGNRSTTY 195
G+S G +G ++ RRQAFPPSGNRSTTY
Sbjct: 923 GQSGGKERLKGFQQSRRRQAFPPSGNRSTTY 953
>ref|XP_010917841.1| PREDICTED: protein RRP6-like 2 [Elaeis guineensis]
Length = 946
Score = 81.3 bits (199), Expect = 6e-15
Identities = 49/92 (53%), Positives = 59/92 (64%), Gaps = 7/92 (7%)
Frame = -2
Query: 449 KKNGKQSQENEVKVQVKPFDYAAARKNINFTGVGEHD---GDVGLDSNPMDSGEKRRASA 279
++N K SQE EV Q+KPFDYAAARKN+ F VG D D L ++ + SGE + A
Sbjct: 855 RQNHKPSQEPEVNYQLKPFDYAAARKNMKFGEVGGKDIAESDNRLQTSSV-SGETHKGLA 913
Query: 278 LGRSNGEGGERGL----RRQAFPPSGNRSTTY 195
G+S GE +G RRQAFPPSGNRSTTY
Sbjct: 914 SGQSRGEEKVKGFQHPRRRQAFPPSGNRSTTY 945
>ref|XP_008789587.1| PREDICTED: protein RRP6-like 2 [Phoenix dactylifera]
Length = 945
Score = 77.4 bits (189), Expect = 1e-13
Identities = 46/86 (53%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Frame = -2
Query: 437 KQSQENEVKVQVKPFDYAAARKNINFTGVGEHDGDVGLDSNPM--DSGEKRRASALGRSN 264
+ S E +V Q+KPF+YAAARKN+ VGE D D P DSGE R+ S G+S
Sbjct: 859 RPSPEPDVNHQLKPFNYAAARKNMKVGEVGEKDRAESDDRLPTLPDSGELRKGSMFGQSR 918
Query: 263 GE---GGERGLRRQAFPPSGNRSTTY 195
GE G + RRQAFPPSGNRSTTY
Sbjct: 919 GEEVKGLQHPRRRQAFPPSGNRSTTY 944
>gb|PKA57851.1| exosome complex exonuclease RRP6 [Apostasia shenzhenica]
Length = 891
Score = 73.9 bits (180), Expect = 2e-12
Identities = 45/92 (48%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Frame = -2
Query: 449 KKNGKQSQENEVKVQVKPFDYAAARKNINFTGVGEHDGDVGLDSNPMDSGEKR---RASA 279
+ N + QE + QV PFDY AARK + F GE DG +S MD + R + +
Sbjct: 800 RTNRRPPQEPQQNPQVIPFDYTAARKTVKFGEDGEEDGGEDGESR-MDLSKSRGPSKGAV 858
Query: 278 LGRSNGEGGERG---LRRQAFPPSGNRSTTYK 192
+SNGE ERG LRRQAFPPSGNRSTTY+
Sbjct: 859 SSKSNGERLERGRQPLRRQAFPPSGNRSTTYR 890
>ref|XP_009411299.1| PREDICTED: protein RRP6-like 2 isoform X2 [Musa acuminata subsp.
malaccensis]
Length = 943
Score = 70.9 bits (172), Expect = 2e-11
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Frame = -2
Query: 449 KKNGKQSQENEVKVQVKPFDYAAARKNINFTGVGEHDGDVG--LDSNPMDSGEKRRAS-- 282
++N K Q+ E+ +KPF+YAAARKN+ F G+ + + ++P DS + RAS
Sbjct: 855 QRNQKSFQKPEINFNLKPFNYAAARKNVKFDDDGDDETKTEDRIKTSP-DSRQMHRASGQ 913
Query: 281 ALGRSNGEGGERGLRRQAFPPSGNRSTTY 195
A G G ++ RRQAFPPSGNRSTTY
Sbjct: 914 AQGDERSRGSQQARRRQAFPPSGNRSTTY 942
>ref|XP_009411298.1| PREDICTED: protein RRP6-like 2 isoform X1 [Musa acuminata subsp.
malaccensis]
Length = 952
Score = 70.9 bits (172), Expect = 2e-11
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Frame = -2
Query: 449 KKNGKQSQENEVKVQVKPFDYAAARKNINFTGVGEHDGDVG--LDSNPMDSGEKRRAS-- 282
++N K Q+ E+ +KPF+YAAARKN+ F G+ + + ++P DS + RAS
Sbjct: 864 QRNQKSFQKPEINFNLKPFNYAAARKNVKFDDDGDDETKTEDRIKTSP-DSRQMHRASGQ 922
Query: 281 ALGRSNGEGGERGLRRQAFPPSGNRSTTY 195
A G G ++ RRQAFPPSGNRSTTY
Sbjct: 923 AQGDERSRGSQQARRRQAFPPSGNRSTTY 951
>ref|XP_015697475.1| PREDICTED: protein RRP6-like 2 [Oryza brachyantha]
Length = 895
Score = 67.8 bits (164), Expect = 3e-10
Identities = 41/94 (43%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Frame = -2
Query: 452 YKKNGKQSQENEVKVQVKPFDYAAARKNINFTGVGEHDGD--------VGLDSNPMDSGE 297
+++N K QE E Q+KPFDYA ARKNI+F GEH + ++ N D G+
Sbjct: 805 FQQNHKPHQEPEFNHQLKPFDYAEARKNISF---GEHKAERTRDNAVARAINKNSGDKGK 861
Query: 296 KRRASALGRSNGEGGERGLRRQAFPPSGNRSTTY 195
G S G G+ RRQAFP SGNRS TY
Sbjct: 862 SSNQFEAGESEG-SGQNPRRRQAFPSSGNRSATY 894
>ref|XP_003573952.1| PREDICTED: protein RRP6-like 1 [Brachypodium distachyon]
gb|KQJ96813.1| hypothetical protein BRADI_3g27252v3 [Brachypodium distachyon]
Length = 906
Score = 66.2 bits (160), Expect = 1e-09
Identities = 45/90 (50%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Frame = -2
Query: 449 KKNGKQSQENEVKVQVKPFDYAAARKNINFTGVGEH---DGDVGLDSNPMDSGEKRRASA 279
++N K +E E Q+KPFDYA ARKNI+F V D V N DSG+KRR S
Sbjct: 817 QQNHKALEEPEFHDQLKPFDYAEARKNISFGEVKSERRKDNAVARAIN-KDSGDKRRTSK 875
Query: 278 L-GRSNGEGG-ERGLRRQAFPPSGNRSTTY 195
G EG + RRQAFPPSGNRS TY
Sbjct: 876 QPGGEEDEGDFQNPRRRQAFPPSGNRSATY 905
>ref|XP_010677796.1| PREDICTED: protein RRP6-like 2 [Beta vulgaris subsp. vulgaris]
gb|KMT11295.1| hypothetical protein BVRB_5g109790 [Beta vulgaris subsp. vulgaris]
Length = 963
Score = 66.2 bits (160), Expect = 1e-09
Identities = 35/82 (42%), Positives = 50/82 (60%)
Frame = -2
Query: 437 KQSQENEVKVQVKPFDYAAARKNINFTGVGEHDGDVGLDSNPMDSGEKRRASALGRSNGE 258
K+ E +Q KPFDY AARK +NF GV + + G D++ G+K+ + +++ E
Sbjct: 883 KKDSEETCSLQFKPFDYEAARKEVNFQGVAQKESKSG-DNDNNRFGKKKVVTDRSKNDEE 941
Query: 257 GGERGLRRQAFPPSGNRSTTYK 192
+G RRQAFP SGNRS T+K
Sbjct: 942 LLPQGKRRQAFPASGNRSATFK 963
>ref|XP_021973362.1| protein RRP6-like 2 [Helianthus annuus]
gb|OTG20808.1| hypothetical protein HannXRQ_Chr07g0197171 [Helianthus annuus]
Length = 887
Score = 65.9 bits (159), Expect = 1e-09
Identities = 39/81 (48%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Frame = -2
Query: 410 VQVKPFDYAAARKNINF--TGVGEHDGDVGLDSNPMDSGEKRRASALGRSNGEGGER--- 246
V+VKPFDYAAARK F G G+ DGD G G K+ GR GGER
Sbjct: 809 VEVKPFDYAAARKEGRFGEEGSGDEDGDGGKSKG--KGGRKKAGGGGGRKESAGGERSGD 866
Query: 245 ---GLRRQAFPPSGNRSTTYK 192
G RRQAFP +GNRS+T++
Sbjct: 867 FQMGRRRQAFPATGNRSSTFR 887
>gb|EEC67022.1| hypothetical protein OsI_33743 [Oryza sativa Indica Group]
Length = 854
Score = 65.5 bits (158), Expect = 2e-09
Identities = 44/92 (47%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Frame = -2
Query: 449 KKNGKQSQENEVKVQVKPFDYAAARKNINFTGVGEHDGDVGLDSN-----PMDSGEKRRA 285
++N K QE E Q+KPFDYA ARKNI F GE + D+ DSG+K R
Sbjct: 765 QQNHKPHQEPEFNHQLKPFDYAEARKNITF---GERKAERIKDNAVARAINKDSGDKGRT 821
Query: 284 S-ALGRSNGEGGERGLR-RQAFPPSGNRSTTY 195
S G EG + R RQAFPPSGNRS TY
Sbjct: 822 SNQFGAGENEGNRQNPRGRQAFPPSGNRSATY 853
>gb|EEE51013.1| hypothetical protein OsJ_31642 [Oryza sativa Japonica Group]
Length = 877
Score = 65.5 bits (158), Expect = 2e-09
Identities = 44/92 (47%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Frame = -2
Query: 449 KKNGKQSQENEVKVQVKPFDYAAARKNINFTGVGEHDGDVGLDSN-----PMDSGEKRRA 285
++N K QE E Q+KPFDYA ARKNI F GE + D+ DSG+K R
Sbjct: 788 QQNHKPHQEPEFNHQLKPFDYAEARKNITF---GERKAERIKDNAVARAINKDSGDKGRT 844
Query: 284 S-ALGRSNGEGGERGLR-RQAFPPSGNRSTTY 195
S G EG + R RQAFPPSGNRS TY
Sbjct: 845 SNQFGAGENEGNRQNPRGRQAFPPSGNRSATY 876
>ref|XP_015614782.1| PREDICTED: protein RRP6-like 2 [Oryza sativa Japonica Group]
gb|AAP53938.2| Nucleolar protein, putative, expressed [Oryza sativa Japonica Group]
Length = 902
Score = 65.5 bits (158), Expect = 2e-09
Identities = 44/92 (47%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Frame = -2
Query: 449 KKNGKQSQENEVKVQVKPFDYAAARKNINFTGVGEHDGDVGLDSN-----PMDSGEKRRA 285
++N K QE E Q+KPFDYA ARKNI F GE + D+ DSG+K R
Sbjct: 813 QQNHKPHQEPEFNHQLKPFDYAEARKNITF---GERKAERIKDNAVARAINKDSGDKGRT 869
Query: 284 S-ALGRSNGEGGERGLR-RQAFPPSGNRSTTY 195
S G EG + R RQAFPPSGNRS TY
Sbjct: 870 SNQFGAGENEGNRQNPRGRQAFPPSGNRSATY 901
>gb|KDO66091.1| hypothetical protein CISIN_1g003416mg [Citrus sinensis]
Length = 528
Score = 64.3 bits (155), Expect = 4e-09
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 9/95 (9%)
Frame = -2
Query: 449 KKNGK--QSQENEVKVQVKPFDYAAARKNINFTGVGEHDGDVGLDSN---PMDSGEKRRA 285
+K GK +S+E +Q+KPFD+ AARK I F G + G+D N P++SG+K++
Sbjct: 435 RKPGKPERSEEPSGFLQLKPFDFEAARKQIEF-GEDAKEKSAGVDGNKRKPVNSGDKKKV 493
Query: 284 SALGRSNGEGG----ERGLRRQAFPPSGNRSTTYK 192
SA+ ++ + G +G RR AFP +GNRS T++
Sbjct: 494 SAVDQAQKDDGTKELSQGRRRSAFPATGNRSATFR 528
>gb|KDO66089.1| hypothetical protein CISIN_1g003416mg [Citrus sinensis]
Length = 649
Score = 64.3 bits (155), Expect = 4e-09
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 9/95 (9%)
Frame = -2
Query: 449 KKNGK--QSQENEVKVQVKPFDYAAARKNINFTGVGEHDGDVGLDSN---PMDSGEKRRA 285
+K GK +S+E +Q+KPFD+ AARK I F G + G+D N P++SG+K++
Sbjct: 556 RKPGKPERSEEPSGFLQLKPFDFEAARKQIEF-GEDAKEKSAGVDGNKRKPVNSGDKKKV 614
Query: 284 SALGRSNGEGG----ERGLRRQAFPPSGNRSTTYK 192
SA+ ++ + G +G RR AFP +GNRS T++
Sbjct: 615 SAVDQAQKDDGTKELSQGRRRSAFPATGNRSATFR 649